GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002268-TA|BGIBMGA002268-PA|IPR002401|E-class P450, group
I, IPR001128|Cytochrome P450
         (225 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    56   2e-10
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 71  EKKTHSMSDLLLK-GLDDEAFTDKEIRNEVDTLIFTGTDTSSQIMTVVVMLLGSYPEIQD 129
           EKK  +  DLL++ G +    TDKE++ +VDT++F G DT++   +  + ++G +P+IQ+
Sbjct: 313 EKKRQAFLDLLIEAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQE 372

Query: 130 KVYQE 134
           KV QE
Sbjct: 373 KVIQE 377



 Score = 35.9 bits (79), Expect = 3e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 173 VARKTYALISMKTTLVHLLRRYKVTADISKIEFKL--DALMVPSDNCYAKFESRK 225
           V RK YA++ +K  L  +LR ++V +D+ + EF+L  D ++  +D    + E RK
Sbjct: 489 VGRK-YAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKIRLEPRK 542


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 103 IFTGTDTSSQIMTVVVMLLGSYPEIQDKVYQE 134
           I  G  T    +  +  L+G  P +Q+K+Y+E
Sbjct: 328 IAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEE 359


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 85  LDDEAFTDKEIRNEVDTLIFTGTDTSSQIMTVVVMLLGSYPEIQDKVYQEDET 137
           L++   TD  I  +       G +TSS  M+  +  L    ++Q K+ +E  T
Sbjct: 284 LENIKLTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINT 336


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 32  KKKEDELIETITTMSNKVINSKRRALKNKQESH 64
           +K  DE I T+  +  K+I +   A  +  E+H
Sbjct: 130 EKMSDEKISTLYALGAKIIRTPTEASWHSPEAH 162


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 31  LKKKEDELIETITTMSNKVINSKRRALKNKQESHENGCASEKKTH 75
           LK+         TT   +  +S+      ++ES+EN     K+TH
Sbjct: 152 LKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHKETH 196


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.131    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,272
Number of Sequences: 429
Number of extensions: 2126
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 7
length of query: 225
length of database: 140,377
effective HSP length: 55
effective length of query: 170
effective length of database: 116,782
effective search space: 19852940
effective search space used: 19852940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)