Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002243-TA|BGIBMGA002243-PA|IPR001977|Dephospho-CoA
kinase
(203 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0286 - 14657682-14657803,14658194-14658419,14659894-146598... 165 2e-41
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 41 8e-04
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 32 0.28
06_01_0859 - 6506029-6506133,6506255-6506319,6506461-6506539,650... 31 0.65
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 30 1.1
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 2.0
01_06_1236 + 35613123-35613816,35615809-35615952,35616032-356161... 29 2.0
09_04_0658 + 19275129-19275363,19275453-19275544,19276440-192765... 29 2.6
10_05_0004 + 7717748-7717798,7718107-7718317,7719424-7720079,772... 28 4.6
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977... 27 8.0
05_03_0452 + 14221741-14222382 27 8.0
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410 27 8.0
03_05_0871 + 28396964-28399843 27 8.0
>01_03_0286 -
14657682-14657803,14658194-14658419,14659894-14659899,
14661218-14661298,14662498-14662888,14663207-14663352,
14665455-14665562
Length = 359
Score = 165 bits (402), Expect = 2e-41
Identities = 85/203 (41%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 1 MFIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFP 60
M +VGLTGG+A+GKST+ ++FK GI V+DAD VAR V++ GT W ++ + FG+ VL
Sbjct: 1 MRLVGLTGGIASGKSTISNLFKASGIPVVDADIVARNVVQKGTGGWKKIVEAFGNDVLLE 60
Query: 61 DGRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHTYIVMEVPLLFET 120
+G ++R +LG+IVF D EKR+ LN + P I S + + G IV+++PLLFET
Sbjct: 61 NGEIDRARLGQIVFSDPEKRQVLNRLLAPHISSGIFWEILKLWIKGCKVIVLDIPLLFET 120
Query: 121 GKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNSG 180
K+ + H +I V + Q+ERL R+ SE AR RIN+Q+ L K +++ VIDNSG
Sbjct: 121 -KMDQWTHPVIVVWVNEATQIERLMSRDGCSEEQARNRINAQLALDWKKSQADIVIDNSG 179
Query: 181 DLTNTRNQTESIIKVLRKSKFTW 203
L T+ + + +++ + TW
Sbjct: 180 TLDETKEKFQEVLRNV-SEPLTW 201
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 40.7 bits (91), Expect = 8e-04
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 4 VGLTGGLATGKSTVLS-IFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFPDG 62
V ++G A+GK T I +++G+ I ++ R + GT+ + K+Y +G+L PD
Sbjct: 92 VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQ 151
Query: 63 RVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHTYIVMEVPLLFETGK 122
V + + + D+ +R L +PR A + S +IV+E+ L + K
Sbjct: 152 VVTDMVVSRLSQPDVRERGWL-LDGYPR-SYAQAQSLESMKIRPDIFIVLEIELYNQFIK 209
Query: 123 LLTFMHKIIT 132
L +H+ IT
Sbjct: 210 FL--VHENIT 217
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 148 NDFSEIVARKRINSQMPLHEKVAKSHFVIDNSGDLTNTRNQTESII 193
N+ S++V++ ++N +P+ E D+SG+ + QTE+II
Sbjct: 368 NNVSQLVSQSQLNKLLPIDESRLDDKLTKDSSGNRDTSNLQTENII 413
>06_01_0859 -
6506029-6506133,6506255-6506319,6506461-6506539,
6506764-6506893,6507231-6507396,6507515-6507569,
6507693-6507739,6508416-6508614
Length = 281
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 11 ATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEV 49
A G +V IFKEH A D A K ++ G WL+V
Sbjct: 132 AVGMPSVAQIFKEHSEAFF-RDNEAMKYMKKGLSVWLDV 169
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 2 FIVGLTGGLATGKSTVLSI----FKEHGIAVIDADEVARKVLE 40
F++G++GG A+GK+TV + +H + +++ D R + E
Sbjct: 68 FVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTE 110
