GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002253-TA|BGIBMGA002253-PA|undefined
         (179 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.20 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.20 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.27 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.8  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 89  TALLGSIVLLIFGIYWLVSGLKDHLAISYIALGLFVPGP 127
           T L  + V L+F +++    +K H+  S I+L  ++PGP
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIKQHI-YSLISLS-YLPGP 42


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 89  TALLGSIVLLIFGIYWLVSGLKDHLAISYIALGLFVPGP 127
           T L  + V L+F +++    +K H+  S I+L  ++PGP
Sbjct: 6   TVLTAAAVFLLFYLFYCYKTIKQHI-YSLISLS-YLPGP 42


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 139 SVLCNLINVCLIRLRSYLLERDPPPPTIKVDN 170
           SVLC +    ++ LR+   E  P P  +++DN
Sbjct: 76  SVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDN 107


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query: 113 LAISYIALGLFVP 125
           L ++ +ALGLFVP
Sbjct: 8   LCLATLALGLFVP 20


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 135 ILITSVLCNLINVCLIRLRSYLLE 158
           IL+    C+L+ +CL   +  L E
Sbjct: 252 ILVVQFFCSLVALCLTMYKLSLTE 275


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.329    0.146    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,884
Number of Sequences: 317
Number of extensions: 1735
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 179
length of database: 114,650
effective HSP length: 53
effective length of query: 126
effective length of database: 97,849
effective search space: 12328974
effective search space used: 12328974
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 41 (20.6 bits)