GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002242-TA|BGIBMGA002242-PA|undefined
         (105 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.49 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    20   4.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   4.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   6.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 0.49
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 1/20 (5%)

Query: 48   GYYSIQ-YNREWGWYTAGAG 66
            GY+ I  Y   W WY  G G
Sbjct: 1396 GYFKIVCYFTNWAWYRKGLG 1415



 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 59  GWYTAGAGLLAYF 71
           G+YT   G LAYF
Sbjct: 445 GFYTQNPGFLAYF 457



 Score = 21.4 bits (43), Expect = 2.0
 Identities = 7/18 (38%), Positives = 8/18 (44%)

Query: 49   YYSIQYNREWGWYTAGAG 66
            Y  + Y   W WY  G G
Sbjct: 2321 YKVVCYFTNWAWYRQGDG 2338



 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 59   GWYTAGAGLLAYF 71
            G YT  AG LAY+
Sbjct: 1668 GEYTRAAGFLAYY 1680



 Score = 21.0 bits (42), Expect = 2.6
 Identities = 6/13 (46%), Positives = 6/13 (46%)

Query: 54   YNREWGWYTAGAG 66
            Y   W WY  G G
Sbjct: 1828 YFTNWAWYRQGVG 1840



 Score = 19.8 bits (39), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 57  EWGWYTAGAGLLAYF 71
           E G YT   G+LAY+
Sbjct: 893 EAGEYTKQPGMLAYY 907


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 82  YPLSLALMEYCAYRLFHIHI 101
           +PLSL +  Y + +  H H+
Sbjct: 39  FPLSLGMSPYASSQHHHHHL 58


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 6/32 (18%)

Query: 70  YFVAPPSGLRVMYPLSLALMEYCAYRLFHIHI 101
           YFV P   L  +Y        YCA+ +F +H+
Sbjct: 135 YFVVPLFFLLCIYYF------YCAFIIFTVHL 160


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 43  NIISLGYYSIQYNREWGW 60
           N+I L    I +NR +GW
Sbjct: 140 NLIRLKNCVIYFNRIFGW 157


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 59  GWYTAGAGLLAYF 71
           G YT  +G LAY+
Sbjct: 359 GTYTKESGFLAYY 371


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.141    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,621
Number of Sequences: 317
Number of extensions: 908
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 105
length of database: 114,650
effective HSP length: 49
effective length of query: 56
effective length of database: 99,117
effective search space:  5550552
effective search space used:  5550552
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)