Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002241-TA|BGIBMGA002241-PA|IPR000194|ATPase, F1/V1/A1
complex, alpha/beta subunit, nucleotide-binding, IPR000793|ATPase,
F1/V1/A1 complex, alpha/beta subunit, C-terminal, IPR004100|ATPase,
F1/V1/A1 complex, alpha/beta subunit, N-terminal, IPR005723|ATPase, V1
complex, subunit B
(494 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 785 0.0
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 118 1e-27
SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces p... 111 3e-25
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 81 3e-16
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 28 2.6
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 2.6
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 27 4.5
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 27 6.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 7.9
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 27 7.9
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 785 bits (1942), Expect = 0.0
Identities = 370/478 (77%), Positives = 420/478 (87%)
Query: 17 AVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSK 76
A +D+ +PRL+Y TV+ + GPLVILD ++ P+++EIV L L DG++RSGQVLEV+G K
Sbjct: 11 AAVKDYSIKPRLSYNTVNSITGPLVILDNIRRPQYNEIVNLNLPDGSVRSGQVLEVAGHK 70
Query: 77 AVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDI 136
A+VQVFEGTSG+D + T +FTG +R PVSEDMLGRVFNGSG PIDKGP +LAED+LDI
Sbjct: 71 AIVQVFEGTSGVDVRKTTIDFTGHSMRIPVSEDMLGRVFNGSGLPIDKGPNLLAEDYLDI 130
Query: 137 QGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLV 196
G PINP++RIYPEEMIQTGIS+ID +NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLV
Sbjct: 131 NGSPINPYARIYPEEMIQTGISSIDGLNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLV 190
Query: 197 KVPGKSVLDDHEDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERI 256
K P K V D HEDNF+IVFAAMGVN+ETARFF++DFEENGS E V LFLNLANDPTIERI
Sbjct: 191 KRPTKDVHDGHEDNFSIVFAAMGVNLETARFFQRDFEENGSFERVTLFLNLANDPTIERI 250
Query: 257 ITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLA 316
ITPRLAL+A+EFLAYQ EKHVL ILTDM+SYA+ALREVSAAREEVPGRRG+PGYMYTDL+
Sbjct: 251 ITPRLALSASEFLAYQTEKHVLTILTDMTSYADALREVSAAREEVPGRRGYPGYMYTDLS 310
Query: 317 TIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPV 376
TIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQI+VDRQLHN IYPP+
Sbjct: 311 TIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNNAIYPPI 370
Query: 377 NVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYL 436
NVLPSLSRLMKSAIGEGMTR DH DVSNQLYA YAIG+D +MK+VVGEEAL+ +D L L
Sbjct: 371 NVLPSLSRLMKSAIGEGMTRNDHGDVSNQLYAMYAIGRDAASMKSVVGEEALSQEDRLAL 430
Query: 437 EFLTKFEKNFITQGNYENRTVFESLDIGWQLLRIFPKEMLKRIPASTLAEFYPRDSRH 494
EFL KFEK FI+QG YENRT+FE+LD+ W LLRIFP+EML RIP L ++Y R S +
Sbjct: 431 EFLGKFEKTFISQGAYENRTIFETLDLAWSLLRIFPREMLTRIPKKILDQYYSRSSAY 488
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 118 bits (285), Expect = 1e-27
Identities = 102/412 (24%), Positives = 179/412 (43%), Gaps = 26/412 (6%)
Query: 44 DEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQV-FEGTSGIDAKNTLCEFTGDIL 102
D P +++KL D +V + G V + +GT G+ + T TG +
Sbjct: 71 DADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGL-VRGTAVIDTGSPI 129
Query: 103 RTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDV 162
PV LGR+ N G+P+D+ PI A + I + + E+++TGI +D+
Sbjct: 130 SIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDL 189
Query: 163 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDDHEDNFAIVFAAMGVNM 222
+ ARG KI +F AG+ ++ + K G ++ VF +G
Sbjct: 190 LAPYARGGKIGLFGGAGVGKTVFIQELIN--NIAKAHG---------GYS-VFTGVGERT 237
Query: 223 ETARFFKQDFEENGSME-----NVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHV 277
++ +E G ++ L N+P R LT AE+ + V
Sbjct: 238 REGNDLYREMQETGVIKLEGESKAALVFGQMNEPPGARARVALTGLTVAEYFRDIEGQDV 297
Query: 278 LVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 337
L+ + ++ + +A EVSA +P G+ + TD+ + ER + GSIT +
Sbjct: 298 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTKKGSITSVQA 355
Query: 338 LTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRK 397
+ +P DD+T P P T + + R + IYP V+ L S SR+M I +
Sbjct: 356 VYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLDSKSRMMDPRI----LGE 411
Query: 398 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFITQ 449
+H +++ + K +Q + A++G + L+ D L +E K ++ F++Q
Sbjct: 412 EHYNLAGSVQQMLQEYKSLQDIIAILGMDELSEADKLTVERARKVQR-FLSQ 462
>SPAC14C4.14 |atp1||F1-ATPase alpha subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 111 bits (266), Expect = 3e-25
Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 8/311 (2%)
Query: 81 VFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQP 140
V G + + + + T I+ PV E +LGRV + G PID PI + +Q +
Sbjct: 102 VLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTERRRVQLKA 161
Query: 141 INPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPG 200
R E +QTG+ AID M I RGQ+ I IA ++
Sbjct: 162 PGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDT-----ILNHKR 216
Query: 201 KSVLDDHEDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPR 260
+ D V+ A+G T Q EEN S++ + A++ + + P
Sbjct: 217 WNNSSDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVAATASESAPLQYLAPF 276
Query: 261 LALTAAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE 320
E+ KH LV+ D+S A A R++S PGR +PG ++ + + E
Sbjct: 277 SGCAMGEWFRDN-GKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 335
Query: 321 RAGRVEGRNG--SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNV 378
RA ++ ++G S+T +P++ D++ IP IT+GQI+++ +L + I P +NV
Sbjct: 336 RAAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAINV 395
Query: 379 LPSLSRLMKSA 389
S+SR+ +A
Sbjct: 396 GLSVSRVGSAA 406
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 81.4 bits (192), Expect = 3e-16
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 25/289 (8%)
Query: 190 CRQAGLVKVPG-----KSV----LDDHEDNFAIVFAAMGVNMETARFFKQDFEE-----N 235
C Q G +PG K+V L + ++ IV+ G DF E N
Sbjct: 248 CVQGGTTAIPGAFGCGKTVISQSLSKYSNSDLIVYVGCGERGNEMAEVLMDFPELTIDIN 307
Query: 236 GS----MENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEAL 291
G M+ L N +N P R + +T AE+ Q K+V ++ S +AEAL
Sbjct: 308 GKPEPIMKRTTLVANTSNMPVAAREASIYTGITLAEYYRDQ-GKNVSMMADSTSRWAEAL 366
Query: 292 REVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILTMPNDDIT 346
RE+S E+P G+P Y+ LA+ YERAGR R G+++ + ++ P D +
Sbjct: 367 REISGRLAEMPADSGYPAYLGAKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFS 426
Query: 347 HPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTR-KDHSDVSNQ 405
P+ T I + +D++L R+ +P +N S S+ + + R + + +Q
Sbjct: 427 DPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSLSYSKYINALQPWYEERVPGFNTLRDQ 486
Query: 406 LYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFITQGNYEN 454
+ + + +VG+ AL+ D + L+ + +F+ Q Y +
Sbjct: 487 IKQIIQQEDSMLEIIQLVGKSALSETDKVTLDIAGIIKNDFLQQNGYSD 535
Score = 35.1 bits (77), Expect = 0.022
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 30 YKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGID 89
Y ++ V+GP+V+ + E+V++ + G+V+ + K +QV+E TSG+
Sbjct: 25 YGSIFSVSGPVVVAANMLGCSMYELVRVGHEELV---GEVIRIHQDKCTIQVYEETSGLT 81
Query: 90 AKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPI 122
+ + + TG L + + +++G +P+
Sbjct: 82 VGDPV-QRTGKPLSVELGPGLAETIYDGIQRPL 113
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 284 MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 337
+ Y E + +V + VP R+ Y A + E GR+ GR G++ PI
Sbjct: 312 LEQYPEWVGKVVLVQVAVPSRQDVEEYQNLR-AVVNELVGRINGRFGTVEYTPI 364
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 444 KNFITQGNYENRTVFESLDIGWQLLRIFP 472
+N++TQ N+++ + ESLD + L +FP
Sbjct: 433 ENYLTQENFDSDNLSESLDNSVENLTVFP 461
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 361 IYVDRQLHNRQIYPPVNVLPS 381
+Y+ +HN Q +P VNVL S
Sbjct: 354 VYLQEMIHNLQFFPEVNVLYS 374
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 331 SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLS 383
S+++I I + ND TH +P + G ++ D LH+ IY P++S
Sbjct: 444 SLSEIGIPVLSND--THIVPAMVGDAHLAKLASDSLLHDHNIYVQSINFPTVS 494
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 398 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLT 440
+HS++ + C A+G DV +AVV +AL ++ L E LT
Sbjct: 801 EHSNLKEAVL-CLALGADVNYQRAVV--KALLKNNYLIAELLT 840
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 118 SGKPIDKGPPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIP 173
+G P+D P+ F+ I + W YP E I+ + I ++ + + +P
Sbjct: 41 TGSPLDPNTPVKRLFFMRINIAQFSRWDYPYPREYIEE-LKKIHGVHHVEENRDVP 95
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,199,739
Number of Sequences: 5004
Number of extensions: 94240
Number of successful extensions: 222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 209
Number of HSP's gapped (non-prelim): 11
length of query: 494
length of database: 2,362,478
effective HSP length: 76
effective length of query: 418
effective length of database: 1,982,174
effective search space: 828548732
effective search space used: 828548732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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