GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002272-TA|BGIBMGA002272-PA|IPR002401|E-class P450, group
I, IPR001128|Cytochrome P450, IPR002048|Calcium-binding EF-hand
         (510 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   140   2e-35
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    87   4e-19
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    83   7e-18
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   1.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   7.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  140 bits (340), Expect = 2e-35
 Identities = 80/231 (34%), Positives = 133/231 (57%), Gaps = 9/231 (3%)

Query: 288 DNKYQGLLDLMLKLAKEDAL-TDQEIREEVDTAIMAGFDTSSWILVYVLVNLGSFPEVQD 346
           + K Q  LDL+++  +   L TD+E++E+VDT +  G DT++    + L  +G  P++Q+
Sbjct: 313 EKKRQAFLDLLIEAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQE 372

Query: 347 RAYNEIMDVFGDSDRDLEKEDLSKLVYTEAVLKETMRLYTMGPVSLRHIEEDVKLK--NF 404
           +   E+ ++FGDSDR    +D  ++ Y E  L ET+R+Y   P+  R I+ D+KL   ++
Sbjct: 373 KVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDY 432

Query: 405 TLKAGTDCSISLFGINRHTVWGEDVNEFKPERWLDPQKIPDN---AFAAFSIGKRSCTGR 461
           T+ AG    I  F ++R      + + F P+ +L P+K  +    AF  FS G RSC GR
Sbjct: 433 TIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFL-PEKTANRHYYAFVPFSAGPRSCVGR 491

Query: 462 AYALTLMKINLAHLLRKYKISGDVSKLDFKF--NFIIKPISGSEIGLEYRK 510
            YA+  +KI L+ +LR +++  DV + +F+   + I+K   G +I LE RK
Sbjct: 492 KYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKIRLEPRK 542



 Score =  112 bits (270), Expect = 6e-27
 Identities = 53/162 (32%), Positives = 92/162 (56%), Gaps = 2/162 (1%)

Query: 49  TGPEILEELNTAVFGGYDTTSCTLTYVLMNLGTYQDVQQKMYEEIKNVFGDSERDVESDD 108
           T  E+ E+++T +F G+DTT+   ++ L  +G + D+Q+K+ +E+  +FGDS+R     D
Sbjct: 334 TDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDRPATFQD 393

Query: 109 LSKLVYTEAVIKESLRLYPIAPIIFRELDQDVKI--NNYTLKAGRGCAINVYGINRHAMW 166
             ++ Y E  + E+LR+YP  P+I RE+  D+K+   +YT+ AG    I  + ++R    
Sbjct: 394 TLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHI 453

Query: 167 GDDADKFRPERWLEPDGVPSVYYAFATFGVGKRACIGTAFGV 208
             + D F P+ +L        YYAF  F  G R+C+G  + +
Sbjct: 454 YPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAM 495



 Score = 52.8 bits (121), Expect = 6e-09
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 204 TAFGVYTNEDENFTKAYMSAVDEILTIITKRFTRVWLQIDFIYNLTSIKKREDELIRIVN 263
           TA GV     ++    Y  AV ++  I+  R T++WL+ D+++NLT   K + +L+ I++
Sbjct: 193 TAMGVSKPTRDHNAFEYAMAVMKMCDILHLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIH 252

Query: 264 EMSNKIIARKRSELASGVAAANETDNKYQ 292
            ++ K+I  K+ E  SG    N  DN  Q
Sbjct: 253 GLTKKVIQLKKEEYKSG--KRNIIDNSAQ 279


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 86.6 bits (205), Expect = 4e-19
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 4/149 (2%)

Query: 64  GYDTTSCTLTYVLMNLGTYQDVQQKMYEEIKNVFGDSERDVESDDLSKLVYTEAVIKESL 123
           G++T+S T++  L  L   QDVQ+K+ EEI      + ++++ DD+ ++ Y + V KE+L
Sbjct: 305 GFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKETL 364

Query: 124 RLYPIAPIIFRELDQDVKINN--YTLKAGRGCAINVYGINRHAMWGDDADKFRPERWLEP 181
           R+YP A I+ R+   D   N+   T+       I  + I+R +    + D F PER+ + 
Sbjct: 365 RMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIYPNPDSFDPERF-DQ 423

Query: 182 DGVPSVY-YAFATFGVGKRACIGTAFGVY 209
           D + S +   +  FG G R CIG  F VY
Sbjct: 424 DAMASRHPMHYLPFGDGPRNCIGARFAVY 452



 Score = 72.5 bits (170), Expect = 7e-15
 Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 10/204 (4%)

