Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002262-TA|BGIBMGA002262-PA|IPR003323|Ovarian tumour,
otubain
(429 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058438-1|AAL13667.1| 778|Drosophila melanogaster GH21672p pro... 473 e-133
AE014297-1010|AAF54429.1| 778|Drosophila melanogaster CG9448-PA... 473 e-133
AY069258-1|AAL39403.1| 272|Drosophila melanogaster GM04114p pro... 323 2e-88
AJ224676-1|CAA12058.1| 687|Drosophila melanogaster rho type GEF... 31 3.1
AE014134-3232|AAF53887.2| 687|Drosophila melanogaster CG10043-P... 31 3.1
AE014134-3231|AAF53886.1| 687|Drosophila melanogaster CG10043-P... 31 3.1
>AY058438-1|AAL13667.1| 778|Drosophila melanogaster GH21672p
protein.
Length = 778
Score = 473 bits (1166), Expect = e-133
Identities = 222/392 (56%), Positives = 277/392 (70%), Gaps = 7/392 (1%)
Query: 38 RFQRQEILSTLLSRISGGGPGLKRSPSYIAPDLASAIRRHIAGCLRQKKGNFPCRYINEF 97
RF R+E+L LL +ISG GPG+KR PSY+APDLA+ IRRH A LR +K PC Y+ +
Sbjct: 394 RFHREEMLPMLLDQISGSGPGIKRVPSYVAPDLAADIRRHFANTLRLRKSGLPCHYVQKH 453
Query: 98 CTFSLPADIEELPAAIQEQLFSELLDREAQQTLEADPPLINWSLEFTVNLGSRLYALWNR 157
TF+LPA+IEELP IQEQL+ ELLDR+AQ+ LE PP +NWSLE T L SR++ LWNR
Sbjct: 454 ATFALPAEIEELPIPIQEQLYDELLDRDAQKQLETPPPALNWSLEITARLSSRMFVLWNR 513
Query: 158 SAGDCLPDAVCQAAYGVFDRNNALRTALADSLHQAHRSFYERWQAWERMQASLLHYAPEE 217
SAGDCL D+ QA +GVFDR+N LR ALAD+LHQ F+ RW+ +E +QAS+LH+ E+
Sbjct: 514 SAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTRWKEYEMLQASMLHFTLED 573
Query: 218 GQLRAEWSRILASAARPGTPLHQIHVFVLAHVMRRPIIVYGVNVVNSFRGEALGFARFQG 277
Q +WS +L+ A +PG+ L Q+H+F LAH++RRPIIVYGV V SFRGE +G+ARF+G
Sbjct: 574 SQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGVKYVKSFRGEDIGYARFEG 633
Query: 278 IYLPLLWDPQFCSKSPLCLGYTRGHFSALVPIEPYSHRHTYICREQQDDNEDMIYLPLTD 337
+YLPL WD FC+KSP+ LGYTRGHFSALVP+EP++ ++DD ED+ YLPL D
Sbjct: 634 VYLPLFWDQNFCTKSPIALGYTRGHFSALVPMEPFTR-----IDGRRDDVEDVTYLPLMD 688
Query: 338 SEGKLLPVHFLTCDEMSEAESXXXXXXXXXETSGGLAAARRPSLAPSLLQAQMLEEWLNH 397
E KLLP+HFLT E+ ES T GGL A++ LL AQMLEEWLNH
Sbjct: 689 CELKLLPIHFLTQSEVGNEESMMRQWLDVCVTDGGLLVAQQKLSKRPLLVAQMLEEWLNH 748
Query: 398 YRRLAQQTRGPFPPRLQAAAAEYSSDPDTDEE 429
YRR+AQ PF R Q YSSD D+DEE
Sbjct: 749 YRRIAQVITAPFIRRPQ--ITHYSSDGDSDEE 778
>AE014297-1010|AAF54429.1| 778|Drosophila melanogaster CG9448-PA
protein.
Length = 778
Score = 473 bits (1166), Expect = e-133
Identities = 222/392 (56%), Positives = 277/392 (70%), Gaps = 7/392 (1%)
Query: 38 RFQRQEILSTLLSRISGGGPGLKRSPSYIAPDLASAIRRHIAGCLRQKKGNFPCRYINEF 97
RF R+E+L LL +ISG GPG+KR PSY+APDLA+ IRRH A LR +K PC Y+ +
Sbjct: 394 RFHREEMLPMLLDQISGSGPGIKRVPSYVAPDLAADIRRHFANTLRLRKSGLPCHYVQKH 453
Query: 98 CTFSLPADIEELPAAIQEQLFSELLDREAQQTLEADPPLINWSLEFTVNLGSRLYALWNR 157
TF+LPA+IEELP IQEQL+ ELLDR+AQ+ LE PP +NWSLE T L SR++ LWNR
Sbjct: 454 ATFALPAEIEELPIPIQEQLYDELLDRDAQKQLETPPPALNWSLEITARLSSRMFVLWNR 513
Query: 158 SAGDCLPDAVCQAAYGVFDRNNALRTALADSLHQAHRSFYERWQAWERMQASLLHYAPEE 217
SAGDCL D+ QA +GVFDR+N LR ALAD+LHQ F+ RW+ +E +QAS+LH+ E+
Sbjct: 514 SAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTRWKEYEMLQASMLHFTLED 573
Query: 218 GQLRAEWSRILASAARPGTPLHQIHVFVLAHVMRRPIIVYGVNVVNSFRGEALGFARFQG 277
Q +WS +L+ A +PG+ L Q+H+F LAH++RRPIIVYGV V SFRGE +G+ARF+G
Sbjct: 574 SQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGVKYVKSFRGEDIGYARFEG 633
Query: 278 IYLPLLWDPQFCSKSPLCLGYTRGHFSALVPIEPYSHRHTYICREQQDDNEDMIYLPLTD 337
+YLPL WD FC+KSP+ LGYTRGHFSALVP+EP++ ++DD ED+ YLPL D
Sbjct: 634 VYLPLFWDQNFCTKSPIALGYTRGHFSALVPMEPFTR-----IDGRRDDVEDVTYLPLMD 688
Query: 338 SEGKLLPVHFLTCDEMSEAESXXXXXXXXXETSGGLAAARRPSLAPSLLQAQMLEEWLNH 397
E KLLP+HFLT E+ ES T GGL A++ LL AQMLEEWLNH
Sbjct: 689 CELKLLPIHFLTQSEVGNEESMMRQWLDVCVTDGGLLVAQQKLSKRPLLVAQMLEEWLNH 748
Query: 398 YRRLAQQTRGPFPPRLQAAAAEYSSDPDTDEE 429
YRR+AQ PF R Q YSSD D+DEE
Sbjct: 749 YRRIAQVITAPFIRRPQ--ITHYSSDGDSDEE 778
>AY069258-1|AAL39403.1| 272|Drosophila melanogaster GM04114p
protein.
