GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002266-TA|BGIBMGA002266-PA|IPR001993|Mitochondrial
substrate carrier
         (198 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    36   6e-04
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    36   6e-04
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    36   6e-04

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 36.3 bits (80), Expect = 6e-04
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 2   LNSPYRGVWECARHVYRAEGLRAFYRSYGTQIAMNVPFQALHFVTYE-WCQSVLNPARKY 60
           ++  Y+G+ +C   + + +G+ AF+R     +    P QAL+F   + + Q  L    K 
Sbjct: 49  VDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKN 108

Query: 61  DPRXXXXXXXXXXXXXXXXTT-----PLDVCKTVLNTQESAARAD----GLLEAASQVMR 111
                              T+     PLD  +T L         +    GLL+   + ++
Sbjct: 109 TQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVK 168

Query: 112 ATGPLGFFKGVQARVLYQMPAAAICWLTYETFKHMLGNTK 151
           + G +G ++G    V   +   A  +  ++T K ML + K
Sbjct: 169 SDGIIGLYRGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPK 208


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 36.3 bits (80), Expect = 6e-04
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 2   LNSPYRGVWECARHVYRAEGLRAFYRSYGTQIAMNVPFQALHFVTYE-WCQSVLNPARKY 60
           ++  Y+G+ +C   + + +G+ AF+R     +    P QAL+F   + + Q  L    K 
Sbjct: 49  VDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKN 108

Query: 61  DPRXXXXXXXXXXXXXXXXTT-----PLDVCKTVLNTQESAARAD----GLLEAASQVMR 111
                              T+     PLD  +T L         +    GLL+   + ++
Sbjct: 109 TQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVK 168

Query: 112 ATGPLGFFKGVQARVLYQMPAAAICWLTYETFKHMLGNTK 151
           + G +G ++G    V   +   A  +  ++T K ML + K
Sbjct: 169 SDGIIGLYRGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPK 208


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 36.3 bits (80), Expect = 6e-04
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 2   LNSPYRGVWECARHVYRAEGLRAFYRSYGTQIAMNVPFQALHFVTYE-WCQSVLNPARKY 60
           ++  Y+G+ +C   + + +G+ AF+R     +    P QAL+F   + + Q  L    K 
Sbjct: 49  VDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKN 108

Query: 61  DPRXXXXXXXXXXXXXXXXTT-----PLDVCKTVLNTQESAARAD----GLLEAASQVMR 111
                              T+     PLD  +T L         +    GLL+   + ++
Sbjct: 109 TQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVK 168

Query: 112 ATGPLGFFKGVQARVLYQMPAAAICWLTYETFKHMLGNTK 151
           + G +G ++G    V   +   A  +  ++T K ML + K
Sbjct: 169 SDGIIGLYRGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPK 208


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.131    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,825
Number of Sequences: 2123
Number of extensions: 4117
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 6
length of query: 198
length of database: 516,269
effective HSP length: 61
effective length of query: 137
effective length of database: 386,766
effective search space: 52986942
effective search space used: 52986942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)