Query: 307 LTDQEIREEVDTAIMAGFDTSSWILVYVLVNLGSFPEVQDRAYNEIMDVFGDSDRDLEKE 366
           LTD  I  +     +AGF+TSS  +   L  L    +VQ +   EI      ++++L+ +
Sbjct: 289 LTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYD 348

Query: 367 DLSKLVYTEAVLKETMRLYTMGPVSLRHIEEDVKLKN--FTLKAGTDCSISLFGINRHTV 424
           D+ ++ Y + V KET+R+Y    + +R    D    +   T+       I  F I+R + 
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSA 408

Query: 425 WGEDVNEFKPERWLDPQKIPDN---AFAAFSIGKRSCTGRAYALTLMKINLAHLLRKYKI 481
              + + F PER+ D   +       +  F  G R+C G  +A+   K+ L  +LR +K+
Sbjct: 409 IYPNPDSFDPERF-DQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467

Query: 482 S-GDVSKLDFKFN---FIIKPISG 501
              + + + ++F+   F++ P  G
Sbjct: 468 EVCEKTIIPYEFDPGAFLLSPKDG 491


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 82.6 bits (195), Expect = 7e-18
 Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 9/239 (3%)

Query: 275 SELASGVAAANETDNKYQGLLDLMLKLAKEDALTDQEIREEVDTAIMAGFDTSSWILVYV 334
           SE+          D K + +  +   + ++  L  ++ +  +   I AG  T    LV++
Sbjct: 283 SEIIETTIQEKRDDAKDESVEAIFQSILRQKNLDIRDKKAAIVDFIAAGIHTLGNTLVFL 342

Query: 335 LVNLGSFPEVQDRAYNEIMDVFGDSDRDLEKEDLSKLVYTEAVLKETMRLYTMGPVSLRH 394
              +G  P VQ++ Y E       +  DL  ++L K  Y  A + E++RL        R 
Sbjct: 343 FDLIGRNPTVQNKLYEETY-ALAPAGCDLTIDNLRKAKYLRACITESLRLIPTTTCIARI 401

Query: 395 IEEDVKLKNFTLKAGTDCSIS--LFGINRHTVWGEDVNEFKPERWLDPQKIPDNAF--AA 450
           ++E ++L  + L AGT   +   + G+N      +D  ++ PERW  P   P +    A 
Sbjct: 402 LDEPIELSGYRLTAGTVVLLHTWIAGLNEENF--KDAKKYLPERWTTP-TTPHSPLLVAP 458

Query: 451 FSIGKRSCTGRAYALTLMKINLAHLLRKYKISGDVSKLDFKFNFIIKPISGSEIGLEYR 509
           F  G+R C G+ +    +++ LA ++R+++I  +  +LD +F FI+ P     +G   R
Sbjct: 459 FGAGRRICPGKRFVDLALQLILAKIIREFEIIVE-EELDLQFEFILAPKGPVSLGFRDR 516



 Score = 78.6 bits (185), Expect = 1e-16
 Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 61  VFGGYDTTSCTLTYVLMNLGTYQDVQQKMYEEIKNVFGDSERDVESDDLSKLVYTEAVIK 120
           +  G  T   TL ++   +G    VQ K+YEE       +  D+  D+L K  Y  A I 
Sbjct: 328 IAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETY-ALAPAGCDLTIDNLRKAKYLRACIT 386

Query: 121 ESLRLYPIAPIIFRELDQDVKINNYTLKAGRGCAINVY--GINRHAMWGDDADKFRPERW 178
           ESLRL P    I R LD+ ++++ Y L AG    ++ +  G+N       DA K+ PERW
Sbjct: 387 ESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWIAGLNEENF--KDAKKYLPERW 444

Query: 179 LEPDGVPSVYYAFATFGVGKRACIGTAF 206
             P   P      A FG G+R C G  F
Sbjct: 445 TTPT-TPHSPLLVAPFGAGRRICPGKRF 471


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 392 LRHIEEDVKLKNFTLKAGTDCSISLFGINRH----TVWGEDVNEFK-PERWLDPQKIPDN 446
           + ++  D+  +N  + A   C I+ FG++R     T         K P RW  P+ I   
Sbjct: 754 MNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFR 813

Query: 447 AFAAFS 452
            F + S
Sbjct: 814 KFTSAS 819


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 285 NETD-NKYQGLLDLMLKLAKEDALTDQEIREEVDTAIM 321
           N+ D  KY+G+     + +    L   EIRE +DT  +
Sbjct: 306 NDLDLEKYEGISSTPSQASSCSCLDCDEIRESLDTQFL 343


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,525
Number of Sequences: 429
Number of extensions: 5945
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 9
length of query: 510
length of database: 140,377
effective HSP length: 61
effective length of query: 449
effective length of database: 114,208
effective search space: 51279392
effective search space used: 51279392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)