GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002258-TA|BGIBMGA002258-PA|undefined
         (114 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.17 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.17 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   3.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   3.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   3.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   8.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.3  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 11/18 (61%), Positives = 12/18 (66%)

Query: 35  AYGGDAELIPCAGSSNGG 52
           A+GGD ELI   G S GG
Sbjct: 239 AFGGDPELITIFGESAGG 256


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 11/18 (61%), Positives = 12/18 (66%)

Query: 35  AYGGDAELIPCAGSSNGG 52
           A+GGD ELI   G S GG
Sbjct: 239 AFGGDPELITIFGESAGG 256


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 23  ALLGSTVDGFTVAYGGDAE 41
           A LG  V+G  +A+GG ++
Sbjct: 410 ATLGFRVEGIKLAHGGSSK 428


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 23  ALLGSTVDGFTVAYGGDAE 41
           A LG  V+G  +A+GG ++
Sbjct: 325 ATLGFRVEGIKLAHGGSSK 343


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 23  ALLGSTVDGFTVAYGGDAE 41
           A LG  V+G  +A+GG ++
Sbjct: 644 ATLGFRVEGIKLAHGGSSK 662


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 18  LDRVAALLGSTVDGFT 33
           LDR+ +L GST D  T
Sbjct: 579 LDRLDSLRGSTTDSQT 594


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 36  YGGDAELIPCAGSSNGGGDEH 56
           +GG+ + I   G S GG   H
Sbjct: 196 FGGNPKRITLIGLSAGGASVH 216


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 36 YGGDAELIPCAGSSNGGGDEH 56
          +GG+ + I   G S GG   H
Sbjct: 67 FGGNPKRITLIGLSAGGASVH 87


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 36  YGGDAELIPCAGSSNGGGDEH 56
           +GG+ + I   G S GG   H
Sbjct: 196 FGGNPKRITLIGLSAGGASVH 216


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.139    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,229
Number of Sequences: 429
Number of extensions: 1656
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 114
length of database: 140,377
effective HSP length: 50
effective length of query: 64
effective length of database: 118,927
effective search space:  7611328
effective search space used:  7611328
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)