GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002247-TA|BGIBMGA002247-PA|IPR001650|Helicase,
C-terminal, IPR000330|SNF2-related
         (925 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    29   0.42 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    29   0.42 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   3.0  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   9.1  

>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 29.5 bits (63), Expect = 0.42
 Identities = 18/58 (31%), Positives = 25/58 (43%)

Query: 843 VMDCCLEKKIYDRQINKQGMADRVVDECNPDAVLSMKEITNLCFDNDEKDDESSFNVS 900
           ++  C EK   D+    +G A     EC  + +L+   I N   D DEK   S F  S
Sbjct: 48  IVSSCFEKFPIDKDAADKGAASMPKTECMSECILNSTGIYNRRGDVDEKKLNSVFTDS 105


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 29.5 bits (63), Expect = 0.42
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 470 SNIPQNSPTAQYPGYGYPQNAAPYPESENPGSTYPSQYPNFPQHLETKPPLGSASSGSPI 529
           S +P + P+   P    P   AP  +S     T  S  P  P+     PP G  SS SP+
Sbjct: 45  SKMPTSYPSLPAPIV--PSPGAPIQQSRPQAVTVRSSAPMLPKG--GLPPKGVPSSASPV 100

Query: 530 TSWPITELKTE 540
              P + L T+
Sbjct: 101 YMSPASSLMTK 111



 Score = 25.0 bits (52), Expect = 9.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 419 NQYENINSNFP-GYANNTLENAAPDPSVPNQQLVKNE 454
           +Q  N  S+F  G A      A+P PS PNQQ++  E
Sbjct: 160 SQLMNQTSSFHRGGAAIRTAPASPFPSAPNQQIIYKE 196


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 419 NQYENINSNFP-GYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQN 475
           +Q  N  S+F  G A      A+P PS PNQQ++  E   T N     + +   +P++
Sbjct: 165 SQLMNQTSSFHRGGAAIRTAPASPFPSAPNQQIIYKE--QTANLQVQKVPAFQAMPES 220


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 566 LDTKKIVKDEKKPPLN----AAVV-PTQLKPEPVKRNENEQKTDATKSDASESEED 616
           L  KKI   E K P +    A +  P   KPE   + E+    DATK D  + E D
Sbjct: 200 LPPKKIKDPEAKKPEDWDDRATIADPDDTKPEDWDKPEHIPDPDATKPDDWDDEMD 255


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,944
Number of Sequences: 2123
Number of extensions: 34852
Number of successful extensions: 109
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 106
Number of HSP's gapped (non-prelim): 6
length of query: 925
length of database: 516,269
effective HSP length: 70
effective length of query: 855
effective length of database: 367,659
effective search space: 314348445
effective search space used: 314348445
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)