Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002250-TA|BGIBMGA002250-PA|IPR000091|Huntingtin
(831 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05) 74 5e-13
SB_31842| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.18
SB_8592| Best HMM Match : HEAT (HMM E-Value=2.5) 32 1.6
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.2
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 31 2.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.9
SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.9
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 31 3.8
SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07) 31 5.0
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.0
SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.0
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 31 5.0
SB_12133| Best HMM Match : DUF827 (HMM E-Value=0.64) 31 5.0
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 30 8.8
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.8
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 30 8.8
SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4) 30 8.8
SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092) 30 8.8
SB_13503| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.8
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 30 8.8
>SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05)
Length = 872
Score = 73.7 bits (173), Expect = 5e-13
Identities = 41/106 (38%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 404 LSRDLSEKLKEFE--ETDSTDTDLEKCSHDAGFKINIGSVADDDVPLKYCVRLLASKFLL 461
LS DL E ++ E T+S T + ++ F+I +VA + VPL +CVRL+ S FLL
Sbjct: 282 LSADLGELGQDLEPIRTESVSTQEVRILVESSFEIE--AVACEGVPLVHCVRLMCS-FLL 338
Query: 462 AGNKGDLIPDRSVRVSLKASALNCISEVVQVYPQAMTLYLDKDADA 507
G G+++PD +VRVS+K+ AL CI++ +++YP++ Y+ D+
Sbjct: 339 TGRPGEVLPDSNVRVSVKSLALACIAQAIRLYPESFLGYVVPSCDS 384
Score = 33.1 bits (72), Expect = 0.94
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 687 DSKDEKDFEFQHLSDVFLLLEGHCDPQIRGLVRVCIGNYLAAALNASHGDYNRWRN 742
D + D Q + D+ L H DPQ+RG + IG ++A + D+ W N
Sbjct: 386 DGVNVPDNRTQLVRDI-LQFNAHPDPQLRGALASVIGLVISAGMKKGRLDFEEWSN 440
>SB_31842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 35.5 bits (78), Expect = 0.18
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 404 LSRDLSEKLKEFE--ETDSTDTDLEKCSHDAGFKINIGSVADDDVPLKYCVRLLASKFLL 461
LS DL E ++ E T+S T + ++ F+I +VA + VPL +CVRL+ S FLL
Sbjct: 63 LSADLGELGQDLEPIRTESVSTQEVRILVESSFEIE--AVACEGVPLVHCVRLMCS-FLL 119
Query: 462 AG 463
G
Sbjct: 120 TG 121
>SB_8592| Best HMM Match : HEAT (HMM E-Value=2.5)
Length = 61
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 48 RHYANLLHSAIPTLLFLASHDSAEVRLVGDEALNRAVVG 86
+ + LL I TLL D ++VRLV EALN+ + G
Sbjct: 4 QEFPKLLAIGIDTLLGSCDEDESDVRLVAGEALNKLIKG 42
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 531 LERNVCYQDSLTDSLSQELNRSIEGHSICKKDIKSLEKS-TDSGEKSSKDAPSIDSKHKT 589
+E + ++S SL +EL R +G KK I SLE+S + + K S+DS H +
Sbjct: 793 VEGKLVTRESEVKSLREELTRMQQGSEELKKKIASLEESLIKANNEIGKSQESLDSIHNS 852
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 31.5 bits (68), Expect = 2.9
Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 5/175 (2%)
Query: 404 LSRDLSEKLKEFEETDSTDTDLEKCSHDAGFKINIGSVADDDVPLKYCVRLLASKFL-LA 462
L +D+S+K E + + L++ S F+ + + LK + L K ++
Sbjct: 336 LEKDISKKKNEIRRLRTELSQLQENSKHKHFEKELEGRKAEIKQLKTEINQLQQKLKEIS 395
Query: 463 GNKGDLIPDRSVRVSLKASALNCISEVVQVYPQAMTLYLDKDADAKIHNISGSSEGTDSN 522
G K +L R +L +C E +A L K+ K I SE +
Sbjct: 396 GLKSELQKIREQNKNLNEIVFSCRKE--NTAQKATVAKLQKEVFLKESKIKVCSEESTKQ 453
Query: 523 QDNINEYILERNVCYQDSLTDSLSQELN--RSIEGHSICKKDIKSLEKSTDSGEK 575
+ + I+E++V +D E+N R + + + + LE ++ EK
Sbjct: 454 ISELKQQIMEKDVVIRDLRKAVSEDEINSRRHQQQCEVVEALVNRLEVVSELAEK 508
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 2.9
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 477 SLKASALNCISEVVQVYPQAMTLYLDKDADAKIHNISGSSEGTDSNQDNINEYILERNVC 536
++K S LN E+ ++ + LD D + EG ++N+DN + E
Sbjct: 1080 TMKESLLNANREIGRLKCENTAKNLDADRKEDQEDEEVQREG-ENNKDNTAADVAE---- 1134
Query: 537 YQDSLTDSLSQELNRSIEGHSICKKDIKSLEKSTDSGEKSSKD 579
T++L + + +E K D+K+L+K D KS +
Sbjct: 1135 -----TNALKERVQNLLEAVETAKSDLKTLQKEKDETTKSENE 1172
>SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 TSDEEISELS-KAILLHVETTEASVRRGIATCIAHMCSH 213
T D EISEL K I H +T + + + TC H C H
Sbjct: 253 TGDMEISELRVKNIDAHADTLKTHLHTHMQTCYRHACRH 291
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 31.1 bits (67), Expect = 3.8
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 488 EVVQVYPQAMTLYLDKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLT--DSL 545
++V +A K + HN +S+ D D++N++ N D T +L
Sbjct: 323 DIVDQVQRANVASTPKTRGDREHNEEVTSQSHDEQTDSVNDHSPTANKNNNDDTTPNTAL 382
Query: 546 SQELNRSIEGHSICKKDI---KSLEKSTDSGEKSSKDAPS 582
S + RS G+ I K D+ S EK S + P+
Sbjct: 383 SDKCERSSSGNVIRKLDVVISTSKEKYKQENPASQNETPA 422
>SB_56089| Best HMM Match : CLN3 (HMM E-Value=9.8e-07)
Length = 554
Score = 30.7 bits (66), Expect = 5.0
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 502 DKDADAKIHNI-SGSSEGTDS-NQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSIC 559
D AD + I S +E T S NQD INE + N ++ D ++ + S E H +
Sbjct: 12 DSSADVRTDRIQSCQTEETVSWNQDCINESQISGNEASRNHSNDQKNEPESVSSEKHLLS 71
Query: 560 KKD--IKSLEKSTDSGEKSSKDAPSIDS 585
+ + K E S+ E+ S P++DS
Sbjct: 72 QMENLEKEQENSSHVTEERSSLQPNVDS 99
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 30.7 bits (66), Expect = 5.0
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 687 DSKDEKDFEFQHLSDVFLLLEGH-CDPQIRGLVRVCIGNYLAAALNASHGDYNRWRNFNS 745
D+K EK +V + E C+ +IRG+V I + AAA S+ YN+ +
Sbjct: 1282 DTKQEKAVTHLFSVEVRNVKEAPTCEAEIRGMVFNFIIDSGAAANIVSNQLYNKIKRDVV 1341
Query: 746 LPKAVGDCMSAGDLVQIILKGLRDEIHSTVNHSLSALTGLAVALSASSDWSLLVDALTS- 804
L K + G V + LKG E TVN + AL V +S +L+ + +
Sbjct: 1342 LRKTTKKLFAFGQSVPLKLKG-EFEAEITVNDN-KALANFYVFNGKASVNNLISNKTANE 1399
Query: 805 --LVHVEANTYWLCRVNL 820
L+HV + T C +L
Sbjct: 1400 LRLLHVNSVTGQQCHASL 1417
>SB_43065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 651 TTNLDNLKDLERKTDRTKRALKRTDEVQSADVEGLVDSKDEKDFEFQHLSDVFLLLE 707
T+N DN++ DR LK+T+ V A+++ +D E E Q LL+
Sbjct: 278 TSNFDNIRGERDLLDREVMDLKKTNTVLEANLKSKIDELGEYQKEMQATKQSLALLK 334
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 50 YANLLHSAIPTLLFLASHDSAEVRLVGDEALNRAVVGGFAF 90
