GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002242-TA|BGIBMGA002242-PA|undefined
         (105 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021419-1|AAX33567.1|  490|Drosophila melanogaster LD03220p pro...    26   8.2  
AF056198-1|AAC12945.1|  489|Drosophila melanogaster Hsp70/Hsp90 ...    26   8.2  
AE014134-80|AAF51511.1|  490|Drosophila melanogaster CG2720-PA p...    26   8.2  

>BT021419-1|AAX33567.1|  490|Drosophila melanogaster LD03220p
          protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 6  RGNQALSAIHLVSGIVPFALALAGDDNAHL 35
          +GNQALSA      +  +  A+A DD  H+
Sbjct: 10 KGNQALSAEKFDEAVAAYTEAIALDDQNHV 39


>AF056198-1|AAC12945.1|  489|Drosophila melanogaster Hsp70/Hsp90
          organizing proteinhomolog protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 6  RGNQALSAIHLVSGIVPFALALAGDDNAHL 35
          +GNQALSA      +  +  A+A DD  H+
Sbjct: 10 KGNQALSAEKFDEAVAAYTEAIALDDQNHV 39


>AE014134-80|AAF51511.1|  490|Drosophila melanogaster CG2720-PA
          protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 6  RGNQALSAIHLVSGIVPFALALAGDDNAHL 35
          +GNQALSA      +  +  A+A DD  H+
Sbjct: 10 KGNQALSAEKFDEAVAAYTEAIALDDQNHV 39


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.141    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,042,764
Number of Sequences: 52641
Number of extensions: 182450
Number of successful extensions: 410
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 407
Number of HSP's gapped (non-prelim): 3
length of query: 105
length of database: 24,830,863
effective HSP length: 74
effective length of query: 31
effective length of database: 20,935,429
effective search space: 648998299
effective search space used: 648998299
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)