Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002250-TA|BGIBMGA002250-PA|IPR000091|Huntingtin
(831 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 71 1e-11
AB209506-1|BAD92743.1| 1147|Homo sapiens huntingtin variant prot... 71 1e-11
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 71 1e-11
Z49155-1|CAA89025.1| 180|Homo sapiens cL83D3.1 (exons 3-7) prot... 62 8e-09
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 37 0.26
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 36 0.45
U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein. 33 5.5
U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mut... 33 5.5
U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia pro... 33 5.5
U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein. 33 5.5
U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-ki... 33 5.5
AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia m... 33 5.5
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 416 EETDSTDTDLEKCSHDAGFKINIGSVADDD-VPLKYCVRLLASKFLLAGNKGDLIPDRSV 474
E T+ D + + C K +IG DDD PL +CVRLL++ FLL G K L+PDR V
Sbjct: 654 EATEPGDQENKPCR----IKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDV 709
Query: 475 RVSLKASALNCISEVVQVYPQA 496
RVS+KA AL+C+ V ++P++
Sbjct: 710 RVSVKALALSCVGAAVALHPES 731
Score = 62.1 bits (144), Expect = 8e-09
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 62 LFLASHDSAE--VRLVGDEALNRAVVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRI 119
LFL D AE VR+V DE LN+ + + + + L +I R +RAAL R
Sbjct: 133 LFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRF 192
Query: 120 CLGECWLRPGVGKIRNQAQFLFPKLSQIVKETNEIQLIVEALESNLPRLLNALGEYTSDE 179
+RP K R L P L++ K E + E L + +P+++ + G + +D
Sbjct: 193 AELAHLVRP--QKCRPYLVNLLPCLTRTSKRPEE--SVQETLAAAVPKIMASFGNFANDN 248
Query: 180 EISELSKAILLHVETTEASVRRGIATCIAHMCSH 213
EI L KA + +++++ ++RR A +C H
Sbjct: 249 EIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQH 282
Score = 58.8 bits (136), Expect = 7e-08
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 695 EFQHLSDVFLLLEGHCDPQIRGLVRVCIGNYLAAALNASHGDYNRWRNFNSLPKAVGDCM 754
E Q++SD+ ++ H DPQ+RG + G + + L+ S W ++ G+
Sbjct: 748 EEQYVSDILNYID-HGDPQVRGATAILCGTLICSILSRSRFHVGDW--MGTIRTLTGNTF 804
Query: 755 SAGDLVQIILKGLRDEIHSTVNHSLSALTGLAVALSASSDWSLLVDALTSLVHVEANTYW 814
S D + ++ K L+DE T + +A+ ++L +SS L + + ++ + ++YW
Sbjct: 805 SLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSSSYSELGLQLIIDVLTLRNSSYW 864
Query: 815 LCRVNLCKLYERIPYK 830
L R L + I ++
Sbjct: 865 LVRTELLETLAEIDFR 880
>AB209506-1|BAD92743.1| 1147|Homo sapiens huntingtin variant
protein.
Length = 1147
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 416 EETDSTDTDLEKCSHDAGFKINIGSVADDD-VPLKYCVRLLASKFLLAGNKGDLIPDRSV 474
E T+ D + + C K +IG DDD PL +CVRLL++ FLL G K L+PDR V
Sbjct: 50 EATEPGDQENKPCR----IKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDV 105
Query: 475 RVSLKASALNCISEVVQVYPQA 496
RVS+KA AL+C+ V ++P++
Sbjct: 106 RVSVKALALSCVGAAVALHPES 127
Score = 58.8 bits (136), Expect = 7e-08
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 695 EFQHLSDVFLLLEGHCDPQIRGLVRVCIGNYLAAALNASHGDYNRWRNFNSLPKAVGDCM 754
E Q++SD+ ++ H DPQ+RG + G + + L+ S W ++ G+
Sbjct: 144 EEQYVSDILNYID-HGDPQVRGATAILCGTLICSILSRSRFHVGDW--MGTIRTLTGNTF 200
Query: 755 SAGDLVQIILKGLRDEIHSTVNHSLSALTGLAVALSASSDWSLLVDALTSLVHVEANTYW 814
S D + ++ K L+DE T + +A+ ++L +SS L + + ++ + ++YW
Sbjct: 201 SLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSSSYSELGLQLIIDVLTLRNSSYW 260
Query: 815 LCRVNLCKLYERIPYK 830
L R L + I ++
Sbjct: 261 LVRTELLETLAEIDFR 276
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 416 EETDSTDTDLEKCSHDAGFKINIGSVADDD-VPLKYCVRLLASKFLLAGNKGDLIPDRSV 474
E T+ D + + C K +IG DDD PL +CVRLL++ FLL G K L+PDR V
Sbjct: 654 EATEPGDQENKPCR----IKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDV 709
Query: 475 RVSLKASALNCISEVVQVYPQA 496
RVS+KA AL+C+ V ++P++
Sbjct: 710 RVSVKALALSCVGAAVALHPES 731
