GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002243-TA|BGIBMGA002243-PA|IPR001977|Dephospho-CoA
kinase
         (203 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094946-1|AAM11299.1|  236|Drosophila melanogaster RH63365p pro...   222   2e-58
AE014297-551|AAF54069.1|  236|Drosophila melanogaster CG1939-PA ...   219   2e-57
BT024307-1|ABC86369.1|  529|Drosophila melanogaster IP11908p pro...   124   9e-29
AE014296-997|AAF50749.2|  518|Drosophila melanogaster CG10575-PA...   124   9e-29
BT015244-1|AAT94473.1|  216|Drosophila melanogaster LP23885p pro...    38   0.007
AE014297-1233|AAN13494.1|  216|Drosophila melanogaster CG6612-PB...    38   0.007
AE014297-1232|AAF54578.1|  216|Drosophila melanogaster CG6612-PA...    38   0.007
AB050622-1|BAB44152.1|  216|Drosophila melanogaster adenylate ki...    38   0.007
U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.       30   1.9  
AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-P...    30   1.9  
AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-P...    30   1.9  
BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p pro...    30   2.6  
AY119583-1|AAM50237.1|  260|Drosophila melanogaster LD13909p pro...    29   3.4  
AE014297-3519|AAF56274.1|  260|Drosophila melanogaster CG6364-PA...    29   3.4  

>AY094946-1|AAM11299.1|  236|Drosophila melanogaster RH63365p
           protein.
          Length = 236

 Score =  222 bits (543), Expect = 2e-58
 Identities = 101/203 (49%), Positives = 139/203 (68%)

Query: 1   MFIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFP 60
           MFIV +TGG+ATGKST+  +F+  GI VIDAD++AR+++EPG   W ++++ FG  VL P
Sbjct: 1   MFIVAVTGGIATGKSTISKVFERQGIPVIDADKIAREIVEPGQPCWRQIREVFGDEVLLP 60

Query: 61  DGRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHTYIVMEVPLLFET 120
              +NR  LG+++F+D E RRKLN ITHP I   +         TGH +IV+++PLLFET
Sbjct: 61  SKEINRAVLGKMIFEDKELRRKLNKITHPTIHRKIFWQVCKLLVTGHAWIVLDLPLLFET 120

Query: 121 GKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNSG 180
           G L+ F+HKI+ V C+  +QLERL  RN+ SE  AR R++SQMPL +K  KSHFVIDN+G
Sbjct: 121 GVLMDFIHKIVCVTCDSDKQLERLIARNELSESEARHRVDSQMPLDKKCEKSHFVIDNNG 180

Query: 181 DLTNTRNQTESIIKVLRKSKFTW 203
            +    +   SI  ++R SK  W
Sbjct: 181 SVEEAESSAMSIYNLMRDSKQHW 203


>AE014297-551|AAF54069.1|  236|Drosophila melanogaster CG1939-PA
           protein.
          Length = 236

 Score =  219 bits (536), Expect = 2e-57
 Identities = 100/203 (49%), Positives = 138/203 (67%)

Query: 1   MFIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFP 60
           MFIV +TGG+ATGKST+  +F+  GI VIDAD++AR+++EPG   W ++++ FG  VL P
Sbjct: 1   MFIVAVTGGIATGKSTISKVFERQGIPVIDADKIAREIVEPGQPCWRQIREVFGDEVLLP 60

Query: 61  DGRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHTYIVMEVPLLFET 120
              +NR  LG+++F+D E R KLN ITHP I   +         TGH +IV+++PLLFET
Sbjct: 61  SKEINRAVLGKMIFEDKELRGKLNKITHPTIHRKIFWQVCKLLVTGHAWIVLDLPLLFET 120

Query: 121 GKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNSG 180
           G L+ F+HKI+ V C+  +QLERL  RN+ SE  AR R++SQMPL +K  KSHFVIDN+G
Sbjct: 121 GVLMDFIHKIVCVTCDSDKQLERLIARNELSESEARHRVDSQMPLDKKCEKSHFVIDNNG 180

