GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002264-TA|BGIBMGA002264-PA|undefined
         (217 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       26   0.20 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   1.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.3  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   3.3  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 56  PYTDPERRRRWSDTYKGVPDSDEEVDGKVNGAVNGRA-GVDPK--LRKEEEELSKIE 109
           PYT P        T  G P+ + EVD   +   NGR  G+ P   L  +EE   KI+
Sbjct: 137 PYTPPRL-----PTVYGKPEQNYEVDESASVMTNGRIHGIQPSPTLPSKEEVSKKID 188


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
          protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
          protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
          protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
          Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAP 53
          SP  +   P   S YP A   PP   P+  +  + AP
Sbjct: 24 SPGTDYYNPNANSTYPPACYSPPQVAPQYPQHPYAAP 60


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/45 (22%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 59  DPERRRRWSDTYKGVPDSDEEVDG-KVNGAVNGRAGVDPKLRKEE 102
           D  +R +W    +G P+  ++++G +  G++   +   P   +EE
Sbjct: 7   DCPKRMKWEGGEEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEE 51



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 11 ETPRPKSPHMNNEEPIELSHYP 32
          + P P SP   +E+P+     P
Sbjct: 59 DVPTPSSPRSISEDPLNCRDLP 80


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 194 GQRPDIVPPPTPPHC 208
           G R  + PP + PHC
Sbjct: 81  GDRTQLEPPISSPHC 95


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 194 GQRPDIVPPPTPPHC 208
           G R  + PP + PHC
Sbjct: 81  GDRTQLEPPISSPHC 95


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 59  DPERRRRWSDTYKGVP 74
           +PER + W+D Y   P
Sbjct: 496 EPERMKFWADIYNSNP 511


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 59  DPERRRRWSDTYKGVP 74
           +PER + W+D Y   P
Sbjct: 498 EPERMKFWADIYNSNP 513


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 59  DPERRRRWSDTYKGVP 74
           +PER + W+D Y   P
Sbjct: 496 EPERMKFWTDIYNSNP 511


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 59  DPERRRRWSDTYKGVP 74
           +PER + W+D Y   P
Sbjct: 498 EPERMKFWTDIYNSNP 513


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
          protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 23 EEPIELSHYPAAYKPPPGTKPKIERDDFPAPP 54
          E P +  HY AA + P G + +  R      P
Sbjct: 22 EHPHQHQHYGAAVQVPQGGRRRAARPGVVTTP 53


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 120 VKEREKLQQWKKQNLDPRNASRTPSASR 147
           V++   L  W K +LD     + P + R
Sbjct: 20  VQDHRNLLDWSKTSLDNATEHKLPISMR 47


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 120 VKEREKLQQWKKQNLDPRNASRTPSASR 147
           V++   L  W K +LD     + P + R
Sbjct: 20  VQDHRNLLDWSKTSLDNATEHKLPISMR 47


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.132    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,465
Number of Sequences: 317
Number of extensions: 2988
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of query: 217
length of database: 114,650
effective HSP length: 54
effective length of query: 163
effective length of database: 97,532
effective search space: 15897716
effective search space used: 15897716
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)
S2: 41 (20.6 bits)