GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002276-TA|BGIBMGA002276-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (72 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   0.15 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    26   0.15 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   0.26 
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   0.26 
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   0.35 
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   0.35 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   0.60 
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   0.80 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   1.4  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    22   1.8  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    22   2.4  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   2.4  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    21   3.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   3.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    21   4.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    20   7.4  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    20   9.8  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 0.15
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 35  IIMGVFLLCWVPFFCVNIVAAF 56
           +I+ VF+LCW P+   +++  F
Sbjct: 458 VIVIVFVLCWSPYIIFDLLQVF 479


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.15
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 39  VFLLCWVPFFCVNIVAAF 56
           VFLLC +P   +NIV AF
Sbjct: 319 VFLLCNLPAMMINIVEAF 336


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 6/22 (27%), Positives = 15/22 (68%)

Query: 35  IIMGVFLLCWVPFFCVNIVAAF 56
           +I+  F++CW P++ + ++  F
Sbjct: 420 VIVVAFVVCWTPYYIMMLIFMF 441


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 6/22 (27%), Positives = 15/22 (68%)

Query: 35  IIMGVFLLCWVPFFCVNIVAAF 56
           +I+  F++CW P++ + ++  F
Sbjct: 421 VIVVAFVVCWTPYYIMMLIFMF 442


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 7/22 (31%), Positives = 18/22 (81%), Gaps = 1/22 (4%)

Query: 31  ITVGIIMGVFLLCWVPFFCVNI 52
           +T+ I++ VF++CW P++ +++
Sbjct: 269 MTIMIVI-VFVVCWTPYYVMSL 289


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 7/22 (31%), Positives = 18/22 (81%), Gaps = 1/22 (4%)

Query: 31  ITVGIIMGVFLLCWVPFFCVNI 52
           +T+ I++ VF++CW P++ +++
Sbjct: 269 MTIMIVI-VFVVCWTPYYVMSL 289


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 4   NRTKSVRTRVHTHVHSSPYHVSDHKAAITVGIIMGVFLLCWVPFFCVNI 52
           N T ++R R +   H            +T+ I++ VF+ CW P+  + +
Sbjct: 283 NSTGTMRLRCNDLTHIE--RARQRTLRLTITIVV-VFVWCWTPYVVMTL 328


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 7/22 (31%), Positives = 15/22 (68%)

Query: 35  IIMGVFLLCWVPFFCVNIVAAF 56
           I++ +F +CW+PF    I+ ++
Sbjct: 301 IVVIIFAVCWLPFQIYFILTSY 322


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 3/20 (15%)

Query: 28  KAAITVGIIMGVFLLCWVPF 47
           K  +TV I   VF +CW+PF
Sbjct: 489 KMMVTVVI---VFTICWLPF 505


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query: 36  IMGVFLLCWVPFFCVNIV 53
           ++  F +CW PF    +V
Sbjct: 273 VVVAFFICWAPFHAQRLV 290


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 13  VHTHVHSSPYHVSDHKAAITVG 34
           VH  V S  YHV   K+ +  G
Sbjct: 372 VHLRVASKDYHVPGTKSVLEAG 393


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein
          protein.
          Length = 1036

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 28 KAAITVGIIMGVFLLCWVPFFCVNIVA 54
          K+AI  GI++G+   C +   C N+++
Sbjct: 43 KSAIVAGIVLGMGGNCKLLSRCDNVIS 69


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
          protein AgamOBP11 protein.
          Length = 192

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 46 PFFCVNIVAAFC 57
          PF C+ IVAA C
Sbjct: 4  PFVCILIVAAGC 15


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 1/17 (5%)

Query: 49  CV-NIVAAFCKTCIPGH 64
           C+ N     C  C+PGH
Sbjct: 854 CIHNTAGPHCDQCLPGH 870



 Score = 20.2 bits (40), Expect = 7.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 56  FCKTCIPGH 64
           FC++C PG+
Sbjct: 703 FCESCAPGY 711


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 16  HVHSSPYHVS 25
           H H SP+HVS
Sbjct: 473 HSHHSPHHVS 482


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 26  DHKAAITVGIIMGVFLLCWVPFFC 49
           DH  ++ +GI+   F+    P  C
Sbjct: 663 DHAHSLAIGIVKRAFMHLGCPHGC 686


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
          carbonic anhydrase protein.
          Length = 318

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 2  PDNRTKSVRTRVHTHVHSSPYHVSDHKA 29
          PD R  S   +     H SP  +  H+A
Sbjct: 40 PDQRRWSKAHQSCAGAHQSPIAIHSHRA 67


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.332    0.140    0.475 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,398
Number of Sequences: 2123
Number of extensions: 2534
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of query: 72
length of database: 516,269
effective HSP length: 50
effective length of query: 22
effective length of database: 410,119
effective search space:  9022618
effective search space used:  9022618
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.5 bits)
S2: 39 (19.8 bits)