Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002240-TA|BGIBMGA002240-PA|IPR008042|Retrotransposon,
Pao
(83 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O76925 Cluster: Polyprotein; n=1; Drosophila melanogast... 72 2e-12
UniRef50_Q8IH60 Cluster: GH06606p; n=2; Drosophila melanogaster|... 69 2e-11
UniRef50_UPI00015B4A3D Cluster: PREDICTED: similar to BEL12_AG t... 63 1e-09
UniRef50_Q8I7Q1 Cluster: ORF; n=3; Endopterygota|Rep: ORF - Dros... 60 8e-09
UniRef50_Q4JS97 Cluster: BEL12_AG transposon polyprotein; n=1; A... 57 6e-08
UniRef50_UPI00015B47CF Cluster: PREDICTED: similar to ORF; n=1; ... 54 4e-07
UniRef50_UPI00015B490C Cluster: PREDICTED: similar to polyprotei... 52 2e-06
UniRef50_UPI00015B47AB Cluster: PREDICTED: similar to BEL12_AG t... 52 2e-06
UniRef50_UPI00015B43ED Cluster: PREDICTED: similar to BEL12_AG t... 52 3e-06
UniRef50_Q9NDM9 Cluster: RNase H and integrase-like protein; n=2... 52 3e-06
UniRef50_UPI00015B43F1 Cluster: PREDICTED: similar to polyprotei... 50 1e-05
UniRef50_UPI00015B4468 Cluster: PREDICTED: similar to BEL12_AG t... 49 2e-05
UniRef50_UPI00015B5A69 Cluster: PREDICTED: similar to BEL12_AG t... 48 4e-05
UniRef50_Q4EBB8 Cluster: SD27140p; n=4; Wolbachia endosymbiont o... 48 4e-05
UniRef50_Q8MRT3 Cluster: SD27140p; n=1; Drosophila melanogaster|... 48 4e-05
UniRef50_UPI0000F1EA08 Cluster: PREDICTED: similar to polyprotei... 48 5e-05
UniRef50_UPI0000E46ABA Cluster: PREDICTED: hypothetical protein;... 47 8e-05
UniRef50_Q2MGA5 Cluster: Polyprotein; n=1; Antheraea mylitta|Rep... 46 2e-04
UniRef50_UPI00015B4906 Cluster: PREDICTED: similar to BEL12_AG t... 44 4e-04
UniRef50_UPI00015B47B0 Cluster: PREDICTED: similar to polyprotei... 43 0.001
UniRef50_UPI00004D24A9 Cluster: UPI00004D24A9 related cluster; n... 43 0.001
UniRef50_UPI00015B43BD Cluster: PREDICTED: similar to BEL12_AG t... 42 0.002
UniRef50_UPI00015B47E3 Cluster: PREDICTED: similar to polyprotei... 42 0.003
UniRef50_UPI00004D7033 Cluster: UPI00004D7033 related cluster; n... 42 0.003
UniRef50_A0ND99 Cluster: ENSANGP00000031718; n=1; Anopheles gamb... 40 0.009
UniRef50_UPI0000F1D67F Cluster: PREDICTED: hypothetical protein;... 40 0.013
UniRef50_UPI0000F2005F Cluster: PREDICTED: hypothetical protein;... 39 0.017
UniRef50_UPI0000E49AB6 Cluster: PREDICTED: similar to polyprotei... 39 0.022
UniRef50_UPI000069F1F1 Cluster: UPI000069F1F1 related cluster; n... 39 0.022
UniRef50_UPI00015B4695 Cluster: PREDICTED: similar to gag-pol po... 38 0.038
UniRef50_UPI0000F1FB88 Cluster: PREDICTED: similar to pol polypr... 37 0.088
UniRef50_A6C2S9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.088
UniRef50_Q6IFU1 Cluster: Pol polyprotein; n=6; Schistosoma|Rep: ... 37 0.088
UniRef50_UPI0000F1F528 Cluster: PREDICTED: similar to pol polypr... 36 0.12
UniRef50_UPI0000F1E377 Cluster: PREDICTED: similar to pol polypr... 36 0.15
UniRef50_UPI0000E485BD Cluster: PREDICTED: similar to polyprotei... 36 0.20
UniRef50_UPI00015B630B Cluster: PREDICTED: similar to gag-pol po... 35 0.27
UniRef50_UPI0000E479D9 Cluster: PREDICTED: similar to polyprotei... 35 0.36
UniRef50_Q5LJZ3 Cluster: CG41141-PA; n=1; Drosophila melanogaste... 35 0.36
