Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002272-TA|BGIBMGA002272-PA|IPR002401|E-class P450, group
I, IPR001128|Cytochrome P450, IPR002048|Calcium-binding EF-hand
(510 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 64 6e-11
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 46 9e-06
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 28 3.5
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 4.7
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 27 6.2
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 27 6.2
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 27 6.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 6.2
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 27 6.2
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 27 8.2
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 27 8.2
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 63.7 bits (148), Expect = 6e-11
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 61 VFGGYDTTSCTLTYVLMNLGTYQDVQQKMYEEIKNVF-GDSERDVESDDLSKLVYTEAVI 119
+F D TS +T++ L + DV QK+ EE + GD + + D + K+ YT AV+
Sbjct: 317 LFASQDATSSAMTWLFQLLADHPDVLQKVREEQLRIRKGDIDVPLSLDLMEKMTYTRAVV 376
Query: 120 KESLRLYPIAPIIFRELDQDVKIN-NYTLKAGRGCAINVYGINRHAMWGDDADKFRPERW 178
KE LRL P ++ + + I +YT+ +YG + + + F P+RW
Sbjct: 377 KECLRLRPPVLMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALHDSKVYPEPETFNPDRW 436
Query: 179 LEPDGVPSVY-YAFATFGVGKRACIGTAFGV 208
P+G+ + FG G C+G + V
Sbjct: 437 -APNGLAEQSPKNWMVFGNGPHVCLGQRYAV 466
Score = 45.6 bits (103), Expect = 2e-05
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 308 TDQEIREEVDTAIMAGFDTSSWILVYVLVNLGSFPEVQDRAYNEIMDVF-GDSDRDLEKE 366
+D+EI + + A D +S + ++ L P+V + E + + GD D L +
Sbjct: 305 SDEEISLTFLSFLFASQDATSSAMTWLFQLLADHPDVLQKVREEQLRIRKGDIDVPLSLD 364
Query: 367 DLSKLVYTEAVLKETMRLYTMGPVSLRHIEEDVKL-KNFTLKAGTDCSISLFGINRHTVW 425
+ K+ YT AV+KE +RL + +++ + ++T+ +L+G +
Sbjct: 365 LMEKMTYTRAVVKECLRLRPPVLMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALHDSKV 424
Query: 426 GEDVNEFKPERWLD---PQKIPDNAFAAFSIGKRSCTGRAYAL 465
+ F P+RW ++ P N + F G C G+ YA+
Sbjct: 425 YPEPETFNPDRWAPNGLAEQSPKN-WMVFGNGPHVCLGQRYAV 466
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 46.4 bits (105), Expect = 9e-06
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 253 KREDELIRIVNEMSNKIIARKRSELASGVAAANETDNKYQGLLDLMLKLAKEDA--LTDQ 310
+R D +I+ + KII +RS T+N ++ ++ D L +
Sbjct: 227 RRRDRAHKIMQKTYLKIIKDRRSS----------TENPGTDMIWTLMSCKYRDGRPLKEH 276
Query: 311 EIREEVDTAIMAGFDTSSWILVYVLVNLGSFPEVQDRAYNEIMDVFGDSDRDLEKEDLSK 370
EI + +MAG TS+ +V+VL LGS PE+ + + E V G+ + +L+ +
Sbjct: 277 EIAGMMIALLMAGQHTSAATIVWVLALLGSKPEIIEMLWEEQKRVVGE-NLELKFDQYKD 335
Query: 371 LVYTEAVLKETMRLYTMGPVSLRHIEEDVKLKNFTLK-AGTDCSISLFGIN-RHTVWGED 428
+ V++ET+RL+ +R ++ D+ + + + ++ G+ +
Sbjct: 336 MPLLNYVIQETLRLHPPIHSHMRKVKRDLPVPGSKIVIPANNYLLAAPGLTATEEEYFTH 395
Query: 429 VNEFKPERWLDPQKIPDNA 447
+F P+RW D +NA
Sbjct: 396 ATDFDPKRWNDRVNEDENA 414
Score = 44.4 bits (100), Expect = 4e-05
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 52 EILEELNTAVFGGYDTTSCTLTYVLMNLGTYQDVQQKMYEEIKNVFGDSERDVESDDLSK 111
EI + + G T++ T+ +VL LG+ ++ + ++EE K V G++ +++ D
Sbjct: 277 EIAGMMIALLMAGQHTSAATIVWVLALLGSKPEIIEMLWEEQKRVVGEN-LELKFDQYKD 335
Query: 112 LVYTEAVIKESLRLYPIAPIIFRELDQDVKI-NNYTLKAGRGCAINVYGIN-RHAMWGDD 169
+ VI+E+LRL+P R++ +D+ + + + + G+ +
