Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002252-TA|BGIBMGA002252-PA|undefined
(236 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20431-1|AAA52702.1| 582|Homo sapiens Huntington disease-associ... 35 0.28
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 35 0.28
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 35 0.28
X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin rela... 30 8.1
AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin (homologous to... 30 8.1
>L20431-1|AAA52702.1| 582|Homo sapiens Huntington
disease-associated protein protein.
Length = 582
Score = 34.7 bits (76), Expect = 0.28
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 DPDVLMTSMERITLLYKTLKQTKERESKRIIVAALKYFLRETLPPAATLSRVVLEFL 58
D + ++ +MER+++L+ +++ E+ R++ L FL + PP +++V+ EFL
Sbjct: 387 DSESVIVAMERVSVLFDRIRKGFPCEA-RVVARILPQFLDDFFPPQDIMNKVIGEFL 442
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 34.7 bits (76), Expect = 0.28
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 DPDVLMTSMERITLLYKTLKQTKERESKRIIVAALKYFLRETLPPAATLSRVVLEFL 58
D + ++ +MER+++L+ +++ E+ R++ L FL + PP +++V+ EFL
Sbjct: 2949 DSESVIVAMERVSVLFDRIRKGFPCEA-RVVARILPQFLDDFFPPQDIMNKVIGEFL 3004
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 34.7 bits (76), Expect = 0.28
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 DPDVLMTSMERITLLYKTLKQTKERESKRIIVAALKYFLRETLPPAATLSRVVLEFL 58
D + ++ +MER+++L+ +++ E+ R++ L FL + PP +++V+ EFL
Sbjct: 2949 DSESVIVAMERVSVLFDRIRKGFPCEA-RVVARILPQFLDDFFPPQDIMNKVIGEFL 3004
>X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin related
protein) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
>AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin (homologous to
dystrophin) protein.
Length = 3433
Score = 29.9 bits (64), Expect = 8.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MDPDVLMTSMERITLLYKTLKQTK 24
+DPDV+ T +++ LYKTL + K
Sbjct: 1466 VDPDVIQTHLDKCMKLYKTLSEVK 1489
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,035,227
Number of Sequences: 224733
Number of extensions: 809108
Number of successful extensions: 1990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1983
Number of HSP's gapped (non-prelim): 10
length of query: 236
length of database: 73,234,838
effective HSP length: 88
effective length of query: 148
effective length of database: 53,458,334
effective search space: 7911833432
effective search space used: 7911833432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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