GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002265-TA|BGIBMGA002265-PA|IPR003128|Villin headpiece,
IPR007122|Gelsolin
         (172 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   3.9  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    23   6.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   8.9  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    22   8.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   8.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 33  TFSGMGDKTHSTDFSSGKSDISAGSITDVDRS 64
           T       +HST  ++G+SD S   I D  RS
Sbjct: 483 TTKSASTSSHSTTGTNGRSDSSESDIDDDCRS 514


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 126 PPDVDRLNLERHLSD 140
           PP+ DR  LER +SD
Sbjct: 448 PPETDRAELERIVSD 462


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 156 RLPQWRRNELKRRARL 171
           +LP W R E+K  ++L
Sbjct: 309 KLPDWERAEMKHESKL 324


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 36   GMGDKTHSTDFSSGKSDISAGSITDVDRSAVTT 68
            G     HS D S        G+IT +  +A TT
Sbjct: 1481 GTRSSNHSIDNSQRAGSDCMGTITSISTTATTT 1513


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 36   GMGDKTHSTDFSSGKSDISAGSITDVDRSAVTT 68
            G     HS D S        G+IT +  +A TT
Sbjct: 1478 GTRSSNHSIDNSQRAGSDCMGTITSISTTATTT 1510


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 9   YGLRS-STLPAGVGRHCNVRAEGDFTFS 35
           YG  S ST  +  G  C V AEGD + S
Sbjct: 635 YGKGSTSTTTSSAGTICTVLAEGDKSVS 662


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 9   YGLRS-STLPAGVGRHCNVRAEGDFTFS 35
           YG  S ST  +  G  C V AEGD + S
Sbjct: 636 YGKGSTSTTTSSAGTICTVLAEGDKSVS 663


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 124 RLPPDVDRLNLERHLSD 140
           R PP++DR  LER ++D
Sbjct: 391 RTPPELDREVLERIVTD 407


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,391
Number of Sequences: 2123
Number of extensions: 5959
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 11
length of query: 172
length of database: 516,269
effective HSP length: 60
effective length of query: 112
effective length of database: 388,889
effective search space: 43555568
effective search space used: 43555568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)