Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002254-TA|BGIBMGA002254-PA|undefined
(189 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 1.9
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 23 1.9
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 7.5
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 7.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 85 FSHEVDHPKNVPNYFTVDNVKHNTESAND 113
F HEVD N N+ +D N +S ++
Sbjct: 525 FGHEVDLVHNYMNFMQMDEFVVNLKSGSN 553
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 85 FSHEVDHPKNVPNYFTVDNVKHNTESAND 113
F HEVD N N+ +D N +S ++
Sbjct: 151 FGHEVDLVHNYMNFMQMDEFVVNLKSGSN 179
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 26 FFVVPKEPGFDSHLSSDITYVVK 48
F +PKE GF S+ ++ V++
Sbjct: 60 FVRIPKEQGFLSYWRGNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 26 FFVVPKEPGFDSHLSSDITYVVK 48
F +PKE GF S+ ++ V++
Sbjct: 60 FVRIPKEQGFLSYWRGNLANVIR 82
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 350 DDIRHKNSAANPPSGYI 366
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 418 DDIRHKNSAANPPSGYI 434
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 102 DNVKHNTESANDDAAYI 118
D+++H +AN + YI
Sbjct: 418 DDIRHKNSAANPPSGYI 434
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.131 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,885
Number of Sequences: 429
Number of extensions: 2071
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 189
length of database: 140,377
effective HSP length: 54
effective length of query: 135
effective length of database: 117,211
effective search space: 15823485
effective search space used: 15823485
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)
- SilkBase 1999-2023 -