Score = 62.1 bits (144), Expect = 8e-09
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 62 LFLASHDSAE--VRLVGDEALNRAVVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRI 119
LFL D AE VR+V DE LN+ + + + + L +I R +RAAL R
Sbjct: 133 LFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRF 192
Query: 120 CLGECWLRPGVGKIRNQAQFLFPKLSQIVKETNEIQLIVEALESNLPRLLNALGEYTSDE 179
+RP K R L P L++ K E + E L + +P+++ + G + +D
Sbjct: 193 AELAHLVRP--QKCRPYLVNLLPCLTRTSKRPEE--SVQETLAAAVPKIMASFGNFANDN 248
Query: 180 EISELSKAILLHVETTEASVRRGIATCIAHMCSH 213
EI L KA + +++++ ++RR A +C H
Sbjct: 249 EIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQH 282
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 695 EFQHLSDVFLLLEGHCDPQIRGLVRVCIGNYLAAALNASHGDYNRWRNFNSLPKAVGDCM 754
E Q++SD+ ++ H DPQ+RG + G + + L+ S W ++ G+
Sbjct: 748 EEQYVSDILNYID-HGDPQVRGATAILCGTLICSILSRSRFHVGDW--MGTIRTLTGNTF 804
Query: 755 SAGDLVQIILKGLRDEIHSTVNHSLSALTGLAVALSASSDWSLLVDALTSLVHVEANTYW 814
S D + ++ K L+DE T + +A+ ++L +SS L + + ++ + ++YW
Sbjct: 805 SLADCIPLLRKTLKDESSVTSKLACTAVRNCVMSLCSSSYSELGLQLIIDVLTLRNSSYW 864
Query: 815 LCRVNLCKLYERIPYK 830
L R L + I ++
Sbjct: 865 LVRTELLETLAEIDFR 880
>Z49155-1|CAA89025.1| 180|Homo sapiens cL83D3.1 (exons 3-7)
protein.
Length = 180
Score = 62.1 bits (144), Expect = 8e-09
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 62 LFLASHDSAE--VRLVGDEALNRAVVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRI 119
LFL D AE VR+V DE LN+ + + + + L +I R +RAAL R
Sbjct: 15 LFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRF 74
Query: 120 CLGECWLRPGVGKIRNQAQFLFPKLSQIVKETNEIQLIVEALESNLPRLLNALGEYTSDE 179
+RP K R L P L++ K E + E L + +P+++ + G + +D
Sbjct: 75 AELAHLVRPQ--KCRPYLVNLLPCLTRTSKRPEES--VQETLAAAVPKIMASFGNFANDN 130
Query: 180 EISELSKAILLHVETTEASVRRGIATCIAHMCSH 213
EI L KA + +++++ ++RR A +C H
Sbjct: 131 EIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQH 164
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 37.1 bits (82), Expect = 0.26
Identities = 39/193 (20%), Positives = 67/193 (34%), Gaps = 3/193 (1%)
Query: 504 DADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKKDI 563
D+D+ N S S+ +DS+ + ++ + DS S S + + S +
Sbjct: 106 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSS 165
Query: 564 KSLEKSTDSGEKS-SKDAPSIDSKHKTDLMGSA-MTDSTNPXXXXXXXXXXXXXXXXXDQ 621
KS S+DS KS S D+ S DS +D S+ ++S++
Sbjct: 166 KSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSS 225
Query: 622 TSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLE-RKTDRTKRALKRTDEVQSA 680
S D S ++ N D + + + + +D S+
Sbjct: 226 DSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 285
Query: 681 DVEGLVDSKDEKD 693
D DS D D
Sbjct: 286 DSSNSSDSSDSSD 298
Score = 36.7 bits (81), Expect = 0.34
Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 1/192 (0%)
Query: 502 DKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKK 561
D + N S SS+ +DS+ + ++ N DS + + S + S S
Sbjct: 226 DSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSS 285
Query: 562 DIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXXDQ 621
D + S+DS + SS + S DS +D S+ + +N +
Sbjct: 286 DSSNSSDSSDSSD-SSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSDSSDSSNS 344
Query: 622 TSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSAD 681
+ +S + D+ + + R+D S+D
Sbjct: 345 SDSSDSSDSSDSDSSNSSDSSNSSDSSDSCNSSDSSDSSDSSDGSDSDSSNRSDSSNSSD 404
Query: 682 VEGLVDSKDEKD 693
DS + D
Sbjct: 405 SSDSSDSSNSSD 416
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 502 DKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKK 561
D +D+ N S SS+ +DS+ + + + + S + S S N S S
Sbjct: 175 DSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSS 234
Query: 562 DIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDSTN 601
+ S+DS + S D+ + + +D S +DS++
Sbjct: 235 NSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSD 274
Score = 32.7 bits (71), Expect = 5.5
Identities = 39/182 (21%), Positives = 60/182 (32%), Gaps = 8/182 (4%)
