GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002258-TA|BGIBMGA002258-PA|undefined
         (114 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051945-1|AAK93369.1|  531|Drosophila melanogaster LD42037p pro...    29   1.5  
AE014297-887|AAF54343.1|  531|Drosophila melanogaster CG8420-PA ...    29   1.5  
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ...    28   2.5  
AF044202-1|AAC00192.1|  913|Drosophila melanogaster glutamate re...    27   5.9  
AE014296-1775|AAF50187.1|  186|Drosophila melanogaster CG14164-P...    27   5.9  
AE014134-944|AAF52269.3|  913|Drosophila melanogaster CG7234-PI ...    27   5.9  

>AY051945-1|AAK93369.1|  531|Drosophila melanogaster LD42037p
           protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 23  ALLGSTVDGFTVAYGGDAELIPCAGSSNGGGDEHGL 58
           +++G+ ++ FT   G D E  P    SNGGG E G+
Sbjct: 113 SIIGNVLEMFT--QGDDEEATPQQKRSNGGGSESGI 146


>AE014297-887|AAF54343.1|  531|Drosophila melanogaster CG8420-PA
           protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 23  ALLGSTVDGFTVAYGGDAELIPCAGSSNGGGDEHGL 58
           +++G+ ++ FT   G D E  P    SNGGG E G+
Sbjct: 113 SIIGNVLEMFT--QGDDEEATPQQKRSNGGGSESGI 146


>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
            protein.
          Length = 2296

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 47   GSSNGGGDEHG--LEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGPCSVTPPNPKFLH 104
            G   GGGD H    +G    V+ N   VL  +S V    + +   + P   TPP+ K   
Sbjct: 1994 GGGAGGGDNHDKTADGKTITVLSN---VLLTSSSVVSSSQHIPSISSP---TPPSKKLTP 2047

Query: 105  TPKASGKL 112
             PKA G +
Sbjct: 2048 LPKAGGSV 2055


>AF044202-1|AAC00192.1|  913|Drosophila melanogaster glutamate
           receptor DGluRIIB protein.
          Length = 913

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 47  GSSNGGGDEHGLEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGP 92
           GS +   DE   +G+I  +IDN A++  C+  +   +  VV+ T P
Sbjct: 482 GSYDANTDEW--DGIIRQLIDNNAQIGICDLTITQARRSVVDFTVP 525


>AE014296-1775|AAF50187.1|  186|Drosophila melanogaster CG14164-PA
          protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 20 RVAALLGSTVDGFTVAYG-GDAELIPCAGSSNGGGDE 55
          R     G  + G  VA+  G   LI    SSNGGGDE
Sbjct: 15 RCKTCFGDNISGEVVAFDLGVKMLIMKCPSSNGGGDE 51


>AE014134-944|AAF52269.3|  913|Drosophila melanogaster CG7234-PI
           protein.
          Length = 913

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 47  GSSNGGGDEHGLEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGP 92
           GS +   DE   +G+I  +IDN A++  C+  +   +  VV+ T P
Sbjct: 482 GSYDANTDEW--DGIIRQLIDNNAQIGICDLTITQARRSVVDFTVP 525


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.139    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,617,752
Number of Sequences: 52641
Number of extensions: 352487
Number of successful extensions: 625
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 6
length of query: 114
length of database: 24,830,863
effective HSP length: 75
effective length of query: 39
effective length of database: 20,882,788
effective search space: 814428732
effective search space used: 814428732
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)