UniRef50_O02006 Cluster: Retrotransposon ninja DNA; n=8; Drosoph... 35 0.36
UniRef50_UPI0000F1F990 Cluster: PREDICTED: similar to pol polypr... 33 1.4
UniRef50_UPI0000F1E68C Cluster: PREDICTED: similar to LOC562179 ... 31 3.3
UniRef50_A6QX46 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 3.3
UniRef50_A1S5L8 Cluster: Putative uncharacterized protein; n=1; ... 31 4.4
UniRef50_A0LYV6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.4
UniRef50_UPI0000DB7311 Cluster: PREDICTED: similar to 5-azacytid... 31 5.8
UniRef50_A6G8Q1 Cluster: UvrD/REP helicase; n=1; Plesiocystis pa... 31 5.8
UniRef50_Q5C1N9 Cluster: SJCHGC07867 protein; n=1; Schistosoma j... 31 5.8
UniRef50_UPI000069EB55 Cluster: UPI000069EB55 related cluster; n... 30 7.7
UniRef50_Q4KXA7 Cluster: Cytoplasmic dynein heavy chain 2.2; n=6... 30 7.7
UniRef50_Q22360 Cluster: Putative uncharacterized protein him-17... 30 7.7
>UniRef50_O76925 Cluster: Polyprotein; n=1; Drosophila
melanogaster|Rep: Polyprotein - Drosophila melanogaster
(Fruit fly)
Length = 1571
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+FMQ++WL L WD +P DL W N+L ++ + I++PRWL + K+E HG+CDA
Sbjct: 991 IFMQEIWLQELGWDENVPNDLFQRWLNFLQSYSVFEQIRIPRWLSFHPDFKVEHHGFCDA 1050
Query: 61 S 61
S
Sbjct: 1051 S 1051
>UniRef50_Q8IH60 Cluster: GH06606p; n=2; Drosophila
melanogaster|Rep: GH06606p - Drosophila melanogaster
(Fruit fly)
Length = 733
Score = 68.5 bits (160), Expect = 2e-11
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
MQ++WL L WD +LP ++ WQ++L + + I++PRW+ V IE HG+CDAS
Sbjct: 1 MQEIWLQNLGWDDKLPTEMSQRWQSFLEEYSDLNQIRVPRWIWYQPEVVIEHHGFCDAS 59
>UniRef50_UPI00015B4A3D Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 1132
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ +Q+ W A + WD LP+D+ T+W+ T +Q +PR + N ++ELHG+CDA
Sbjct: 886 VLIQECWKAKITWDESLPQDIHTKWKTLATQLSSLQNFSIPRHILCVNPKEVELHGFCDA 945
Query: 61 SCXXXXXXXXXXXXTDNEI 79
S N+I
Sbjct: 946 SMHGYGSCLFARSINSNDI 964
>UniRef50_Q8I7Q1 Cluster: ORF; n=3; Endopterygota|Rep: ORF -
Drosophila melanogaster (Fruit fly)
Length = 2360
Score = 60.1 bits (139), Expect = 8e-09
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+F+QKLW+ +WD EL + K W+ Y N ++ I++PRW+ ++ I++HG+ DA
Sbjct: 1041 LFIQKLWINKSEWDQELSIEDKNYWEKYKENLLLLENIRIPRWINSNSSSVIQIHGFADA 1100
Query: 61 S 61
S
Sbjct: 1101 S 1101
>UniRef50_Q4JS97 Cluster: BEL12_AG transposon polyprotein; n=1;
Anopheles gambiae|Rep: BEL12_AG transposon polyprotein -
Anopheles gambiae (African malaria mosquito)
Length = 1726
Score = 57.2 bits (132), Expect = 6e-08
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 2 FMQKLWLAGLD------WDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELH 55
FMQ++W + WD E+P+ ++ EW+ + H+Q +Q+PR + I I++H
Sbjct: 988 FMQRVWSLKKENGDSYGWDEEIPQQMRQEWEVFERQLTHLQEVQVPRCVTIVGARNIQIH 1047
Query: 56 GYCDAS 61
G+CDAS
Sbjct: 1048 GFCDAS 1053
>UniRef50_UPI00015B47CF Cluster: PREDICTED: similar to ORF; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to ORF -
Nasonia vitripennis
Length = 1535
Score = 54.4 bits (125), Expect = 4e-07
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 4 QKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
