GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002273-TA|BGIBMGA002273-PA|undefined
         (894 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.99 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   1.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   1.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 40  SQVVLAKQLLEEKCELEADKISNFKQALEWLICAT 74
           S V    QL+E K E+ A ++ N   AL + IC +
Sbjct: 326 SVVASVLQLMENKIEITACRLFNIDNALLFAICGS 360


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 339 FIDFRKWSGLF--LRYSDGNLQPDESENLFVRNNLGPFIQFFVALFVNLFLYPFIATQWV 396
           F D  KW  L   L+Y D  L+  +S    +  N+   +QFFV + + +    F+A  W+
Sbjct: 101 FCDPAKWIRLNNNLQYIDEVLKNRDSHETNLLRNVS--VQFFVYVILYILATVFLAYVWI 158


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 339 FIDFRKWSGLF--LRYSDGNLQPDESENLFVRNNLGPFIQFFVALFVNLFLYPFIATQWV 396
           F D  KW  L   L+Y D  L+  +S    +  N+   +QFFV + + +    F+A  W+
Sbjct: 101 FCDPAKWIRLNNNLQYIDEVLKNRDSHETNLLRNVS--VQFFVYVILYILATVFLAYVWI 158


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,916
Number of Sequences: 317
Number of extensions: 9342
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 3
length of query: 894
length of database: 114,650
effective HSP length: 63
effective length of query: 831
effective length of database: 94,679
effective search space: 78678249
effective search space used: 78678249
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 47 (23.0 bits)