Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002253-TA|BGIBMGA002253-PA|undefined
(179 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19152-4|CAA79538.2| 455|Caenorhabditis elegans Hypothetical pr... 31 0.36
AY533305-1|AAS21307.1| 455|Caenorhabditis elegans BRE-3 protein. 31 0.36
AL021488-6|CAA16366.2| 272|Caenorhabditis elegans Hypothetical ... 31 0.36
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81474-8|CAH60750.1| 305|Caenorhabditis elegans Hypothetical pr... 29 1.9
U70857-4|AAN84872.1| 405|Caenorhabditis elegans Na/ca exchanger... 28 3.3
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 28 3.3
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 28 3.3
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 28 3.3
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 28 3.3
U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine rece... 27 5.8
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 5.8
AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei) ig-d... 27 5.8
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 5.8
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 27 5.8
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 27 5.8
Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z19152-4|CAA79538.2| 455|Caenorhabditis elegans Hypothetical
protein B0464.4 protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.36
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 46 VIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTALLGSIVLLIFGIYWL 105
+ VV LA L A + L + + P+F LP CL + L + +G++ L ++ I+ +
Sbjct: 339 IAVVHKALLALSLYAWATMPLTSLQVFLCPLFPLPRCLPFDFLLSFVGALNLYMY-IFGV 397
Query: 106 VSGLKDHLAISYIALGLFVPGPSLGYSYWILITSVLCNLINVCLIRLRSYLLERD 160
V S + L +++ G + + ILI + L+ + + + Y++ +D
Sbjct: 398 VKSFSHKYRNSLLRLAMYLAGALMTIPFNILIENAAV-LVGMFGRKDQFYIVNKD 451
>AY533305-1|AAS21307.1| 455|Caenorhabditis elegans BRE-3 protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.36
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 46 VIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTALLGSIVLLIFGIYWL 105
+ VV LA L A + L + + P+F LP CL + L + +G++ L ++ I+ +
Sbjct: 339 IAVVHKALLALSLYAWATMPLTSLQVFLCPLFPLPRCLPFDFLLSFVGALNLYMY-IFGV 397
Query: 106 VSGLKDHLAISYIALGLFVPGPSLGYSYWILITSVLCNLINVCLIRLRSYLLERD 160
V S + L +++ G + + ILI + L+ + + + Y++ +D
Sbjct: 398 VKSFSHKYRNSLLRLAMYLAGALMTIPFNILIENAAV-LVGMFGRKDQFYIVNKD 451
>AL021488-6|CAA16366.2| 272|Caenorhabditis elegans Hypothetical
protein Y45F10A.3 protein.
Length = 272
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 95 IVLLIFGIYWLVSGLKDHLAISYIALGLFVPGPSLGYSY 133
+ ++I G YWL+ K LA+ ++A L S+GY Y
Sbjct: 70 VFIMIHGGYWLIGNRKKCLAVVHVAQKLGYTVVSVGYDY 108
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 41 AVYIAVIVVLF-VQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTALLGSIVLLI 99
AV+ +I++LF V + + ++I K P L C + L+ ++V+LI
Sbjct: 5 AVFTTLILILFSVFICYLNFLLLISIFWRKKIPVNLHMMLTYCRFG---VDLVYTVVILI 61
Query: 100 FGIYWLVSGLKDHLAISYIALGLFVPGPSLG 130
IY+L++ + I + L +P S+G
Sbjct: 62 LKIYFLLTQISTDFIIKNVHFSLVIPAASIG 92
>Z81474-8|CAH60750.1| 305|Caenorhabditis elegans Hypothetical
protein C18D4.5 protein.
Length = 305
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 30 LIVYPPPVLSYAVYIAVIVVLFVQLAFGLVAASLAI----LNATKNPTEPIFGLPGCLWA 85
L+ P +L+ +YI+ IVV V + G++ + I +N +++ +F L +
Sbjct: 6 LLQNSPTLLNQIIYISYIVVTIVFIVCGVLLLPIYIYVVKINKSRDKEIHLFALTTLFYG 65
Query: 86 NVLTALLGSIVLLIFGIYWLVSGLKDHL 113
++ L + IF I++LV +D +
Sbjct: 66 MIVQMYL---IATIFVIFYLVLNFEDDI 90
>U70857-4|AAN84872.1| 405|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformc protein.