Q LW+ DWD+ LPED + W Y + + ++ + R L + + +LHG+ DAS
Sbjct: 957 QDLWIQKCDWDTPLPEDFRERWYAYCESLSELPSLSIDRCLSVTSTRSYQLHGFSDAS 1014
>UniRef50_UPI00015B490C Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1121
Score = 52.4 bits (120), Expect = 2e-06
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ MQ +W+ DWD L D++ W +Y + ++ + WLG ++HGY DA
Sbjct: 481 ILMQNMWILKCDWDLLLLTDIRERWYDYCKGLSTLSSLSIEHWLGGTATCSYQIHGYLDA 540
Query: 61 S 61
S
Sbjct: 541 S 541
>UniRef50_UPI00015B47AB Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 1120
Score = 52.4 bits (120), Expect = 2e-06
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
MQ+ W + WD +P++L T W ++ + + ++ PR + N +IE+HG+ DAS
Sbjct: 680 MQECWKEKISWDESVPQNLFTLWMDFASQLSSLSSVSAPRHVVCVNPSRIEIHGFSDAS 738
>UniRef50_UPI00015B43ED Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 1516
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
MQ+ W + WD +P+ L T W ++ + + ++ PR + N +IE+HG+ DAS
Sbjct: 812 MQECWKEKVSWDESVPQSLFTLWMDFASQLSSLSSVSAPRHVVCVNPSRIEIHGFSDAS 870
>UniRef50_Q9NDM9 Cluster: RNase H and integrase-like protein; n=2;
Bombyx mori|Rep: RNase H and integrase-like protein -
Bombyx mori (Silk moth)
Length = 913
Score = 51.6 bits (118), Expect = 3e-06
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPR-WLGIANNVKIELHGYCDAS 61
+Q++W G WD E+ DL T WQ ++ ++ I +PR +L ++ ++LH + DAS
Sbjct: 130 LQEVWRRGTSWDDEIDNDLSTHWQAWVKQLRNLHNIAIPRCYLNYSDTTTLQLHVFTDAS 189
>UniRef50_UPI00015B43F1 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1392
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ +++LW + DWDS + +D + + N++ +++ I +PR LG N + LH +CDA
Sbjct: 740 LLLRELWKSKKDWDSPVDKDTEQRFHNWVKQLHYLKNIAIPRKLGTGN---VSLHTFCDA 796
Query: 61 S 61
S
Sbjct: 797 S 797
>UniRef50_UPI00015B4468 Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to BEL12_AG
transposon polyprotein, partial - Nasonia vitripennis
Length = 1514
Score = 48.8 bits (111), Expect = 2e-05
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
MQ+ W + WD +P+ L T W ++ + + ++ PR + + +IE+HG+ DAS
Sbjct: 731 MQEFWKEKISWDESVPQKLFTLWIDFASQLSSLSSVSAPRHVVCVDPSRIEIHGFSDAS 789
>UniRef50_UPI00015B5A69 Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 1389
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ +Q+LW + WDS +P D+ E+ ++ +Q +++PRW+ +I LH + DA
Sbjct: 634 LMLQQLWNEKIGWDSPVPVDVAREFTHWFEQTPLLQNLKVPRWIFGTKEDEISLHMFVDA 693
Query: 61 SCXXXXXXXXXXXXTDNEIK 80
S T E++
Sbjct: 694 SEYAYAAALFVRVETSQEVR 713
>UniRef50_Q4EBB8 Cluster: SD27140p; n=4; Wolbachia endosymbiont of
Drosophila ananassae|Rep: SD27140p - Wolbachia
endosymbiont of Drosophila ananassae
Length = 1120
Score = 48.0 bits (109), Expect = 4e-05
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ Q+LW+ LDWDS LP L+ + + + +++PR++G + + IELH + DA
Sbjct: 369 ILFQELWVLNLDWDSPLPLSLEDWYLKCKNDINTLNELEVPRYIGNSTDT-IELHAFSDA 427
Query: 61 S 61
S
Sbjct: 428 S 428
>UniRef50_Q8MRT3 Cluster: SD27140p; n=1; Drosophila
melanogaster|Rep: SD27140p - Drosophila melanogaster
(Fruit fly)
Length = 1015
Score = 48.0 bits (109), Expect = 4e-05
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ Q+ W + L WD +PE L+T W+ + + + Q+PR++ ++LHG+ DA
Sbjct: 280 LIFQESWTSVLQWDDPIPESLRTRWRALVEDLPALTQCQVPRYIASPFR-DVQLHGFADA 338
