GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002255-TA|BGIBMGA002255-PA|undefined
         (53 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7T140 Cluster: Predicted protein; n=3; Nematostella ve...    33   1.1  
UniRef50_A6AL81 Cluster: OmpA family protein; n=1; Vibrio harvey...    31   3.5  
UniRef50_A5DV15 Cluster: Putative uncharacterized protein; n=1; ...    31   3.5  

>UniRef50_A7T140 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 202

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 6   LRNFQDKLPYLQVPNNNIRTVGLANNITRSVEH 38
           LRN   KL +L + NNNIR  G ANNI  ++ H
Sbjct: 76  LRNKNCKLTHLNISNNNIRDEG-ANNIGEALRH 107


>UniRef50_A6AL81 Cluster: OmpA family protein; n=1; Vibrio harveyi
           HY01|Rep: OmpA family protein - Vibrio harveyi HY01
          Length = 1563

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 2   SESHLRNFQDKLPYLQVPNNNIRTVGLANNITRSVE 37
           S S +R F ++ P ++VPNN I+      NI R VE
Sbjct: 692 SVSDIRFFGERRPIVEVPNNEIKRENAQLNINRRVE 727


>UniRef50_A5DV15 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 779

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 6   LRNFQDKLPYLQVPNNNIRTVGLANNITRSVEHLPFVVYSHTGDP 50
           ++N  DK   L V +N++    LA ++   +  LPF   SH G+P
Sbjct: 280 IKNIFDKNLILMVEDNSLLDQSLATSVLNLMSVLPFFYKSHIGNP 324


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,202,814
Number of Sequences: 1657284
Number of extensions: 1846673
Number of successful extensions: 3825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3823
Number of HSP's gapped (non-prelim): 3
length of query: 53
length of database: 575,637,011
effective HSP length: 33
effective length of query: 20
effective length of database: 520,946,639
effective search space: 10418932780
effective search space used: 10418932780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)