Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002261-TA|BGIBMGA002261-PA|IPR006578|MADF,
IPR009057|Homeodomain-like, IPR001005|Myb, DNA-binding
(507 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.27
AC006795-1|AAF59492.2| 435|Caenorhabditis elegans Hypothetical ... 33 0.63
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 32 0.83
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 32 1.1
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 31 1.5
AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical ... 31 1.5
AF000196-10|AAC24250.1| 172|Caenorhabditis elegans Hypothetical... 31 1.5
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 31 2.5
AL032631-6|CAA21574.1| 234|Caenorhabditis elegans Hypothetical ... 31 2.5
Z68343-2|CAA92779.1| 213|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z68343-1|CAD89741.1| 231|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z29095-6|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 30 3.3
U80029-13|AAB37592.2| 429|Caenorhabditis elegans Hypothetical p... 30 3.3
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 29 5.9
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 29 5.9
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 29 7.7
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 29 7.7
>Z81042-7|CAE46660.1| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 291 KKELWKEISETVGEN--PPDCEKKFRNLKQTYIRIRSKVESGLAVTKW-RYYKDFEEIYG 347
K E+WK IS +G + P + E+K+++++ Y+R+R + + + K ++Y + ++
Sbjct: 46 KHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSF 105
Query: 348 HQTYCTTNNVKLVYKPNRDDYVRQLLLFYIENVDKFRDPLIKKRTLWKKLSPQILLSPDE 407
Y N K + DY+ ++++ F D L K + L P+ LL+ ++
Sbjct: 106 LDPYVEHRNRK-----RQKDYLNSNTPDFLDDDTAFLDGLSVK----EMLKPESLLTSND 156
Score = 34.3 bits (75), Expect = 0.21
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 361 YKPNRDDYVRQLLLFYIENVDKFR--DPLIK----KRTLWKKLSPQILLS--PDECDRKF 412
+ P DD+ L+ N + DPL K K +WK +S +I P E +RK+
Sbjct: 11 HDPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKW 70
Query: 413 RNLKQTYIRLIERKRETG---KNTKWPYFSYFEKI 444
++++ Y+RL ++ ++ K KW ++Y+ K+
Sbjct: 71 KHMRDKYVRLRKQDKQKAPIKKTNKW--YNYYHKM 103
>Z73976-9|CAA98280.2| 371|Caenorhabditis elegans Hypothetical
protein T07C12.11 protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 291 KKELWKEISETVGEN--PPDCEKKFRNLKQTYIRIRSKVESGLAVTKW-RYYKDFEEIYG 347
K E+WK IS +G + P + E+K+++++ Y+R+R + + + K ++Y + ++
Sbjct: 46 KHEIWKLISIEIGYDGQPVELERKWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSF 105
Query: 348 HQTYCTTNNVKLVYKPNRDDYVRQLLLFYIENVDKFRDPLIKKRTLWKKLSPQILLSPDE 407
Y N K + DY+ ++++ F D L K + L P+ LL+ ++
Sbjct: 106 LDPYVEHRNRK-----RQKDYLNSNTPDFLDDDTAFLDGLSVK----EMLKPESLLTSND 156
Score = 34.3 bits (75), Expect = 0.21
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 361 YKPNRDDYVRQLLLFYIENVDKFR--DPLIK----KRTLWKKLSPQILLS--PDECDRKF 412
+ P DD+ L+ N + DPL K K +WK +S +I P E +RK+
Sbjct: 11 HDPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYDGQPVELERKW 70
Query: 413 RNLKQTYIRLIERKRETG---KNTKWPYFSYFEKI 444
++++ Y+RL ++ ++ K KW ++Y+ K+
Sbjct: 71 KHMRDKYVRLRKQDKQKAPIKKTNKW--YNYYHKM 103