Query: 181 DLTNTRNQTESIIKVLRKSKFTW 203
            +    +   SI  ++R SK  W
Sbjct: 181 SVEEAESSAMSIYNLMRDSKQHW 203


>BT024307-1|ABC86369.1|  529|Drosophila melanogaster IP11908p
           protein.
          Length = 529

 Score =  124 bits (299), Expect = 9e-29
 Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 2   FIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFPD 61
           +I+GLTGG+A+GKS +       G  VID D+VA  V EPG   +  + Q+FG G++  D
Sbjct: 323 YIIGLTGGIASGKSKMGERLANMGAHVIDCDKVAHDVYEPGQLCYTRIVQHFGQGIVSDD 382

Query: 62  GRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHT--YIVMEVPLLFE 119
           GR++R KLG +VF D ++ + LN I  P + + + R   +          +V+E  +L  
Sbjct: 383 GRIDRSKLGPLVFADPKQLQALNGIVWPELIAEVNRRLDALRSQADVPRVVVLEAAVLLR 442

Query: 120 TGKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNS 179
            G   T  H++ +++    + + R+ +RN  SE+ A+KR+ SQ+P  E VAKSH +  + 
Sbjct: 443 AG-WETNCHEVWSMIVPPDEAVRRIIERNKLSEVEAQKRLASQVPNSEIVAKSHVIFSSQ 501

Query: 180 GDLTNTRNQTESIIKVLRK 198
            D   T+ Q E   K+L K
Sbjct: 502 WDHEFTQKQAERAWKMLTK 520


>AE014296-997|AAF50749.2|  518|Drosophila melanogaster CG10575-PA
           protein.
          Length = 518

 Score =  124 bits (299), Expect = 9e-29
 Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 2   FIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFPD 61
           +I+GLTGG+A+GKS +       G  VID D+VA  V EPG   +  + Q+FG G++  D
Sbjct: 312 YIIGLTGGIASGKSKMGERLANMGAHVIDCDKVAHDVYEPGQLCYTRIVQHFGQGIVSDD 371

Query: 62  GRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHT--YIVMEVPLLFE 119
           GR++R KLG +VF D ++ + LN I  P + + + R   +          +V+E  +L  
Sbjct: 372 GRIDRSKLGPLVFADPKQLQALNGIVWPELIAEVNRRLDALRSQADVPRVVVLEAAVLLR 431

Query: 120 TGKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNS 179
            G   T  H++ +++    + + R+ +RN  SE+ A+KR+ SQ+P  E VAKSH +  + 
Sbjct: 432 AG-WETNCHEVWSMIVPPDEAVRRIIERNKLSEVEAQKRLASQVPNSEIVAKSHVIFSSQ 490

Query: 180 GDLTNTRNQTESIIKVLRK 198
            D   T+ Q E   K+L K
Sbjct: 491 WDHEFTQKQAERAWKMLTK 509


>BT015244-1|AAT94473.1|  216|Drosophila melanogaster LP23885p
          protein.
          Length = 216

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 1  MFIVGLTGGLATGKSTVLSIF-KEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLF 59
          +F   + G   +GK T+  +  K HG   I   ++ R+ +   T+   + KQY   G L 
Sbjct: 5  IFRAVIIGAPGSGKGTISELICKNHGCVHISTGDILRQNIIKNTELGKKAKQYIAEGKLV 64

Query: 60 PDGRVNRLKLGEI 72
          PD  V +  L  I
Sbjct: 65 PDAIVTKTMLARI 77


>AE014297-1233|AAN13494.1|  216|Drosophila melanogaster CG6612-PB,
          isoform B protein.
          Length = 216

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 1  MFIVGLTGGLATGKSTVLSIF-KEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLF 59
          +F   + G   +GK T+  +  K HG   I   ++ R+ +   T+   + KQY   G L 
Sbjct: 5  IFRAVIIGAPGSGKGTISELICKNHGCVHISTGDILRQNIIKNTELGKKAKQYIAEGKLV 64

Query: 60 PDGRVNRLKLGEI 72
          PD  V +  L  I
Sbjct: 65 PDAIVTKTMLARI 77


>AE014297-1232|AAF54578.1|  216|Drosophila melanogaster CG6612-PA,
          isoform A protein.
          Length = 216