Length = 405
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 87 VLTALLGSIVLLIFGIYWLVSGLKDHL-AISYIALGLFVP 125
VLTA++G + FG W+ GLKD + AIS++ALG VP
Sbjct: 270 VLTAVVGDLASQ-FGC-WV--GLKDAVTAISFVALGTSVP 305
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 87 VLTALLGSIVLLIFGIYWLVSGLKDHL-AISYIALGLFVP 125
VLTA++G + FG W+ GLKD + AIS++ALG VP
Sbjct: 815 VLTAVVGDLASQ-FGC-WV--GLKDAVTAISFVALGTSVP 850
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 87 VLTALLGSIVLLIFGIYWLVSGLKDHL-AISYIALGLFVP 125
VLTA++G + FG W+ GLKD + AIS++ALG VP
Sbjct: 815 VLTAVVGDLASQ-FGC-WV--GLKDAVTAISFVALGTSVP 850
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 87 VLTALLGSIVLLIFGIYWLVSGLKDHL-AISYIALGLFVP 125
VLTA++G + FG W+ GLKD + AIS++ALG VP
Sbjct: 765 VLTAVVGDLASQ-FGC-WV--GLKDAVTAISFVALGTSVP 800
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 87 VLTALLGSIVLLIFGIYWLVSGLKDHL-AISYIALGLFVP 125
VLTA++G + FG W+ GLKD + AIS++ALG VP
Sbjct: 765 VLTAVVGDLASQ-FGC-WV--GLKDAVTAISFVALGTSVP 800
>U88170-9|AAB42243.2| 348|Caenorhabditis elegans Serpentine
receptor, class h protein51 protein.
Length = 348
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 120 LGLFVPGPSLGYSYWILITSV-LCNLINVCLI 150
L LFVP LGY IL+TS L LINVC++
Sbjct: 272 LVLFVPFIMLGY---ILVTSANLQGLINVCIL 300
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 40 YAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTAL 91
Y ++IA ++ V + FG S + LN T+ FG+ LW ++T++
Sbjct: 978 YVIWIATMISQVVIIQFGGRWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSI 1029
>AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei)
ig-domain protein protein7 protein.
Length = 239
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 18 IRDINDRDHLRRLIVYPPPVLSYAVYIAVIVVL 50
+R ++ H LI+Y PPVL + + V VL
Sbjct: 108 VRTLDKEIHSGNLIIYMPPVLDFPAAVRVSEVL 140
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 40 YAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTAL 91
Y ++IA ++ V + FG S + LN T+ FG+ LW ++T++
Sbjct: 978 YVIWIATMISQVVIIQFGGRWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSI 1029
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform a protein.
Length = 1160
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 40 YAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTAL 91
Y ++IA ++ V + FG S + LN T+ FG+ LW ++T++
Sbjct: 978 YVIWIATMISQVVIIQFGGRWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSI 1029
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform c protein.
Length = 1137
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 40 YAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTEPIFGLPGCLWANVLTAL 91
Y ++IA ++ V + FG S + LN T+ FG+ LW ++T++
Sbjct: 978 YVIWIATMISQVVIIQFGGRWFSTSALNTTEWLWCLAFGVGTLLWGQIVTSI 1029
>Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical
protein F22D6.11 protein.
Length = 440
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 39 SYAVYIAVIVVLFVQLAFGLVAASLAILNATKNPTE 74
S Y A+++ L++ + LV L LN+++NP E
Sbjct: 10 SLVTYAALVIFLYLFIVKPLVPRILESLNSSRNPQE 45
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.329 0.146 0.460
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,640,934
Number of Sequences: 27539
Number of extensions: 175548
Number of successful extensions: 644
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 638
Number of HSP's gapped (non-prelim): 19
length of query: 179
length of database: 12,573,161
effective HSP length: 77
effective length of query: 102
effective length of database: 10,452,658
effective search space: 1066171116
effective search space used: 1066171116
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 57 (27.1 bits)
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