Query: 513 SGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKKDIKSLEKSTDS 572
S SS+ +DSN + ++ + +DS S + S S D S+DS
Sbjct: 501 SNSSDSSDSNSSDSSDSSXSSDSSDSSDSSDS-SDSSDSSDSSDSSDSSDSSDSSNSSDS 559
Query: 573 GEKSSKDAPSIDSKHKTDLMGSA-MTDSTNPXXXXXXXXXXXXXXXXXDQTSGYPMXXXX 631
G SS + S DS +D S+ +DS+N S
Sbjct: 560 G-NSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSD 618
Query: 632 XXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSADVEGLVDSKDE 691
ES+ + D+ D +D + +D S+D DS D
Sbjct: 619 SSDSSDSSDSSDSSDSSESSNSSDS-SDSSDSSDSS----DSSDSSDSSDSSNRSDSSDS 673
Query: 692 KD 693
D
Sbjct: 674 SD 675
Score = 32.3 bits (70), Expect = 7.3
Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 6/202 (2%)
Query: 502 DKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSL-SQELNRSIEGHSICK 560
D + ++ S SS+ +DS+ + + + + S +DS S + + S + C
Sbjct: 316 DSSNSSDSNDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSCN 375
Query: 561 KDIKSLEKSTDSGEKSSKDAPS-IDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXX 619
S S+DS + S D+ + DS + +D S+ + +++
Sbjct: 376 SSDSS--DSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSS 433
Query: 620 DQTSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQS 679
D ++ ES+ + DN + + + + +D S
Sbjct: 434 DSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD--SSNSSDSSDSSDSSNS 491
Query: 680 ADVEGLVDSKDEKDFEFQHLSD 701
+D DS + D + SD
Sbjct: 492 SDSSNSSDSSNSSDSSDSNSSD 513
Score = 31.9 bits (69), Expect = 9.6
Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 5/192 (2%)
Query: 502 DKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKK 561
D D+ + +N + G + N DN + DS +DS S + + S +
Sbjct: 52 DSDSTSDTNNSDSNGNGNNGNDDNDKS---DSGKGKSDS-SDSDSSDSSNSSDSSDSSDS 107
Query: 562 DIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXXDQ 621
D S+DS S + S DS S +DS++
Sbjct: 108 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKS 167
Query: 622 TSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSAD 681
S + ++N N D +D + + +D S+D
Sbjct: 168 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSS-SSSDSSNSSD 226
Query: 682 VEGLVDSKDEKD 693
DS + +
Sbjct: 227 SSDSSDSSNSSE 238
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 36.3 bits (80), Expect = 0.45
Identities = 39/191 (20%), Positives = 65/191 (34%), Gaps = 8/191 (4%)
Query: 504 DADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKKDI 563
D+D+ N S S+ +DS+ + ++ + DS S S + + S +
Sbjct: 568 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSS 627
Query: 564 KSLEKSTDSGEKS-SKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXXDQT 622
KS S+DS KS S D+ S DS +D +DS+N
Sbjct: 628 KSESDSSDSDSKSDSSDSNSSDSSDNSD-----SSDSSNSSNSSDSSDSSDSSDSSSSSD 682
Query: 623 SGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSADV 682
S +S+ + D+ D +D + +D S+D
Sbjct: 683 SSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDS--DSSDSSDSSNSNSSDSDSSNSSDS 740
Query: 683 EGLVDSKDEKD 693
DS D +
Sbjct: 741 SDSSDSSDSSN 751
Score = 35.9 bits (79), Expect = 0.59
Identities = 36/192 (18%), Positives = 59/192 (30%), Gaps = 5/192 (2%)
Query: 502 DKDADAKIHNISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKK 561
D D+ + +N + G + N DN + DS +DS S + + S +
Sbjct: 514 DSDSTSDTNNSDSNGNGNNGNDDNDKS---DSGKGKSDS-SDSDSSDSSNSSDSSDSSDS 569
Query: 562 DIKSLEKSTDSGEKSSKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXXDQ 621
D S+DS S + S DS S +DS++
Sbjct: 570 DSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKS 629
Query: 622 TSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSAD 681
S + ++N N D +D + + +D S+D
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSS-SSSDSSSSSD 688
Query: 682 VEGLVDSKDEKD 693
DS D D
Sbjct: 689 SSNSSDSSDSSD 700
Score = 33.5 bits (73), Expect = 3.1
Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 7/184 (3%)
Query: 511 NISGSSEGTDSNQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSICKKDIKSLEKST 570
N S SS+ +DS+ D+ + R+ S + S N S S D S+