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 15 STVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLF 59
ST++S F+E + DAD ++E KA L+++ + + LF
Sbjct: 1555 STLISKFEEAQATISDADTTVNALVEANEKAKLQIQNFKENEALF 1599
>01_06_1236 +
35613123-35613816,35615809-35615952,35616032-35616184,
35616572-35616687,35616800-35616967,35617647-35617707,
35617772-35617824,35618278-35618508,35618600-35618749
Length = 589
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 30 DADEVARKVLEPGTKAWLEVKQYFGHGVLFPDGRVNRLKLGEIVFDDIEKRRKLN 84
+A ++ R++LEP K L KQ H L + + LG+IV +++ ++N
Sbjct: 307 NAKDLVRRMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDIVKSRLKQFSRMN 361
>09_04_0658 +
19275129-19275363,19275453-19275544,19276440-19276509,
19276617-19276735,19277026-19277122,19277229-19277308,
19277443-19277637,19277727-19277810,19277931-19277991,
19278682-19278742,19279162-19279255,19279357-19279429,
19279834-19279916,19280008-19280154
Length = 496
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 2 FIVGLTGGLATGKSTVLSI----FKEHGIAVIDADEVAR 36
F++G++GG A+GK+TV + +H + +++ D R
Sbjct: 76 FVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYR 114
>10_05_0004 +
7717748-7717798,7718107-7718317,7719424-7720079,
7721296-7721469,7721562-7721678,7722820-7722999,
7723244-7723290,7724068-7724401
Length = 589
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 117 LFETGKLLTFMHKIITVVCEDHQQLERLY-KRNDFSEIVARKRINSQMPLHEKVAKS 172
L E G+++ + +TV+CED QL+++ +R F ++ K + L + KS
Sbjct: 468 LVERGQIVDTLQGEMTVICEDVSQLKQIVDERLSFCKLQRSKMSSLSSSLQSSLHKS 524
>08_01_1083 +
11096520-11096664,11097543-11097592,11097682-11097754,
11099122-11099201,11099354-11099505,11100653-11100812,
11100886-11100933,11101118-11101198,11101517-11101597
Length = 289
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 117 LFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQM 163
LF++ + + I V E QLE+ K N+ E +AR++IN+ +
Sbjct: 141 LFDSEGQSSQSNSIKQKVAEIAAQLEQYQKANEIFEAIARQQINNNL 187
>05_03_0452 + 14221741-14222382
Length = 213
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 13 GKSTVLSIFKEHGIAVIDADEVARKVLEPG 42
G TVL +F+ H + VI A +VA V PG
Sbjct: 173 GTVTVLGVFRRHAV-VITACDVALSVRRPG 201
>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
Length = 1279
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 4 VGLTGGLATGKSTVLSIFK 22
VGL GG +GKSTV+S+ +
Sbjct: 376 VGLVGGSGSGKSTVISLLQ 394
>03_05_0871 + 28396964-28399843
Length = 959
Score = 27.5 bits (58), Expect = 8.0
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 3 IVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFPDG 62
+VG+ G GK+T+ S+ A+ R GT + V+ YF P G
Sbjct: 187 VVGIVGMGGVGKTTLASLVYNKVSAIQTGGTSLRPDSPKGTSSRSSVEMYFDACAWVPVG 246
Query: 63 RVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIR 97
+ N LG + + +LN+ ++AM R
Sbjct: 247 Q-NADALGLLKITSAQIGVELNSTQVAAAKNAMFR 280
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.139 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,402,414
Number of Sequences: 37544
Number of extensions: 205758
Number of successful extensions: 607
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 597
Number of HSP's gapped (non-prelim): 15
length of query: 203
length of database: 14,793,348
effective HSP length: 79
effective length of query: 124
effective length of database: 11,827,372
effective search space: 1466594128
effective search space used: 1466594128
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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