Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002247-TA|BGIBMGA002247-PA|IPR001650|Helicase,
C-terminal, IPR000330|SNF2-related
(925 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 27 0.92
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 27 0.92
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.92
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 2.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 2.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 2.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 2.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 2.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 3.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 25 3.7
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 24 4.9
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 24 4.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 8.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 8.6
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.92
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 416 AQYNQYEN-INSNFPGYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQ 474
+ YN Y N N+N+ NN + + + +Q+ P NFP + ++ +
Sbjct: 92 SNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
Query: 475 NSPTAQYPGYGYP 487
P +Y G P
Sbjct: 152 QIPRFRYIGPSTP 164
Score = 24.6 bits (51), Expect = 3.7
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 417 QYNQYENINSNFPGYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQNS 476
+Y+ Y N N+N+ NN N ++ P P + N P S
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVY-YGNFPPRPMGPWIS 148
Query: 477 PTAQYPGYGYPQNAAPYPESENPGS 501
Q P + Y + P+P P +
Sbjct: 149 MQEQIPRFRYIGPSTPFPRFIPPNA 173
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.92
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 416 AQYNQYEN-INSNFPGYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQ 474
+ YN Y N N+N+ NN + + + +Q+ P NFP + ++ +
Sbjct: 92 SNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
Query: 475 NSPTAQYPGYGYP 487
P +Y G P
Sbjct: 152 QIPRFRYIGPSTP 164
Score = 24.6 bits (51), Expect = 3.7
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 417 QYNQYENINSNFPGYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQNS 476
+Y+ Y N N+N+ NN N ++ P P + N P S
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVY-YGNFPPRPMGPWIS 148
Query: 477 PTAQYPGYGYPQNAAPYPESENPGS 501
Q P + Y + P+P P +
Sbjct: 149 MQEQIPRFRYIGPSTPFPRFIPPNA 173
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.6 bits (56), Expect = 0.92
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 417 QYNQYENINSNFPGYAN-NTLENAAPDPSVPNQQLVKNEPATTP-NFPTNNIKSESNIPQ 474
+Y+ Y N N+N+ Y N N N N ++ P P N S P
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRSMEPW 382
Query: 475 NSPTAQYPGYGYPQNAAPYPESENPGS--TYPSQYPNF-PQH 513
S Q P + + + P+P P + P P F P H
Sbjct: 383 ISMQEQIPRFRHIGPSTPFPRFIPPNAYRFRPPLNPRFGPTH 424
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 225 YWCMVDFVRPNYLGSKTEFCNMFERPIQN 253
Y +++FV NY+G K N+ RP +N
Sbjct: 375 YASLLEFVCVNYVGRKRPMHNVVYRPGEN 403
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 225 YWCMVDFVRPNYLGSKTEFCNMFERPIQN 253
Y +++FV NY+G K N+ RP +N
Sbjct: 344 YASLLEFVCVNYVGRKRPMHNVVYRPGEN 372
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 225 YWCMVDFVRPNYLGSKTEFCNMFERPIQN 253
Y +++FV NY+G K N+ RP +N
Sbjct: 395 YASLLEFVCVNYVGRKRPMHNVVYRPGEN 423
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 225 YWCMVDFVRPNYLGSKTEFCNMFERPIQN 253
Y +++FV NY+G K N+ RP +N
Sbjct: 344 YASLLEFVCVNYVGRKRPMHNVVYRPGEN 372
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.0 bits (52), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 725 DRLLLFSQSLFTLNLIEDFLERNYIPGTNCPWERNT 760
D L FSQ L L DF E+ ++P T ++N+
Sbjct: 94 DERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNS 129
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 3.7
Identities = 25/97 (25%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 418 YNQYENINSNFPGYANNTLENAAPDPSVPNQQLVKNEPATTPNFPTNNIKSESNIPQNSP 477
Y+ Y N N+N+ Y N +P V P NFP + +I + P
Sbjct: 91 YSNYNNYNNNYNNYNKKLYYNINYIEQIPVPVPV---PVYCGNFPPRPMGPWISIQEQIP 147
Query: 478 TAQYPGYGYPQNAAPYPESENPGSTYPSQYPNF-PQH 513
++ G P P S N P P F P H
Sbjct: 148 RFRHIG---PSTPFPRFISPNAYRFRPPLNPRFGPTH 181
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 482 PGYGYPQNAAPYPESENPGSTYPSQY 507
PG YP A P S +P +PSQY
Sbjct: 302 PGV-YPSTAGFLPPSYHPHQHHPSQY 326
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 24.2 bits (50), Expect = 4.9
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 803 LVGANRVIVFDASWNPCHDTQAVCRVYRYGQRKPCFVYRFVMDCCLEK-KIYDRQINK 859
L R + D H+ C V + C V R +DC LEK K D ++ K
Sbjct: 76 LESGTRELTPDDFTEDVHEIIEQC-VSKAADEDECMVARKYIDCALEKMKFLDDELEK 132
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 24.2 bits (50), Expect = 4.9
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 803 LVGANRVIVFDASWNPCHDTQAVCRVYRYGQRKPCFVYRFVMDCCLEK-KIYDRQINK 859
L R + D H+ C V + C V R +DC LEK K D ++ K
Sbjct: 76 LESGTRELTPDDFTEDVHEIIEQC-VSKAADEDECMVARKYIDCALEKMKFLDDELEK 132
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 8.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 39 IYVLNDSHKTLQMRAKVVKDWTTSGGVL 66
I ++ D K+ ++ AKV DW + V+
Sbjct: 499 IKIITDQLKSEELNAKVTNDWKFAAMVI 526
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 8.6
Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 510 FPQHLETKPPLGSAS-SGSPITSWPITELKTEVDKFKAEEMKAEVKSESDGEVKIADLDT 568
+ H +K L A+ GS + E+K EV+ + +++K E+ + + ++ +T
Sbjct: 264 YEMHQISKKKLSPATPKGSKCSMITTPEIKKEVEDMEYDDIKTELSTGMNDDI---PPET 320
Query: 569 KKIVKDEKKPPLNA 582
++ +++KK L++
Sbjct: 321 EEEEENDKKLDLDS 334
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,343
Number of Sequences: 429
Number of extensions: 11618
Number of successful extensions: 37
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 20
length of query: 925
length of database: 140,377
effective HSP length: 64
effective length of query: 861
effective length of database: 112,921
effective search space: 97224981
effective search space used: 97224981
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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