YANL + T L AS+D+ EV L D LN+ + GF F
Sbjct: 1304 YANLRSDSARTWLIAASNDNKEVTL-KDVELNKTLYEGFRF 1343
>SB_12133| Best HMM Match : DUF827 (HMM E-Value=0.64)
Length = 325
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 662 RKTDRTKRALKRTDEVQSADVEGLVDSKDEKDFEFQHLSDVFLLLEGHCDPQIRG 716
R D + +L+ T + A+++ L+ KD E Q L LLE D IRG
Sbjct: 40 RLRDASIASLQNTLGTKDAELQKLMQLVSSKDLELQRLMGSKQLLENRLDDNIRG 94
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 543 DSLSQELNRSIEGHSICKKDIKSLEKSTDSGEKSSKDAPSIDSKHKTDL 591
DSL+Q+L ++ KK+ + ++ + S+K+A + SKHK DL
Sbjct: 209 DSLNQQLTER-RARALEKKENELFKEIKEQAHLSAKEADRLMSKHKEDL 256
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 547 QELNRSIEGHSICKKDIKSLEKSTDSGEKSSKDAPSIDSKHKTD---LMGSAMTDSTNP 602
+++ +S+EG S K D S+E ST E S+ A D D G+A +S +P
Sbjct: 157 KDVQKSMEGESQRKSDGTSVENSTARSETSTTSAEQNDQNEGEDSNSSSGAAKAESDSP 215
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 501 LDKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICK 560
+D D + N+ GS++ + +Y+ ++ + +T S++ +E I K
Sbjct: 268 IDIDVEELSKNLVGSNDRQHQQHVDPVDYVDRKSESSKSKVTKKRSED---GLEVKEIKK 324
Query: 561 KDIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDST 600
K S +S G+K+ DA S+ H T + +D T
Sbjct: 325 KS--SSPQSAQKGKKNETDAKSLSPAHLTVNVTETKSDKT 362
>SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4)
Length = 409
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 474 VRVSLKASALN-CISEVVQ-VYPQAMTLYLDKDADAKIHNISGSSEGTDSNQDNINEY 529
+RVSL S + C+ +VQ V+P + K+ D++I + S S++D+I Y
Sbjct: 293 IRVSLTLSYIRLCVGAIVQGVFPSWAIVRETKERDSRIFFVFARSVSLSSDKDSILRY 350
>SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092)
Length = 783
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 46 CARHYANLLHSAIPTLLFLASHDS--AEVRLVGDEALNRAVVGG 87
CAR + +HSA+ L L SH + ++RL DE+L GG
Sbjct: 629 CARDETSAIHSAVGLLPVLESHIALYCDLRLDKDESLTSTYSGG 672
>SB_13503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 501 LDKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICK 560
L D K+ + S++ D+ +NIN ++E+ CY L + E + S E + +
Sbjct: 514 LPSDCQVKL-DPQRSADSADTVLNNINHSVIEKMRCYLGLLRFA---EYSVSPEMQKVLQ 569
Query: 561 KDIKSLEKSTDSGEKSSKD 579
+D S+ + TD G+ S+ D
Sbjct: 570 EDFVSVRQQTD-GKMSADD 587
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 29.9 bits (64), Expect = 8.8
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 723 GNYLAAALNASHGDYNRWRNFNSLPKAVGDCMSAGDLVQIILKGLRDEIHSTVNHSLSAL 782
G Y A N SHG+ N++ V +S D + I R +H T+ +++AL
Sbjct: 628 GRYTCTARN-SHGEDRVSSTLNTMDPVVPKILSPDD-PRTIHPDHRSRVHGTIGDNITAL 685
Query: 783 TGLAVAL 789
T V L
Sbjct: 686 TDTLVTL 692
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,316,700
Number of Sequences: 59808
Number of extensions: 930349
Number of successful extensions: 2757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2744
Number of HSP's gapped (non-prelim): 28
length of query: 831
length of database: 16,821,457
effective HSP length: 88
effective length of query: 743
effective length of database: 11,558,353
effective search space: 8587856279
effective search space used: 8587856279
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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