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 33.9 bits (74), Expect = 0.27
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 387 LIKKRTLWKKLSPQILLSPDECDRKFRNLKQTYIRLIERKRETGKNTKWPYFSYFEKIFD 446
+I+ R+ L ++ + D + +++ + Y+R I + ET + + S E+I D
Sbjct: 672 VIELRSSIDSLQAEVRVQSDSAADQ-KHILEDYLRKIRQAEETNEKLRSDLASSEEQILD 730
Query: 447 VPNQNARSVDNL--TIHEIKRVVQEMQDVRDTSKFD--KLVQSMEESNMIQRERNKILLA 502
+ NQ +D+L +H + QE+Q + K + Q + ES +++ + L
Sbjct: 731 LKNQQESLIDDLKEKLHSAESTNQELQVSLEMLKIEVSNARQKVMESEVLKESFEALQLE 790
Query: 503 L 503
L
Sbjct: 791 L 791
>AC006795-1|AAF59492.2| 435|Caenorhabditis elegans Hypothetical
protein Y50D4B.7 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.63
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 18 DQSNVILSTNNFVNQNPQIPLQETRYVVETGENRQFIHIN-EPPIIVQEHDSQPQEKVCS 76
D + +I + +N P+IP+ ++ + + ++ FIHIN + I V + D + KV S
Sbjct: 163 DGNGIIKACPYLLNICPKIPINQSLTIEKPTSDKLFIHINLDKDIKVFKADLKNGNKVES 222
Query: 77 TTKDVFW 83
+ +V+W
Sbjct: 223 FSIEVYW 229
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 32.3 bits (70), Expect = 0.83
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 97 EDRFKNINKQKTLWHDIASHVGTTADECCKKYRNLRRTYIRLLKKNRLGKEI-KWV 151
++ + ++ + + W++IA ++ TT++ +++ LR Y + KK R+ K+ WV
Sbjct: 68 DEGYNLLSWRNSAWNEIAENLETTSEHVKTRWKTLRDRYKKEEKKERVSKKASSWV 123
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 283 KFRNPRYLKKELWKEISETVG--ENPPDCEKKFRNLKQTYIRIRSKVESGLAVTKWRYYK 340
++RN Y K +W+ + +G +P +++ L+ Y + + K + G + W+Y+K
Sbjct: 27 QYRNTEY-KNRVWQRLVTVLGFDGDPRMLSARWKQLRDKYGKEKRKQKYGNEKSSWQYFK 85
Query: 341 DFEEIYGHQT 350
+ H T
Sbjct: 86 HLHFLDPHMT 95
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 348 HQTYCTTNNVKLVYKPNRDDYVRQLLLFYIENVDKF 383
H+ + NN+K V + RDD RQL L+ EN D F
Sbjct: 581 HRWHFARNNIKAVTESKRDD--RQLFLYVHENSDDF 614
>AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 363 PNRDDYVRQLLLFYIENVDKFRDPLIKKRTLWKKLSPQILLSPDECDRKFRNLKQT 418
PN D + + + F +E +D F DP+I K +WK + + PD ++ N Q+
Sbjct: 460 PNLDPEMEKCMDFLVEIIDNFTDPVI-KTDIWKLYYSR--MKPDVSEKVINNRFQS 512
>AF000196-10|AAC24250.1| 172|Caenorhabditis elegans Hypothetical
protein B0041.1 protein.
Length = 172
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 107 KTLWHDIASHVGTTADECCKKYRNLRRTYIRLLKKNRLGKEIKWVHYNTCE 157
K LW+ ++ G AD+ KK+ + + + + + +L +W ++N +
Sbjct: 7 KNLWNSMSDGAGLKADQLLKKFHSKGQPFATMSEATKLKLVAEWYYFNPAQ 57
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 30.7 bits (66), Expect = 2.5
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 96 LEDRFKNINKQKTLWHDIAS---HVGTTADECCKKYRNLRRTYIRLLKKNRLGKEIKWVH 152
LE KN+ K+ T+ D DE + Y+ + + + K ++ E K
Sbjct: 138 LEPVGKNVTKENTIEDDKKPDFCEYSNICDEFLENYQKMENEHNEMTSKYQILGENK-SE 196
Query: 153 YNTCEEVFKECKSLPSSFLETWDDQKVRKLLLLYIENLHRLRSSTCLQKDIWKEIALEIG 212
++ KEC+ FLE ++Q LL R + LQ+D+ K +
Sbjct: 197 LKEQDDSEKECEEQNGEFLEKLENQNKVNSKLLKEARRKREKRRRELQEDLEK-----MR 251
Query: 213 TTEYNCYHKFKNMKRAYLNWLERSKDTGKPIKWPY 247
+ C+ + + R ++ E+ ++ G IK Y
Sbjct: 252 QNQKQCFEAWLSGMRLRQHFNEKEQEVGNWIKKCY 286
>AL032631-6|CAA21574.1| 234|Caenorhabditis elegans Hypothetical
protein Y106G6H.4 protein.
