Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002264-TA|BGIBMGA002264-PA|undefined
(217 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 30 0.30
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 29 0.53
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.2
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 2.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 2.8
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 27 2.8
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 2.8
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 3.7
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 3.7
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 26 3.7
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 26 3.7
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.7
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 26 4.9
SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit Snu23|... 26 4.9
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 4.9
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 6.5
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 6.5
SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces pombe... 25 8.6
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 25 8.6
SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein... 25 8.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 25 8.6
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 29.9 bits (64), Expect = 0.30
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 6 DSIRSETPRPKSPHMNNEEPIELSHYPAAYKPP--PGTKPKIERDDFPAPPYPYTDPERR 63
+S+R E+PR H N +P EL H ++ G + + ER D +P P + R
Sbjct: 71 ESVREESPRRPVEHERNWQP-ELKHGRERFRERDYEGRRDRKERRDGVSPFSPEGEGLER 129
Query: 64 RRWSDTYKGVPDSDEE 79
+R + + +EE
Sbjct: 130 KREHEKLQAPSPKEEE 145
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 29.1 bits (62), Expect = 0.53
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 56 PYTDPERRRRWSDTYKGVPDSDEEVDGKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQV 115
P +D RR S+ +P+ D+EVDG V GR D +E K + AQ
Sbjct: 36 PVSDRSSRRTSSEEVDLMPNVDDEVDGDVKPKKIGRKNSD----QEPSSKRKAQNRAAQR 91
Query: 116 FLKEVKE 122
++ KE
Sbjct: 92 AFRKRKE 98
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 12 TPRPKSPHMNNEEPIELSHYPA----AYKPPPGTKPKIERDDFPAPP 54
+P P S + + P + S + A +Y PPP +P+I +P PP
Sbjct: 96 SPPPSSNYNTAKPPYQTSQFYARPQSSYAPPPSGRPRI---SYPYPP 139
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 81 DGKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKEREKLQQWKKQNLDPRN 138
D V VN A ++ + EE+L K+E + +F ++V+E+E + + L R+
Sbjct: 373 DHSVFREVNPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENELRTRH 430
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 142 TPSASREPTYRLRYSSPVGAS---PSRSLDHP 170
TP ++R+PT R +SPV S PS SL +P
Sbjct: 115 TPQSNRKPTEAYRRNSPVKKSFSRPSHSLLYP 146
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 53 PPYPYTDPERRRRWSDTYKGVPDSDEEVDGKVNGAVNGRAGVDPKLRKEEE 103
PP P P W D+ + P ++ G V +N G+ LRK ++
Sbjct: 306 PPPPPPPPPSNDFWKDSNEPAPADNKGDMGAVFAEINKGEGITSGLRKVDK 356
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 6 DSIRSETPRPKSPHMNNEE-PIELSHYPAAYKPPPGTKPKIERDDFPAPP 54
DS+ + RPK ++E+ H P + PPP K + P PP
Sbjct: 176 DSVFFDDERPKHHEFDDEDREFPAHHEPGEHMPPPPMHHK-PGEHMPPPP 224
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 67 SDTYKGVPDSDEEVDGKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKEREKL 126
SD Y V D++ ++ + N ++ + K+ +EEE I+ +++F+ ++ E E++
Sbjct: 400 SDQYSDVEDTEVIIEDQDNQEISNHV-AEEKIDSDEEE--TIDDAKSEMFV-DLSEEEEV 455
Query: 127 QQWKK 131
+Q+++
Sbjct: 456 RQYEE 460
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 94 VDPKLRKEEEEL-SKIETGIAQVFLKEVKEREKLQQWKKQNLDPRNA 139
++ KL+ EE+++ SK E IA L+ ++ERE ++ + N++ NA
Sbjct: 75 MEKKLKIEEKKIKSKQEKEIAHA-LQSIQERELRERQQMSNVEASNA 120
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 82 GKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKEREKLQQWKK 131
G V A A + + K E+LS + IA + + K RE L+ W++
Sbjct: 529 GNVMPAREAVARITKLVAKPHEQLSGVFNQIANLLENKEKSRELLEAWQE 578
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 26.2 bits (55), Expect = 3.7
