GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002250-TA|BGIBMGA002250-PA|IPR000091|Huntingtin
         (831 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   6.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 137 AQFLFPKLSQIVKETNEIQLIVEALESNLPRLLNALGEYTS 177
           A F+     ++++E N+I+LI   +  +  R  N LG++ +
Sbjct: 240 ALFVIYLCGRVMEEQNKIRLITFEMNKSFERDKNKLGDFVA 280


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 111 WIRAALSRICLGECWLRPGVGKIRNQAQFLFPKLSQIVK-ETNEIQLIVEALESNLP 166
           W+   LS I L +  L+  V  I +QA  L      +   ET+E+Q+ ++ ++ N P
Sbjct: 162 WV-GILSTIFLCDTILKK-VDDILSQAYKLEASFDDLATYETDEVQIFIDVVQHNRP 216


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,023
Number of Sequences: 317
Number of extensions: 6145
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 2
length of query: 831
length of database: 114,650
effective HSP length: 63
effective length of query: 768
effective length of database: 94,679
effective search space: 72713472
effective search space used: 72713472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)