Length = 234
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Query: 291 KKELWKEISETVGE----NPP----DCEKKFRNLKQTYIRIRSKV---ESGLAV-TKWRY 338
+K L+ E+ E + + +PP + EK ++NLK TY++ R K+ G + KW++
Sbjct: 76 RKNLFAEVVEVINQQFVLSPPLTIEEIEKHWKNLKDTYVKTRRKLTFDHDGCPIRPKWKF 135
Query: 339 Y 339
+
Sbjct: 136 F 136
>Z68343-2|CAA92779.1| 213|Caenorhabditis elegans Hypothetical
protein F59B8.1b protein.
Length = 213
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 158 EVFKECKSLPSSFLETWDDQKVRKLLLLYIENLHRLRSSTCLQKDIWK--EIALEIGTTE 215
E ++ K+ E + K L+ Y++ +R L+K WK I + GT +
Sbjct: 28 EPYRRLKNALKKLQEDYLKSKEANALMRYVKLGQSVREVAMLEKQYWKLLNIPAQEGTED 87
Query: 216 YNCY 219
NCY
Sbjct: 88 ANCY 91
>Z68343-1|CAD89741.1| 231|Caenorhabditis elegans Hypothetical
protein F59B8.1a protein.
Length = 231
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 158 EVFKECKSLPSSFLETWDDQKVRKLLLLYIENLHRLRSSTCLQKDIWK--EIALEIGTTE 215
E ++ K+ E + K L+ Y++ +R L+K WK I + GT +
Sbjct: 46 EPYRRLKNALKKLQEDYLKSKEANALMRYVKLGQSVREVAMLEKQYWKLLNIPAQEGTED 105
Query: 216 YNCY 219
NCY
Sbjct: 106 ANCY 109
>Z29095-6|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 286 NPRYLKKELWKEISETVGENPPDCEKKFRNLKQTYIRIRSKVES 329
N +KK++ K I+E V + + EK ++L++T +I SK+++
Sbjct: 327 NVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTDKIGSKIDN 370
>U80029-13|AAB37592.2| 429|Caenorhabditis elegans Hypothetical
protein T20D4.5 protein.
Length = 429
Score = 30.3 bits (65), Expect = 3.3
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 383 FRDPLIKKRTLWKKLSPQILLSPDECDRKFRNLKQTYIRLIERKRETGKNTKWPYFSYFE 442
F P+ T +K S + E R+ LK+ I+ + E+G+N +
Sbjct: 241 FPTPVSSNTTTSEKFSTSSRSNDTELLRRSEELKEQS-EYIQLQPESGQNHVKFTYDIIN 299
Query: 443 KIFDVPNQNARSVDNLTIHEIKRVVQE 469
I+ NQ+ V+ + IKRVV E
Sbjct: 300 NIYSHDNQDGSPVNPKQVFNIKRVVDE 326
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 431 KNTKWPYFSYFEKIFDVPNQNARSVDNLTIHEIKRVVQEMQDVRDTSKFDKLVQSMEESN 490
+N K PY S + I + + + +T E+++V+ M D +FDKLV E++
Sbjct: 72 RNNKIPY-SMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVAGQEDNG 130
Query: 491 MIQRE 495
I+ E
Sbjct: 131 KIKIE 135
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/41 (29%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 458 LTIHEIKRVVQEMQDVRDTSKFDKLVQSMEESNMIQRERNK 498
L I E +++++ + + DT+KF++L+ + E+++ +RE+ K
Sbjct: 963 LEIMEKRKIIEPNEIITDTNKFEELLVQL-ENHLSEREKEK 1002
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
protein T28B8.3a protein.
Length = 1838
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 360 VYKPNRDDYVRQLLLFYIENVDKFRDPLIKKRTLW--KKLSPQILLSPDECDRKFRNLKQ 417
V+ PN ++ Q+ +F + ++ F++ L K+R W +K S L + D ++
Sbjct: 312 VHPPNIGEHTDQISMFLEQFMESFKERLNKERLNWEKRKCSKDYYLKDSDIDAVVESISD 371
Query: 418 TYIRLI 423
I L+
Sbjct: 372 LAIMLM 377
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 305 NPPDCEKKFRNLKQTYIRIRSKVESGLAVTKW 336
+P DC R LK +IR+R+ E+ LAV K+
Sbjct: 239 SPFDCFLVNRGLKTLHIRMRAHYENALAVAKY 270
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,081,302
Number of Sequences: 27539
Number of extensions: 654983
Number of successful extensions: 1821
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1806
Number of HSP's gapped (non-prelim): 30
length of query: 507
length of database: 12,573,161
effective HSP length: 84
effective length of query: 423
effective length of database: 10,259,885
effective search space: 4339931355
effective search space used: 4339931355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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