GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002275-TA|BGIBMGA002275-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (143 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    55   2e-10
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    52   3e-09
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    36   1e-04
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    26   0.11 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   0.80 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   7.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   9.9  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 55.2 bits (127), Expect = 2e-10
 Identities = 33/142 (23%), Positives = 63/142 (44%)

Query: 1   MLVAAAVMTFAGVNDLLGYWVFGEQFCDTWVACDVMCSTASILNLCAISLDRYIHIKDPL 60
           +L+         VN     WV G + C      ++  + AS+L + AIS +RY  I  PL
Sbjct: 117 VLLVCTPTVLVEVNSRPETWVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPL 176

Query: 61  RYGRWVTRRVAITTIAMIWLLAALVSFLPISLGLHRPDEEALATQRPPKYPTCALVLTPT 120
           + G   T+  A     + W +AAL +   + +  ++  +    ++ P  +       +  
Sbjct: 177 KAGYICTKTRASLICLLAWFIAALFTSPMLVIAEYKQLDYFDGSKVPACHTLANTFWSAL 236

Query: 121 YAVVSSCISFILPCIVMISIYC 142
           Y +    + FI+P I+++ +YC
Sbjct: 237 YFLTIIFLFFIIPLIILLILYC 258


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 51.6 bits (118), Expect = 3e-09
 Identities = 35/141 (24%), Positives = 61/141 (43%)

Query: 1   MLVAAAVMTFAGVNDLLGYWVFGEQFCDTWVACDVMCSTASILNLCAISLDRYIHIKDPL 60
           +L+         VN     WV G + C      ++  + AS+L + AIS +RY  I  PL
Sbjct: 117 VLLVCTPTVLVEVNSRPETWVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPL 176

Query: 61  RYGRWVTRRVAITTIAMIWLLAALVSFLPISLGLHRPDEEALATQRPPKYPTCALVLTPT 120
           + G   T+  A     + W +AAL +   +++  + P+E    +     +      L   
Sbjct: 177 KAGYICTKTRASLICLLAWFIAALFTSPILAITQYGPEEYVDGSIVFVCFSLVEDTLPCV 236

Query: 121 YAVVSSCISFILPCIVMISIY 141
           + + S  I FI P  ++I +Y
Sbjct: 237 FFLGSILIFFIFPLAILIIVY 257


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 36.3 bits (80), Expect = 1e-04
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 20  WVFGEQFCDTWVACDVMCSTASILNLCAISLDRYIHIKDPLRY-GRWVTRRVAITTIAMI 78
           W  G   C       V+ + AS   L A+S+DRY  I+ P+++ G W   R  I      
Sbjct: 90  WYAGNVACKVIRFLQVVVTYASTYVLVALSIDRYDAIRHPMKFSGSWKRARYLILA---A 146

Query: 79  WLLAALVSFLPI 90
           W  +AL S LPI
Sbjct: 147 WFFSALYS-LPI 157


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 45  LCAISLDRYIHIKDPLRYGRWVTRRVAITTIAMIWLLAALVSFLP 89
           L A ++DR+  I  PL Y  W +RR  +  + + W +A+L   +P
Sbjct: 131 LMATAIDRHQAICYPLTYCSWTSRRSKV-MVYLAW-VASLAFCIP 173


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 0.80
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 109 KYPTCALVLTPTYAVVSSCISFI 131
           +YP C     P++A +  C S+I
Sbjct: 51  QYPGCVPKPIPSFACIGRCASYI 73


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 102 LATQRPPKYPTCALVLTPTY 121
           L T R PK+     +LTP +
Sbjct: 115 LLTSRGPKWQNRRKILTPAF 134


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 117 LTPTYAVVSSCISFIL 132
           L+P   +V +C+ F+L
Sbjct: 59  LSPMRLIVQTCLDFLL 74


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.140    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,678
Number of Sequences: 317
Number of extensions: 1366
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 143
length of database: 114,650
effective HSP length: 51
effective length of query: 92
effective length of database: 98,483
effective search space:  9060436
effective search space used:  9060436
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.5 bits)
S2: 39 (19.8 bits)