GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002257-TA|BGIBMGA002257-PA|undefined
         (355 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       32   2.7  
BC039102-1|AAH39102.1|  268|Homo sapiens Unknown (protein for IM...    32   2.7  
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             32   2.7  
BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein.        31   8.1  

>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 2/125 (1%)

Query: 80   AEIKAIKSSYVTQDEMQDLRTKCDMISMSSTNINTKRGAFCNKIDMEFTSQESNSGCEEQ 139
            A+ K+ KS  VT+     L+     I+  + +I   +       + E    + N   E+Q
Sbjct: 2261 ADSKSWKSIVVTRMYETKLKELETDIAKKNQSITDLKQLVKEATEREQKVNKYNEDLEQQ 2320

Query: 140  VLIKNLSSNSINTENLI--EGSGIKLRRYELNGSDNNLSHHNVASKGNGNDESLLSSVDQ 197
            + I         TE  +  E   ++L  ++L+     L H   A+K     ES +   DQ
Sbjct: 2321 IKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAESTIPDADQ 2380

Query: 198  LSERI 202
            L E+I
Sbjct: 2381 LKEKI 2385


>BC039102-1|AAH39102.1|  268|Homo sapiens Unknown (protein for
           IMAGE:4829003) protein.
          Length = 268

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 18/160 (11%)

Query: 186 GNDESLLSSVDQLSERIIVPSLIAPSQSYAKVVAVQNNDGFTSVQSKKKRNNKFKXXXXX 245
           G +E L  S D + E+     L +  Q Y   +A   ++     +  KK  +K       
Sbjct: 102 GENEQLKISADLIKEK-----LKSHEQEYKNNIAKLVSEMKIKEEGYKKEISKLYQDMQR 156

Query: 246 XXXESNEKFRSADRKTPMFITNVNKATLESDITDYIYKKTGENVTLEGINIKQQCEHNAY 305
               + EK +    K  M I+ +N A L S + +    K  E        IK Q E +A 
Sbjct: 157 KVELNEEKHKELIEKKEMEISELN-AKLRSQVKE----KQNEI-------IKLQLEFDA- 203

Query: 306 KFIVSQRKLHMFMDDKLWPEGIIFRRFVHYRPKRNNETSV 345
           K    Q K   + D  + P+ I  R+  H++ ++N E ++
Sbjct: 204 KLARVQTKSKSYQDSTVLPQSIYRRKLQHFKEEKNKEIAI 243


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 2/125 (1%)

Query: 80   AEIKAIKSSYVTQDEMQDLRTKCDMISMSSTNINTKRGAFCNKIDMEFTSQESNSGCEEQ 139
            A+ K+ KS  VT+     L+     I+  + +I   +       + E    + N   E+Q
Sbjct: 1322 ADSKSWKSIVVTRMYETKLKELETDIAKKNQSITDLKQLVKEATEREQKVNKYNEDLEQQ 1381

Query: 140  VLIKNLSSNSINTENLI--EGSGIKLRRYELNGSDNNLSHHNVASKGNGNDESLLSSVDQ 197
            + I         TE  +  E   ++L  ++L+     L H   A+K     ES +   DQ
Sbjct: 1382 IKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAESTIPDADQ 1441

Query: 198  LSERI 202
            L E+I
Sbjct: 1442 LKEKI 1446


>BC066592-1|AAH66592.1| 1516|Homo sapiens CUTL1 protein protein.
          Length = 1516

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 169 NGSDNNLSHHNVASKGNGNDESLLSSVDQLSERIIVPSLIAPSQSYAKVVAVQNNDGFTS 228
           NGS+ N++    AS+  G+DE++ S ++Q    + V     P+Q  +   +  ++D   S
Sbjct: 661 NGSEGNITTRIRASE-TGSDEAIKSILEQAKRELQVQKTAEPAQPSSASGSGNSDDAIRS 719

Query: 229 VQSKKKR 235
           +  + +R
Sbjct: 720 ILQQARR 726


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.313    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,832,070
Number of Sequences: 224733
Number of extensions: 1533689
Number of successful extensions: 2604
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2601
Number of HSP's gapped (non-prelim): 7
length of query: 355
length of database: 73,234,838
effective HSP length: 91
effective length of query: 264
effective length of database: 52,784,135
effective search space: 13935011640
effective search space used: 13935011640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)