Length = 272
Score = 323 bits (794), Expect = 2e-88
Identities = 153/279 (54%), Positives = 193/279 (69%), Gaps = 7/279 (2%)
Query: 151 LYALWNRSAGDCLPDAVCQAAYGVFDRNNALRTALADSLHQAHRSFYERWQAWERMQASL 210
++ LWNRSAGDCL D+ QA +GVFDR+N LR ALAD+LHQ F+ RW+ +E +QAS+
Sbjct: 1 MFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTRWKEYEMLQASM 60
Query: 211 LHYAPEEGQLRAEWSRILASAARPGTPLHQIHVFVLAHVMRRPIIVYGVNVVNSFRGEAL 270
LH+ E+ Q +WS +L+ A +PG+ L Q+H+F LAH++RRPIIVYGV V SFRGE +
Sbjct: 61 LHFTLEDSQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGVKYVKSFRGEDI 120
Query: 271 GFARFQGIYLPLLWDPQFCSKSPLCLGYTRGHFSALVPIEPYSHRHTYICREQQDDNEDM 330
G+ARF+G+YLPL WD FC+KSP+ LGYTRGHFSALVP+EP++ ++DD ED+
Sbjct: 121 GYARFEGVYLPLFWDQNFCTKSPIALGYTRGHFSALVPMEPFTR-----IDGRRDDVEDV 175
Query: 331 IYLPLTDSEGKLLPVHFLTCDEMSEAESXXXXXXXXXETSGGLAAARRPSLAPSLLQAQM 390
YLPL D E KLLP+HFLT E+ ES T GGL A++ LL AQM
Sbjct: 176 TYLPLMDCELKLLPIHFLTQSEVGNEESMMRQWLDVCVTDGGLLVAQQKLSKRPLLVAQM 235
Query: 391 LEEWLNHYRRLAQQTRGPFPPRLQAAAAEYSSDPDTDEE 429
LEEWLNHYRR+AQ PF R Q YSSD D+DEE
Sbjct: 236 LEEWLNHYRRIAQVITAPFIRRPQ--ITHYSSDGDSDEE 272
>AJ224676-1|CAA12058.1| 687|Drosophila melanogaster rho type GEF
protein.
Length = 687
Score = 31.1 bits (67), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 80 GCLRQKKGNFPCRYINEFCTFSLP-ADIEELPAAIQEQ---LFSELLDREAQQTLEADPP 135
G L K G FP Y+NE C LP + P IQE + +LLD E E
Sbjct: 42 GTLNDKTGWFPSNYVNE-CKVQLPLTETIRPPEEIQEYRSVVLKDLLDSERAHVAELQGL 100
Query: 136 LINW 139
L N+
Sbjct: 101 LENF 104
>AE014134-3232|AAF53887.2| 687|Drosophila melanogaster CG10043-PB,
isoform B protein.
Length = 687
Score = 31.1 bits (67), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 80 GCLRQKKGNFPCRYINEFCTFSLP-ADIEELPAAIQEQ---LFSELLDREAQQTLEADPP 135
G L K G FP Y+NE C LP + P IQE + +LLD E E
Sbjct: 42 GTLNDKTGWFPSNYVNE-CKVQLPLTETIRPPEEIQEYRSVVLKDLLDSERAHVAELQGL 100
Query: 136 LINW 139
L N+
Sbjct: 101 LENF 104
>AE014134-3231|AAF53886.1| 687|Drosophila melanogaster CG10043-PA,
isoform A protein.
Length = 687
Score = 31.1 bits (67), Expect = 3.1
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 80 GCLRQKKGNFPCRYINEFCTFSLP-ADIEELPAAIQEQ---LFSELLDREAQQTLEADPP 135
G L K G FP Y+NE C LP + P IQE + +LLD E E
Sbjct: 42 GTLNDKTGWFPSNYVNE-CKVQLPLTETIRPPEEIQEYRSVVLKDLLDSERAHVAELQGL 100
Query: 136 LINW 139
L N+
Sbjct: 101 LENF 104
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.322 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,666,718
Number of Sequences: 52641
Number of extensions: 984925
Number of successful extensions: 2296
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2287
Number of HSP's gapped (non-prelim): 6
length of query: 429
length of database: 24,830,863
effective HSP length: 87
effective length of query: 342
effective length of database: 20,251,096
effective search space: 6925874832
effective search space used: 6925874832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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