GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002250-TA|BGIBMGA002250-PA|IPR000091|Huntingtin
         (831 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    31   0.12 
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    31   0.12 

>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 31.1 bits (67), Expect = 0.12
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 268 DYMELYN-LCVNYVDQSTDHNIQNCVMECLTVILSKAAGAYRAAVLEKHPAR 318
           DY +LY+ L +  +D+  D N++ C+ EC+ V  S+ A  +   +L+    R
Sbjct: 74  DYHKLYDPLNIIELDKRHDVNLEKCIGECVQVPTSERAHVFYKCLLKSTTGR 125


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 31.1 bits (67), Expect = 0.12
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 268 DYMELYN-LCVNYVDQSTDHNIQNCVMECLTVILSKAAGAYRAAVLEKHPAR 318
           DY +LY+ L +  +D+  D N++ C+ EC+ V  S+ A  +   +L+    R
Sbjct: 74  DYHKLYDPLNIIELDKRHDVNLEKCIGECVQVPTSERAHVFYKCLLKSTTGR 125


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,612
Number of Sequences: 2123
Number of extensions: 28237
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 2
length of query: 831
length of database: 516,269
effective HSP length: 70
effective length of query: 761
effective length of database: 367,659
effective search space: 279788499
effective search space used: 279788499
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)