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 35 YKPPPGTK----PKIERDDFPAPPYPYTDPERRRRWSDTYKGVPDSDEEVDGKVNGAVNG 90
YKP G K K+E DD P P+ ++ D+E D K G
Sbjct: 102 YKPKKGKKGKKSKKVEEDDEPQEIESPQGPKELTAVTEL------DDDEFDYKPK---KG 152
Query: 91 RAGVDPKLRKEEE-----ELSKIETGIAQVFLKEVKEREKLQQWKKQNLDPRNASRTPSA 145
+ G + E E E+ ++ + +E KEREKL++ ++Q + A
Sbjct: 153 KKGKKAQNNNESEAAAPPEIPEVRVKTKKEKEREKKEREKLRKKQQQAKKKGSTGEDTLA 212
Query: 146 SREPTYRLRYSSP 158
S E + + S+P
Sbjct: 213 SSEVSSEVDISTP 225
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 14 RPKSPHMNNEEPIELSHYPAAYKPPP 39
+P +P P++ S +PA+Y+P P
Sbjct: 324 KPAAPVPTPAPPVKTSPHPASYRPQP 349
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 17 SPHMNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAPPYPYTDPERRR 64
S N+EE H + T P + + FPA Y D E+++
Sbjct: 10 SDSSNSEEKANAQHASSTDSTSEHTDPAVADEGFPAEQYQSADLEKQQ 57
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 136 PRNASRTPSASREPTYRLRYSSPVGASPSRSLD 168
P N R+ S P YR R SP G S S D
Sbjct: 128 PYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYD 160
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 15 PKSPHM--NNEEPIELSHYPAAYKP-PPGTKPKIERDDFPAPP---YPYTDP 60
P S H NN+ P SH+P + P P +P + P P YP + P
Sbjct: 120 PTSYHACSNNQSPFPHSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLP 171
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 101 EEEELSKIETGIAQVFLKEVKEREKLQQWKKQNLDPRNASR 141
EE+++ + A+ L+E +ER+K + NLDP A +
Sbjct: 75 EEKKVEDLREKPAERELREQEERQKKLRLAPLNLDPETAPK 115
Score = 25.4 bits (53), Expect = 6.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 83 KVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKERE------KLQQWKKQNLDP 136
K N G + + LR + EE +K + G + E + RE K ++++KQ L+
Sbjct: 178 KANPHQQGWSNMMLYLRYQVEEFAKKKWGSMEALDAEFERREVQKKEMKEKKFEKQLLEL 237
Query: 137 RNASRTPSASR 147
R +RT + SR
Sbjct: 238 RKRTRTSNYSR 248
>SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit
Snu23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 103 EELSKIETGIAQ--VFLKEVKEREKLQQWKKQNLDPRNAS 140
+ L K T I + L+EVKER ++ W++Q L+P S
Sbjct: 56 QHLRKTRTVIIEKRATLEEVKER--MEYWRRQLLEPEKGS 93
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 138 NASRTPSASREPTYRLRYSSPVGASPSRS 166
+ SR S SR P+YR R S S SRS
Sbjct: 751 STSRGRSFSRSPSYRRRLSMSCSVSYSRS 779
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 92 AGVDPKLRKEEEELSKIETGIAQVFLKEVKEREKLQQWK--KQNLDPRNASR 141
A VDPK + + ++ A F KE +E+E ++ + K++++P S+
Sbjct: 232 ASVDPKSAASKVQDAEFSIQTAPSFPKEKEEKENTEETEESKKSINPTGTSK 283
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 77 DEEVDGKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKEREK 125
D+ +DG V + RA + + EEL + ++QV + VK+ EK
Sbjct: 245 DKSIDGSVADLIQARASIAQRSEFLNEELEQ----LSQVLNQAVKKGEK 289
>SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 99 RKEEEELSKIETGIAQVFLKEVKEREKLQQWKKQNLDP-RNASRTPSASRE 148
++E+++ +K + A+ KE +ER K + KK + P RN S T + ++
Sbjct: 308 KEEKKKRAKDDEQYAKRLAKEEEERGKKETPKKASNTPRRNKSNTQKSRKQ 358
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 139 ASRTPSAS-REPTYRLRYSSPVGASPSRSLD 168
+S PS RE Y L SSP+ SP + LD
Sbjct: 14 SSSPPSTPIREENYYLLTSSPIECSPIQQLD 44
>SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein
Mad3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 131 KQNLDPRNASRTPSASREPTYRLRYSSPVGASPSRSLDHPRALD 174
K+N++PR A + SA + + R V + H R ++
Sbjct: 20 KENIEPRKAGHSASALAKSSSRNHTEKEVAGLQKERMGHERKIE 63
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 97 KLRKEEEELSKIETGIAQVFLKE 119
+L E++ELSK+E G+ V L E
Sbjct: 686 QLEAEKQELSKLEDGLKSVNLTE 708
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.132 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,175,878
Number of Sequences: 5004
Number of extensions: 54056
Number of successful extensions: 170
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 156
Number of HSP's gapped (non-prelim): 26
length of query: 217
length of database: 2,362,478
effective HSP length: 70
effective length of query: 147
effective length of database: 2,012,198
effective search space: 295793106
effective search space used: 295793106
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
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