GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002253-TA|BGIBMGA002253-PA|undefined
         (179 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    25   1.8  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   3.1  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   7.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   9.5  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 9   MVHVMXXXXIRDINDRDHLRRLIVYPPPVLSYAVYIAVIVVLFVQLAFGL-----VAASL 63
           + HV     + ++   D     I YP  +  + V      VLF  + F L     VA + 
Sbjct: 387 LAHVTGKTDVGNVVKSDAGLAFISYPEAIAKFEVLPQAFSVLFFLMLFVLGIGSNVAMTS 446

Query: 64  AILNATKNPTEPIFGLPGCLWANVLTALLGSIVLLIFGIYWLVSGLKDHLAISYIALGLF 123
            ++   K+    +          +   LLGSI +   G    V  L D+   S IAL L 
Sbjct: 447 CVMTVIKDQFPRVRNWQAATIIAICGVLLGSIYVTPGG--QCVLKLVDYYGASSIALVLA 504

Query: 124 V 124
           +
Sbjct: 505 I 505


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 52  VQLAFGLVAASLAILNATKNPTEPIFG---LPGCLWANVLTALLGSIVLLIFG 101
           VQ A G VA    + N  +   E  +       C+ + +LTA LG+I++ + G
Sbjct: 526 VQAALGPVALKTVMSNENRTEEEVHYAELVKMVCILSIILTAPLGAILISVTG 578


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
          carrier protein A5 protein.
          Length = 211

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 48 VVLFVQLAFGLVAASLAILNATKNPTEPIFG 78
          ++L V +A G V A + +     NPT   FG
Sbjct: 3  LLLRVTVACGAVLALVTVRGQAANPTTEAFG 33


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 38   LSYAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTALLGSIVL 97
            LS +  IA++V   +  A+ ++AAS    + T +PT+  +  PG  W  ++  +  S  +
Sbjct: 2803 LSLSTSIAIMVGTGITFAYFMMAAS----SGTWDPTKFDYSSPG-TWNALMNGVATSSWI 2857

Query: 98   LI 99
            L+
Sbjct: 2858 LM 2859


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.329    0.146    0.460 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,754
Number of Sequences: 2123
Number of extensions: 7384
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 179
length of database: 516,269
effective HSP length: 60
effective length of query: 119
effective length of database: 388,889
effective search space: 46277791
effective search space used: 46277791
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 45 (22.2 bits)