GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002274-TA|BGIBMGA002274-PA|undefined
         (63 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071132-1|AAL48754.1|  678|Drosophila melanogaster RE17513p pro...    26   5.7  
AE014297-1027|AAF54441.1|  678|Drosophila melanogaster CG8412-PA...    26   5.7  
BT010319-1|AAQ23637.1|  456|Drosophila melanogaster AT01345p pro...    25   9.9  
AY058330-1|AAL13559.1|  456|Drosophila melanogaster GH10272p pro...    25   9.9  
AE013599-436|AAF59240.1|  456|Drosophila melanogaster CG12736-PA...    25   9.9  

>AY071132-1|AAL48754.1|  678|Drosophila melanogaster RE17513p
           protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 16  SIHVSNLAIQAGIHIVMFMNH 36
           S+H+SNLA Q+G+   M +N+
Sbjct: 379 SVHISNLAAQSGVSRFMEINN 399


>AE014297-1027|AAF54441.1|  678|Drosophila melanogaster CG8412-PA
           protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 16  SIHVSNLAIQAGIHIVMFMNH 36
           S+H+SNLA Q+G+   M +N+
Sbjct: 379 SVHISNLAAQSGVSRFMEINN 399


>BT010319-1|AAQ23637.1|  456|Drosophila melanogaster AT01345p
           protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 22  LAIQAGIH-IVMFMNHGDLTSGDAKAHSRLEQKRKVADIG 60
           LA Q GI  I++F+N  DL   +      +E +  ++D G
Sbjct: 167 LAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDFG 206


>AY058330-1|AAL13559.1|  456|Drosophila melanogaster GH10272p
           protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 22  LAIQAGIH-IVMFMNHGDLTSGDAKAHSRLEQKRKVADIG 60
           LA Q GI  I++F+N  DL   +      +E +  ++D G
Sbjct: 167 LAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDFG 206


>AE013599-436|AAF59240.1|  456|Drosophila melanogaster CG12736-PA
           protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 22  LAIQAGIH-IVMFMNHGDLTSGDAKAHSRLEQKRKVADIG 60
           LA Q GI  I++F+N  DL   +      +E +  ++D G
Sbjct: 167 LAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDFG 206


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.132    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,509,882
Number of Sequences: 52641
Number of extensions: 65782
Number of successful extensions: 123
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 121
Number of HSP's gapped (non-prelim): 5
length of query: 63
length of database: 24,830,863
effective HSP length: 43
effective length of query: 20
effective length of database: 22,567,300
effective search space: 451346000
effective search space used: 451346000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)