GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002269-TA|BGIBMGA002269-PA|IPR002401|E-class P450, group
I, IPR001128|Cytochrome P450
         (377 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   107   1e-25
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    74   2e-15
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    74   2e-15
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   3.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   7.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   7.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   9.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  107 bits (258), Expect = 1e-25
 Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 2/156 (1%)

Query: 211 TDKEIRNEVDTFIAAGSHTSSQLMTVVVMVLGSYPEIQDKVYQEIKSVCGDSDADVDKLQ 270
           TDKE++ +VDT +  G  T++   +  + V+G +P+IQ+KV QE+  + GDSD       
Sbjct: 334 TDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDRPATFQD 393

Query: 271 HPRLVYTEAVLKETLRLYPIAPVVLRKTENEIKLK--NYTIPANSNCLLGIYGLNRHPVW 328
              + Y E  L ETLR+YP  P++ R+ + ++KL   +YTIPA    ++G + L+R P  
Sbjct: 394 TLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHI 453

Query: 329 GPDAHTFRPERWLEPGGVPDDPNAFAGFSVGKRNCI 364
            P+   F P+ +L          AF  FS G R+C+
Sbjct: 454 YPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCV 489



 Score = 87.4 bits (207), Expect = 2e-19
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query: 2   LITVITDPEDNLTV--ANGELQKHYFYQFTSNWVGDGLVTSAGETWKRHRKLLNPAFSQQ 59
           L+  + DP D   +  +N  + K   Y+F   W+GDGL+ S G+ W+ HRKL+ P F   
Sbjct: 89  LVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLN 148

Query: 60  MLNIYTAVFNRESRNLISAIEIQMKSGPVLITAAF-KEMALKTLLSTAFGIEEEECDFNQ 118
           +L  +  +FN  +R+++   +++ ++G       +  E+ +  LL TA G+ +   D N 
Sbjct: 149 VLKSFIDLFNANARSVVE--KMRKENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNA 206

Query: 119 -KYMHAVDELMAVLTRRLQNILLHNSFIYKLSALKKKEDELIETIMAMSNKAINSKRRAL 177
            +Y  AV ++  +L  R   I L   +++ L+   K + +L+E I  ++ K I  K+   
Sbjct: 207 FEYAMAVMKMCDILHLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQLKKEEY 266

Query: 178 KN-KQESHENGC-ASEKKT 194
           K+ K+   +N    +E KT
Sbjct: 267 KSGKRNIIDNSAQKTESKT 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 74.1 bits (174), Expect = 2e-15
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 2/156 (1%)

Query: 211 TDKEIRNEVDTFIAAGSHTSSQLMTVVVMVLGSYPEIQDKVYQEIKSVCGDSDADVDKLQ 270
           TD  I  +   F  AG  TSS  M+  +  L    ++Q K+ +EI + C  ++ ++    
Sbjct: 290 TDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDD 349

Query: 271 HPRLVYTEAVLKETLRLYPIAPVVLRKTENEIKLKN--YTIPANSNCLLGIYGLNRHPVW 328
              + Y + V KETLR+YP A +++RK  ++    +   TIP      +  + ++R    
Sbjct: 350 IKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAI 409

Query: 329 GPDAHTFRPERWLEPGGVPDDPNAFAGFSVGKRNCI 364
            P+  +F PER+ +       P  +  F  G RNCI
Sbjct: 410 YPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCI 445


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 73.7 bits (173), Expect = 2e-15
 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 222 FIAAGSHTSSQLMTVVVMVLGSYPEIQDKVYQEIKSVC-GDSDADVDKLQHPRLVYTEAV 280
           FIAAG HT    +  +  ++G  P +Q+K+Y+E  ++     D  +D L+  +  Y  A 
Sbjct: 327 FIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAK--YLRAC 384

Query: 281 LKETLRLYPIAPVVLRKTENEIKLKNYTIPANSNCLL--GIYGLNRHPVWGPDAHTFRPE 338
           + E+LRL P    + R  +  I+L  Y + A +  LL   I GLN       DA  + PE
Sbjct: 385 ITESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWIAGLNEENF--KDAKKYLPE 442

Query: 339 RWLEPGGVPDDPNAFAGFSVGKRNC 363
           RW  P   P  P   A F  G+R C
Sbjct: 443 RWTTP-TTPHSPLLVAPFGAGRRIC 466


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 152 KKKEDELIETIMAMSNKAINSKRRALKNKQESH 184
           +K  DE I T+ A+  K I +   A  +  E+H
Sbjct: 130 EKMSDEKISTLYALGAKIIRTPTEASWHSPEAH 162


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 238 VMVLGSYPEIQDKVYQEIKSVC 259
           ++ LGSY +  + VY++   VC
Sbjct: 298 LVALGSYNKFNNNVYKDALIVC 319


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 238 VMVLGSYPEIQDKVYQEIKSVC 259
           ++ LGSY +  + VY++   VC
Sbjct: 351 LVALGSYNKFNNNVYKDALIVC 372


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 344 GGVPDDPNAFAGFSVGKRNCIDCIDDVAVPGISL 377
           GGVP   N      V + + I+ I D + PG+ +
Sbjct: 108 GGVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGV 141


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,580
Number of Sequences: 429
Number of extensions: 4466
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 9
length of query: 377
length of database: 140,377
effective HSP length: 59
effective length of query: 318
effective length of database: 115,066
effective search space: 36590988
effective search space used: 36590988
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)