Sbjct: 336 MPLLNYVIQETLRLHPPIHSHMRKVKRDLPVPGSKIVIPANNYLLAAPGLTATEEEYFTH 395
Query: 170 ADKFRPERW----LEPDGVPSVYYAFA-----------TFGVGKRACIGTAF 206
A F P+RW E + + Y + FG G+ CIG F
Sbjct: 396 ATDFDPKRWNDRVNEDENAEQIDYGYGLVTKGAASPYLPFGAGRHRCIGEQF 447
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 27.9 bits (59), Expect = 3.5
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 242 IDFIYNLTSIKKREDELIRIVNEMSNKIIARKRSELASGVAAANETDNK--YQGLLDLML 299
+ ++YN T I E + +RI+ + S++ + + + L + ++T + + L
Sbjct: 301 VPYLYNHTPIVSTEVDGVRILTKDSSEFLRKVPAPLENIFHIGSKTPGAKLVEAFQKMKL 360
Query: 300 K-LAKEDALTD--QEIREEVDTAIMAGFDTSSWILVYVLVNLGSFPEVQDRAYN--EIMD 354
K + E L + E+ + VDT + A + S VL+ S + R YN E +D
Sbjct: 361 KSVFAEKMLLELKDELHDAVDTCVQASLNEFSIEWQKVLLEAASLGKNSLRMYNHQEYVD 420
Query: 355 V 355
V
Sbjct: 421 V 421
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 439 DPQKIPDNAFAAFSIGKRSCTGRAYALTLMKINLAH 474
D +++ DN ++S G SC + L + K+ AH
Sbjct: 20 DIEQLKDNVVVSYSTGSWSCFDKGTLLEIFKVPKAH 55
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 27.1 bits (57), Expect = 6.2
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 178 WLEPDGVPSVYYAFATFGVGKRACIGTAFGVYTNEDENFTKAYMSAVDEILTIITKRFTR 237
W D PS + + R+C Y +E+ K S +T + ++
Sbjct: 39 WFAHDETPSFKWVLNAYHERLRSCTSCIQAYYELRNESLAKGSYSFTGFSITDLQEK--- 95
Query: 238 VWLQIDFIYNLTSIKKREDELI 259
W + D I L K EDE I
Sbjct: 96 -WNKWDIIRVLEDFKALEDETI 116
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 395 IEEDVKLKNFTLKAGTDCSISLFGINRHT--VWGEDVN 430
I D+K N + C IS FGI++H+ V+ D N
Sbjct: 952 IHRDLKADNLLIDFDGVCKISDFGISKHSDNVYDNDAN 989
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 KNVFGDSERDVESDDLSKLVYTEAVIKESLRLYPIAPIIFRELDQDV 140
K+ GD D+E +SK+ Y +A+ ES+ L PI P +++ DV
Sbjct: 28 KDSNGDGFGDLEGI-ISKVDYLKALNVESIWLCPIYPSPLKDMGYDV 73
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 345 QDRAYNEIMDVFGDSDRDLEK--EDLSKLVYTEAVLKETMRLYTMGPVSLR 393
++ YNE+M+ F D DL + E ++KL E L + + SLR
Sbjct: 578 KEETYNEVMNAFQYKDNDLRRFHESINKLQDREKELTSNLEKKNLVISSLR 628
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 330 ILVYVLVNLGSFPEVQDRAYNEIMDVFGDSDRDLEKEDL 368
IL L NL FP ++ R +NE++D F + +EK+ L
Sbjct: 1291 ILRSQLTNL-LFPGLEPREFNEVLDYFIAAGAAIEKDGL 1328
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 243 DFIYNLTSIKKREDELIRIVNEMSNKIIARKRSELASGVAAAN 285
+F L+S+ E E+IR+V+ +SN ++ + + + + + N
Sbjct: 1205 EFSSLLSSLTNSEREVIRLVSNLSNHVLTNESARQLTKIRSKN 1247
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 26.6 bits (56), Expect = 8.2
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 348 AYNEIMDVFGDSDRDLEKEDLSKLVYTEAVLKETMRLYT---MGPVSLRH----IEEDVK 400
+Y E+ DV+ ++L + DL +++ ++ + + + +T + + H + D+K
Sbjct: 108 SYQELEDVY--IVQELMETDLYRVIRSQPLSDDHCQYFTYQILRALKAMHSAGVVHRDLK 165
Query: 401 LKNFTLKAGTDCSISLFGINRHT 423
N L A D ++ FG+ R T
Sbjct: 166 PSNLLLNANCDLKVADFGLARST 188
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,235,722
Number of Sequences: 5004
Number of extensions: 97086
Number of successful extensions: 275
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 18
length of query: 510
length of database: 2,362,478
effective HSP length: 76
effective length of query: 434
effective length of database: 1,982,174
effective search space: 860263516
effective search space used: 860263516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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