Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002260-TA|BGIBMGA002260-PA|undefined
(499 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 30 0.65
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 30 0.65
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.86
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 29 1.5
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 1.5
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 29 2.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 28 2.6
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 28 2.6
SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme... 28 2.6
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 2.6
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 28 2.6
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 27 4.6
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 27 4.6
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 27 6.0
SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 27 8.0
SPAC1687.01 |rpc19|rpa17, SPAPYUL23.01|DNA-directed RNA polymera... 27 8.0
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 27 8.0
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 30.3 bits (65), Expect = 0.65
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 428 EMTAAWCIRRAELI--LKCVKGFMLEAAGWGGAELRTLQFAVPTNTAPEVFSTLANL 482
EM A+C++R+ L+ +K K L + G+ G QF P NTA V N+
Sbjct: 131 EMQGAFCLKRSILVHSVKSDKNTYLSSPGFYGTPQPLNQFTDPNNTAVYVHQLPENI 187
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.3 bits (65), Expect = 0.65
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 302 TEYHFHDVEYQLREISKKVKEPVERRNTQRSKEQNDSNNTQTHNNPFRNRWRQNLQTGDI 361
T H V+ QL E + +E R N+ R + + +NN + + P + N GD
Sbjct: 78 TAAHDDPVQRQLEEDERCARELANRYNSHRPERRRKTNNDRRNYPPQNRTAKPNDNDGDD 137
Query: 362 Y 362
Y
Sbjct: 138 Y 138
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 29.9 bits (64), Expect = 0.86
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 402 NILKAACSNDITSI-----SLPLL-LRHELS------EEMTAAWCIRRAELILKCVKGFM 449
++LK C+ + SI SLP+ L H LS E+T R L+ KG
Sbjct: 106 SVLKELCNTYLPSILSTYGSLPIRRLLHHLSLMLPSFNELTPTQQRRLLTRALESKKGIQ 165
Query: 450 LEAAGWGGAELRTLQFAVPTNTAPEVFSTLANLLPSIFRISNP 492
E GWG LR +P N+ P+ S +N +P + P
Sbjct: 166 FEKIGWGRWVLR--DSTIPANSHPQ--SLPSNSIPKTEPLDTP 204
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 309 VEYQLREISKKVKEPVERRNTQRSKEQNDSNNTQTHNNPFRNRWRQ 354
+E R +KE E + K + + NNT+ P R+RW Q
Sbjct: 176 MELNQRRREGTLKEVEEEESISDKKRELELNNTEISQKPKRSRWDQ 221
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/85 (20%), Positives = 36/85 (42%)
Query: 256 TESSRRLQTSLSLYSSELSAVILLXXXXXXXXXXXTTQLVDAAKSSTEYHFHDVEYQLRE 315
T++S++L +S + +S+ + + + T+ S D E+ ++
Sbjct: 193 TKASKKLTSSPTSVASKKATLSSVSKVASTSSLPVTSVSASVDPKSAASKVQDAEFSIQT 252
Query: 316 ISKKVKEPVERRNTQRSKEQNDSNN 340
KE E+ NT+ ++E S N
Sbjct: 253 APSFPKEKEEKENTEETEESKKSIN 277
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 110 RDDDIVKLTQKQTEEMEEKVRLLNTSTTEVEINEL--ATQQFEEQAL--VSGRWGSQLDA 165
RDDD ++ E+M + + +++ V +N L ++QFE AL ++ + S L A
Sbjct: 45 RDDDSGGSSESSNEDMRDNIPIVSGRKKTVRLNRLQRESEQFENSALKDINVEYQSNLSA 104
Query: 166 LCQTQRT 172
++ T
Sbjct: 105 TGESVNT 111
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 305 HFHDVEYQLREISKKVKEPVERRNTQRSKEQNDSNN--TQTHNNPFRNR 351
H + + RE S + ++R R +ND NN +THN+ +R+R
Sbjct: 176 HHRSNQDRSRERSDNEQHSSDKREHSRRSYRNDRNNWRERTHNDRYRHR 224
