GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002265-TA|BGIBMGA002265-PA|IPR003128|Villin headpiece,
IPR007122|Gelsolin
         (172 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   5.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   5.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.5  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)

Query: 2  HAAPRPGYGLRSSTLPAGVGRHCN 25
          H    PG G R    P   G++C+
Sbjct: 43 HCVNLPGVGHRCQCQPGFTGKYCH 66


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
          protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
          protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
          protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 13 YAAPAPGHGLQ 23


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
          protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
          Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 2  HAAPRPGYGLR 12
          +AAP PG+GL+
Sbjct: 57 YAAPAPGHGLQ 67


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,690
Number of Sequences: 317
Number of extensions: 1241
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 172
length of database: 114,650
effective HSP length: 53
effective length of query: 119
effective length of database: 97,849
effective search space: 11644031
effective search space used: 11644031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)