GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002277-TA|BGIBMGA002277-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (108 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    31   0.002
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    31   0.003
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    29   0.008
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    29   0.008
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    28   0.024
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    27   0.042
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.17 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   0.91 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   0.91 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   0.91 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   2.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   4.8  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    19   8.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 31.5 bits (68), Expect = 0.002
 Identities = 12/23 (52%), Positives = 18/23 (78%)

Query: 20  NSAFNPIIYSIFNTEFREAFKKI 42
           NSA NPI+Y+I +++FR  F K+
Sbjct: 345 NSAVNPILYNIISSKFRSGFFKL 367


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 0.003
 Identities = 11/22 (50%), Positives = 17/22 (77%)

Query: 18  YSNSAFNPIIYSIFNTEFREAF 39
           Y NSA NPI+Y++ +++FR  F
Sbjct: 341 YLNSAINPILYNLMSSKFRTGF 362


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 0.008
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 11  KILTWLGYSNSAFNPIIYSIFNTEFREAFKKI 42
           K L     +NS  NP++Y +FN   R   +K+
Sbjct: 314 KALFLFACTNSCMNPVVYGVFNIRARRTGRKV 345


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 29.5 bits (63), Expect = 0.008
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 11  KILTWLGYSNSAFNPIIYSIFNTEFREAFKKI 42
           K L     +NS  NP++Y +FN   R   +K+
Sbjct: 314 KALFLFACTNSCMNPVVYGVFNIRARRTGRKV 345


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 0.024
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query: 20  NSAFNPIIYSIFNTEF 35
           NSA NPIIY +F+T F
Sbjct: 299 NSAANPIIYCLFSTHF 314


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 27.1 bits (57), Expect = 0.042
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 4   PFPD-LAFKILTWLGYSNSAFNPIIYSIFNTE 34
           PF D   F ILT L   NS  NP IY  FN E
Sbjct: 294 PFIDGPVFVILTLLYSLNSCVNPWIYLAFNRE 325


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.0 bits (52), Expect = 0.17
 Identities = 9/14 (64%), Positives = 12/14 (85%)

Query: 20  NSAFNPIIYSIFNT 33
           NSA NP+IY +F+T
Sbjct: 334 NSAANPVIYCLFST 347


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 0.91
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 14  TWLGYSNSAFNPIIYSIFNTEFREAFKKIL 43
           T L Y NS F PI +  +N  ++   + +L
Sbjct: 86  TNLDYGNSNFPPINHQNYNEPYQRTHENML 115


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 0.91
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 14  TWLGYSNSAFNPIIYSIFNTEFREAFKKIL 43
           T L Y NS F PI +  +N  ++   + +L
Sbjct: 86  TNLDYGNSNFPPINHQNYNEPYQRTHENML 115


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 0.91
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 14  TWLGYSNSAFNPIIYSIFNTEFREAFKKIL 43
           T L Y NS F PI +  +N  ++   + +L
Sbjct: 86  TNLDYGNSNFPPINHQNYNEPYQRTHENML 115


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 27  IYSIFNTEFREAFKKILTSR 46
           I SIF    R+ F K+LTS+
Sbjct: 196 IVSIFPDSARKPFFKLLTSK 215


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 62  TRNDNFVTDYGTKTLVVRRSGSLGL 86
           T  DNF   Y  +  V+ R   LG+
Sbjct: 311 TIKDNFPRFYAARFFVINRGTILGI 335


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 62  TRNDNFVTDYGTKTLVVRRSGSLGL 86
           T  DNF   Y  +  V+ R   LG+
Sbjct: 311 TIKDNFPRFYAARFFVINRGTILGI 335


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 17  GYSNSAFNPIIYSIFNTEFREAFKKI 42
           G+S + F PI YS+  +E +    KI
Sbjct: 694 GFSAAGFFPIDYSLVFSETKLLLFKI 719


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 82  GSLGLSGVDPTPRSSAESVR 101
           GS+GL G DP     A + R
Sbjct: 153 GSVGLVGGDPASSPGAAAGR 172


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,752
Number of Sequences: 317
Number of extensions: 1028
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 108
length of database: 114,650
effective HSP length: 49
effective length of query: 59
effective length of database: 99,117
effective search space:  5847903
effective search space used:  5847903
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)