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 310 EYQLREISKKVKEPVERRNTQRSKEQNDSNNTQTHNNPFRNRWR 353
E + +E+SK + +R+ + K +N N + +NN RNR R
Sbjct: 554 EKEAKELSKMMMSNKQRKLYSKLKNENSKN--ENYNNALRNRKR 595
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 73 EEVFAVAYHKLVHSPALETILQVENSYAKTVMNTLK-------NRDDDIVKLTQKQTEEM 125
E +A ++L S +L I+ N A+ + TLK N D ++V+ ++K TE+
Sbjct: 255 ESAAGLAAYELEESSSLPAIVHGNNKNARKNIATLKSKIRDIVNSDANVVEQSEKTTEDA 314
Query: 126 EEK 128
+E+
Sbjct: 315 DEE 317
>SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme
Spe2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 359 GDIYLTKHSNLADVHVVFHLVADDSSLRSGDITSRHPVIL 398
GD Y+ + +NL+ H++ VAD+S +R TS +L
Sbjct: 225 GDDYVREKNNLSGGHILGSYVADESGVRDLCSTSDKKAVL 264
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 119 QKQTEEMEEKVRLLNTST-TEVEINELATQQFEEQAL 154
+K+ +E EE+VRLL S + E+NE +T E + L
Sbjct: 407 EKKKKEREEQVRLLQESADKDAEMNEASTATSENEDL 443
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 112 DDIVKLTQKQTEEMEEKVRLLNTSTTEVEINELATQQFEEQAL 154
+++V++ Q + + +EKVR+ T E E QF QAL
Sbjct: 355 ENVVQMLQSKLADTDEKVRVATLKTIEQLTFETFKMQFSVQAL 397
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 102 TVMNTLKNRDDDIVKLTQKQTEEMEEKVRLLNTSTTEVEINELATQQFEEQALVSGRWGS 161
T ++ +K R D+ +Q+ E++E RLL+ + + N L E L G+
Sbjct: 9 TDISQIKQRFHDLQVESQRTDEKLE---RLLSDAQPTEKFNSLIKNMAERLVLFVGQIEE 65
Query: 162 QLDALCQT 169
DA C T
Sbjct: 66 LKDAFCNT 73
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 89 LETILQVEN---SYAKTVMNTLKNRDDDIVKLTQKQTEEMEEKVRLLNTSTTEVE 140
LET+++ N S + + N L + + + +L ++QT+++ + +L T+E++
Sbjct: 95 LETLVEKYNLHMSGIENLENVLLEQKEQLQQLEKRQTDQVSARENILQRETSEIQ 149
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 315 EISKKVKEPVERRNTQRSKEQNDSNNTQTHNNPFRNRWRQNL 356
E K KE E+RNT+R K ++ + N N +Q +
Sbjct: 517 EAWSKQKEVKEKRNTRREKRKSKKEFLKAQKNEASNNLKQEI 558
>SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 340 NTQTHNNPFRNRWRQNLQTGDIYLTKHSN 368
N NPF N W + + GDI LT + N
Sbjct: 114 NVPMETNPFNN-WAKIVDCGDIPLTSYDN 141
>SPAC1687.01 |rpc19|rpa17, SPAPYUL23.01|DNA-directed RNA polymerase
I and III subunit Rpc19 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 125
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 81 HKLVHSPALETILQVENSYAKTVMNTLKNRDDDIVKLTQKQTEEMEEKVRLLNTSTTEVE 140
+ + H + +++ + + T ++ L+ DD++ L TE+ E++ ++T EV+
Sbjct: 65 YSIPHPSEAKMNFRIQTAPSTTAVDVLRKGLDDLIDLCDAVTEKFTEQLPRDTSTTMEVD 124
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 8.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 293 QLVDAAKSSTEYHFHDVEYQLREISKKVKEPVERRN-----TQRSKEQNDSNNTQTHNNP 347
Q + +S+ Y F Y +E KK++E ERRN + R + D + H+NP
Sbjct: 154 QTMSDGSTSSRYGF----YADKEQRKKLREEFERRNRMFASSARIQPNEDVQSVVVHSNP 209
Query: 348 -FRNRWRQ 354
++N+ Q
Sbjct: 210 SWKNKVEQ 217
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.129 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,118,796
Number of Sequences: 5004
Number of extensions: 83780
Number of successful extensions: 360
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 23
length of query: 499
length of database: 2,362,478
effective HSP length: 76
effective length of query: 423
effective length of database: 1,982,174
effective search space: 838459602
effective search space used: 838459602
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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