GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002267-TA|BGIBMGA002267-PA|IPR001128|Cytochrome P450
         (415 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   212   4e-57
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    92   7e-21
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    79   9e-17
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   4.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  212 bits (518), Expect = 4e-57
 Identities = 140/456 (30%), Positives = 234/456 (51%), Gaps = 44/456 (9%)

Query: 2   LITVITDPEDNLTV--ANGALHKHFFYQFASNWLGDGLVTSSGETWKRHRKLLNPAFSQQ 59
           L+  + DP D   +  +N  + K   Y+F   WLGDGL+ S+G+ W+ HRKL+ P F   
Sbjct: 89  LVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLN 148

Query: 60  MLNIYTVVFNRESRNLISAIEIQMKSGPVLISAAF-KEMALKALLSTAFGIEVEECDFNQ 118
           +L  +  +FN  +R+++   +++ ++G       +  E+ +  LL TA G+     D N 
Sbjct: 149 VLKSFIDLFNANARSVVE--KMRKENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNA 206

Query: 119 -KYMHAVDEVMAVLTRRFQNILLHNSFVYKLSALKKKEDELIETITTMSNKVI------- 170
            +Y  AV ++  +L  R   I L   +++ L+   K + +L+E I  ++ KVI       
Sbjct: 207 FEYAMAVMKMCDILHLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQLKKEEY 266

Query: 171 -NSKRRALKN---KQESHENGCA----------------------SEKKTQSMSDLLLK- 203
            + KR  + N   K ES  N                          EKK Q+  DLL++ 
Sbjct: 267 KSGKRNIIDNSAQKTESKTNNIVVEGVSFGQSVGLKDDLDIDDDVGEKKRQAFLDLLIEA 326

Query: 204 GLDDEAFTDKEIRNEVDTLIFTGSDTSSQIMTVVVMLLGSYPEIQDKVYQEIKSVCGDSD 263
           G +    TDKE++ +VDT++F G DT++   +  + ++G +P+IQ+KV QE+  + GDSD
Sbjct: 327 GQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSD 386

Query: 264 ADVDKLQHPRLVYTEAVLKETLRLYPITPVVLRKTENEIKLKS--YTIPANSNCMLGIYG 321
                     + Y E  L ETLR+YP  P++ R+ + ++KL S  YTIPA    ++G + 
Sbjct: 387 RPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFK 446

Query: 322 LNRHPVWGPDAHTFRPERWLELGGVPDDPNAFAGFSVGKRNCIGKTYALISMKTTLVHLL 381
           L+R P   P+   F P+ +L          AF  FS G R+C+G+ YA++ +K  L  +L
Sbjct: 447 LHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTIL 506

Query: 382 RRYKVTADISKIEFKL--DALMVPSDNCYAKFESRK 415
           R ++V +D+ + EF+L  D ++  +D    + E RK
Sbjct: 507 RNFRVRSDVKESEFRLQADIILKRADGFKIRLEPRK 542


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 92.3 bits (219), Expect = 7e-21
 Identities = 89/388 (22%), Positives = 160/388 (41%), Gaps = 18/388 (4%)

Query: 33  LGDGLVTSSGETWKRHRKLLNPAFSQQMLNIYTVVFNRESRNLISAIE-IQMKSGPVLIS 91
           L   L+    E W+  R  L+P F+   L     +    S NL + ++ +  K+ P+   
Sbjct: 116 LSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECR 175

Query: 92  AAFKEMALKALLSTAFGIEVEEC-DFNQKYMHAVDEVMAVLTRRFQNILLHNSFVYKLSA 150
                     + S AFGI++    + N ++     EV AV    F N++       KL  
Sbjct: 176 ELTARFTTDVIGSCAFGIDMSSMTNENSEFRRMGREVFAV---NFMNVMR-----MKLKQ 227

Query: 151 LKKKEDELIETITTMSNKVINSKRRALKNKQESHENGCASEKKTQSMSDLLL--KGLDDE 208
              +  +L+  +           R      +  ++N          + +L    + L++ 
Sbjct: 228 FMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLENI 287

Query: 209 AFTDKEIRNEVDTLIFTGSDTSSQIMTVVVMLLGSYPEIQDKVYQEIKSVCGDSDADVDK 268
             TD  I  +       G +TSS  M+  +  L    ++Q K+ +EI + C  ++ ++  
Sbjct: 288 KLTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKY 347

Query: 269 LQHPRLVYTEAVLKETLRLYPITPVVLRKTENEIKLK--SYTIPANSNCMLGIYGLNRHP 326
                + Y + V KETLR+YP   +++RK  ++        TIP      +  + ++R  
Sbjct: 348 DDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDS 407

Query: 327 VWGPDAHTFRPERWLELGGVPDDPNAFAGFSVGKRNCIGKTYALISMKTTLVHLLRRYKV 386
              P+  +F PER+ +       P  +  F  G RNCIG  +A+   K  L+ +LR +KV
Sbjct: 408 AIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467

Query: 387 -TADISKIEFKLDA---LMVPSDNCYAK 410
              + + I ++ D    L+ P D  Y K
Sbjct: 468 EVCEKTIIPYEFDPGAFLLSPKDGIYLK 495


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 78.6 bits (185), Expect = 9e-17
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 9/227 (3%)

Query: 191 EKKTQSMSDLLLKGLDDEAFTDKEIRNEVDTLIFTGSDTSSQIMTVVVMLLGSYPEIQDK 250
           + K +S+  +    L  +    ++ +  +   I  G  T    +  +  L+G  P +Q+K
Sbjct: 296 DAKDESVEAIFQSILRQKNLDIRDKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNK 355

Query: 251 VYQEIKSVC-GDSDADVDKLQHPRLVYTEAVLKETLRLYPITPVVLRKTENEIKLKSYTI 309
           +Y+E  ++     D  +D L+  +  Y  A + E+LRL P T  + R  +  I+L  Y +
Sbjct: 356 LYEETYALAPAGCDLTIDNLRKAK--YLRACITESLRLIPTTTCIARILDEPIELSGYRL 413

Query: 310 PANSNCMLG--IYGLNRHPVWGPDAHTFRPERWLELGGVPDDPNAFAGFSVGKRNCIGKT 367
            A +  +L   I GLN       DA  + PERW      P  P   A F  G+R C GK 
Sbjct: 414 TAGTVVLLHTWIAGLNEENF--KDAKKYLPERWTT-PTTPHSPLLVAPFGAGRRICPGKR 470

Query: 368 YALISMKTTLVHLLRRYKVTADISKIEFKLDALMVPSDNCYAKFESR 414
           +  ++++  L  ++R +++  +  +++ + + ++ P       F  R
Sbjct: 471 FVDLALQLILAKIIREFEIIVE-EELDLQFEFILAPKGPVSLGFRDR 516


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 152 KKKEDELIETITTMSNKVINSKRRALKNKQESH 184
           +K  DE I T+  +  K+I +   A  +  E+H
Sbjct: 130 EKMSDEKISTLYALGAKIIRTPTEASWHSPEAH 162


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,490
Number of Sequences: 429
Number of extensions: 4847
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 415
length of database: 140,377
effective HSP length: 59
effective length of query: 356
effective length of database: 115,066
effective search space: 40963496
effective search space used: 40963496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)