Sbjct: 837 NSSDSSDSSDSS-DSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSS 895
Query: 571 DSGEKS-SKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXXXDQTSGYPMXX 629
DS + S S D+ S DS + +D S+ + ++ D +
Sbjct: 896 DSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSN 955
Query: 630 XXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQSADVEGLVDSK 689
+ S +N + D +D + + +D S+D DS
Sbjct: 956 SSDSSNSGDSS----NSSDSSDSNSSDSSDSSNSSDSSDSS-DSSDSSDSSDSSNSSDSS 1010
Query: 690 DEKD 693
D D
Sbjct: 1011 DSSD 1014
Score = 32.3 bits (70), Expect = 7.3
Identities = 37/203 (18%), Positives = 68/203 (33%), Gaps = 5/203 (2%)
Query: 502 DKDADAKIHNISGSSEGTDS--NQDNINEYILERNVCYQDSLTDSLSQELNRSIEGHSIC 559
D + ++ S SS+ +DS + D+ N + DS + + S N S S
Sbjct: 778 DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSN 837
Query: 560 KKDIKSLEKSTDSGEK-SSKDAPSIDSKHKTDLMGSAMTDSTNPXXXXXXXXXXXXXXXX 618
D S+DS + SS + S +S +D S+ + ++
Sbjct: 838 SSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDS 897
Query: 619 XDQTSGYPMXXXXXXXXXXXXXXMKFDHFGESTTNLDNLKDLERKTDRTKRALKRTDEVQ 678
D ++ ES+ + DN + + + + +D
Sbjct: 898 SDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD--SSNSSDSSDSSDSSN 955
Query: 679 SADVEGLVDSKDEKDFEFQHLSD 701
S+D DS + D + SD
Sbjct: 956 SSDSSNSGDSSNSSDSSDSNSSD 978
>U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 2531 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 2589
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 2590 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 2620
>U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mutated
protein.
Length = 1708
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 1183 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 1241
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 1242 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 1272
>U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia protein.
Length = 3056
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 2531 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 2589
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 2590 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 2620
>U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 2531 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 2589
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 2590 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 2620
>U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-kinase
homolog protein.
Length = 1708
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 1183 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 1241
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 1242 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 1272
>AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia
mutated (includes complementation groups A, C and D)
protein.
Length = 2756
Score = 32.7 bits (71), Expect = 5.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 84 VVGGFAFHSHKTNIILQNQIDHKRNARWIRAALSRICLGECWLRPGVGKIRNQAQFLFPK 143
++GG FH N+I + +DH + +I AL+ E +P V + R++ PK
Sbjct: 2531 MMGGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVAR-RSRITKNVPK 2589
Query: 144 LSQIVKE--TNEIQLIVEALESNLPRLLNAL 172
S + E T I+ + S P+++ ++
Sbjct: 2590 QSSQLDEDRTEAANRIICTIRSRRPQMVRSV 2620
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,919,455
Number of Sequences: 224733
Number of extensions: 3796572
Number of successful extensions: 16486
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 16344
Number of HSP's gapped (non-prelim): 105
length of query: 831
length of database: 73,234,838
effective HSP length: 96
effective length of query: 735
effective length of database: 51,660,470
effective search space: 37970445450
effective search space used: 37970445450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 69 (31.9 bits)
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