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 1  MFIVGLTGGLATGKSTVLSIF-KEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLF 59
          +F   + G   +GK T+  +  K HG   I   ++ R+ +   T+   + KQY   G L 
Sbjct: 5  IFRAVIIGAPGSGKGTISELICKNHGCVHISTGDILRQNIIKNTELGKKAKQYIAEGKLV 64

Query: 60 PDGRVNRLKLGEI 72
          PD  V +  L  I
Sbjct: 65 PDAIVTKTMLARI 77


>AB050622-1|BAB44152.1|  216|Drosophila melanogaster adenylate
          kinase isozyme 3 protein.
          Length = 216

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 1  MFIVGLTGGLATGKSTVLSIF-KEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLF 59
          +F   + G   +GK T+  +  K HG   I   ++ R+ +   T+   + KQY   G L 
Sbjct: 5  IFRAVIIGAPGSGKGTISELICKNHGCVHISTGDILRQNIIKNTELGKKAKQYIAEGKLV 64

Query: 60 PDGRVNRLKLGEI 72
          PD  V +  L  I
Sbjct: 65 PDAIVTKTMLARI 77


>U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 92  QSAMIRIAFSFFFTGHTYIVMEVPLLFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFS 151
           Q A +R+ F  F TG   I + V  ++  GK +   H II V  E+  +LE +    +F 
Sbjct: 930 QIARVRLFFLAFLTGMPTIELGVNDMWRQGKEVVGRHDIIPVATEEWIRLEAV----EFH 985

Query: 152 EIVARK 157
            +V +K
Sbjct: 986 SVVNQK 991


>AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-PB,
           isoform B protein.
          Length = 1260

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 92  QSAMIRIAFSFFFTGHTYIVMEVPLLFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFS 151
           Q A +R+ F  F TG   I + V  ++  GK +   H II V  E+  +LE +    +F 
Sbjct: 930 QIARVRLFFLAFLTGMPTIELGVNDMWRQGKEVVGRHDIIPVATEEWIRLEAV----EFH 985

Query: 152 EIVARK 157
            +V +K
Sbjct: 986 SVVNQK 991


>AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-PA,
           isoform A protein.
          Length = 1260

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 92  QSAMIRIAFSFFFTGHTYIVMEVPLLFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFS 151
           Q A +R+ F  F TG   I + V  ++  GK +   H II V  E+  +LE +    +F 
Sbjct: 930 QIARVRLFFLAFLTGMPTIELGVNDMWRQGKEVVGRHDIIPVATEEWIRLEAV----EFH 985

Query: 152 EIVARK 157
            +V +K
Sbjct: 986 SVVNQK 991


>BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p
           protein.
          Length = 1262

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/51 (35%), Positives = 26/51 (50%)

Query: 92  QSAMIRIAFSFFFTGHTYIVMEVPLLFETGKLLTFMHKIITVVCEDHQQLE 142
           Q A +R+ F  F TG   I + V  ++  GK +   H II V  E+  +LE
Sbjct: 930 QIARVRLFFLAFLTGMPTIELGVNDMWRQGKEVVGRHDIIPVATEEWIRLE 980


>AY119583-1|AAM50237.1|  260|Drosophila melanogaster LD13909p
          protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 2  FIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVL 39
          F++G+ GG A+GKSTV     E  +   + D   R+V+
Sbjct: 28 FLIGVAGGTASGKSTVCKKIMEQ-LGQAEMDHTQRQVV 64


>AE014297-3519|AAF56274.1|  260|Drosophila melanogaster CG6364-PA
          protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 2  FIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVL 39
          F++G+ GG A+GKSTV     E  +   + D   R+V+
Sbjct: 28 FLIGVAGGTASGKSTVCKKIMEQ-LGQAEMDHTQRQVV 64


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.139    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,041
Number of Sequences: 52641
Number of extensions: 345675
Number of successful extensions: 1089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1075
Number of HSP's gapped (non-prelim): 14
length of query: 203
length of database: 24,830,863
effective HSP length: 81
effective length of query: 122
effective length of database: 20,566,942
effective search space: 2509166924
effective search space used: 2509166924
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)