Query: 61 S 61
S
Sbjct: 339 S 339
>UniRef50_UPI0000F1EA08 Cluster: PREDICTED: similar to polyprotein;
n=1; Danio rerio|Rep: PREDICTED: similar to polyprotein
- Danio rerio
Length = 1210
Score = 47.6 bits (108), Expect = 5e-05
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 1 MFMQKLWLAGLDWDS-ELPEDLKTEWQNYLTNFEHMQAIQLPR-WLGIANNV--KIELHG 56
+ +Q+LW DWD LP+DL W+ + +H+ I +PR + I ++ + ELH
Sbjct: 307 VLIQQLWSKKRDWDDPNLPQDLSRAWETWENELKHLSDITIPRCYSSIPHDAQQQYELHV 366
Query: 57 YCDAS 61
+CDAS
Sbjct: 367 FCDAS 371
>UniRef50_UPI0000E46ABA Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1139
Score = 46.8 bits (106), Expect = 8e-05
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNV-KIELHGYCDAS 61
MQ+LW GLDWD ELP K EW E++ + R L + + L +CDAS
Sbjct: 200 MQRLWQLGLDWDEELPSREKAEWVKLFREMENLDGVSFQRCLTPPGAMRRPTLCVFCDAS 259
>UniRef50_Q2MGA5 Cluster: Polyprotein; n=1; Antheraea mylitta|Rep:
Polyprotein - Antheraea mylitta (Tasar silkworm)
Length = 1919
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
+Q +W AG DWD + E+ +W Y+ + +Q +++PR L A +LH + DAS
Sbjct: 1141 LQDIWRAGTDWDEVISEEAHHQWLEYIGSLSTLQQLRIPRCLTPAAGPG-QLHTFVDAS 1198
>UniRef50_UPI00015B4906 Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 1561
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDAS 61
MQ +W A +DWD +P D+ +W + + + R + + +I++HG+ DAS
Sbjct: 816 MQDIWKAKIDWDETVPNDIYYQWNEFCLQLSCLPDMSFNRHILTNDANEIQIHGFSDAS 874
>UniRef50_UPI00015B47B0 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1832
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANN--VKIELHGYC 58
+ MQ++W +G+ WD +L ++ + W + + + ++PR + + + ELH +C
Sbjct: 1171 ILMQEIWRSGISWDEQLRDEEQVGWLEWTKYLKDVSTCRVPRCITPKGSSFTQTELHVFC 1230
Query: 59 DAS 61
DAS
Sbjct: 1231 DAS 1233
>UniRef50_UPI00004D24A9 Cluster: UPI00004D24A9 related cluster; n=2;
Xenopus tropicalis|Rep: UPI00004D24A9 UniRef100 entry -
Xenopus tropicalis
Length = 734
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWL---GIANNVKIELHGY 57
+ +++L DWDS LP++ K W+++ + + ++ +Q+PR + + V+ E+H +
Sbjct: 91 ILLRQLTSENTDWDSPLPKEKKQRWESWERSLKSLEQLQIPRCYTVGSLTSAVRREIHVF 150
Query: 58 CDAS 61
DAS
Sbjct: 151 SDAS 154
>UniRef50_UPI00015B43BD Cluster: PREDICTED: similar to BEL12_AG
transposon polyprotein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to BEL12_AG transposon polyprotein -
Nasonia vitripennis
Length = 915
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 17/61 (27%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIELHGYCDA 60
+ MQ LW+ DWD+ LPED + W WLG+ + +LHG+ DA
Sbjct: 265 VLMQDLWIQKCDWDTPLPEDFRERW-----------------WLGVTSTRSYQLHGFSDA 307
Query: 61 S 61
S
Sbjct: 308 S 308
>UniRef50_UPI00015B47E3 Cluster: PREDICTED: similar to polyprotein,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to polyprotein, partial - Nasonia vitripennis
Length = 1042
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNV--KIELHGYC 58
+ MQ++W + +DWD L E WQ +L E ++ + R N + ELH +C
Sbjct: 315 ILMQEIWNSKIDWDEVLKEAEFLHWQQWLRELEKVKLCSIARCYQNLNCQIREAELHVFC 374
Query: 59 DAS 61
DAS
Sbjct: 375 DAS 377
>UniRef50_UPI00004D7033 Cluster: UPI00004D7033 related cluster;
n=12; Xenopus tropicalis|Rep: UPI00004D7033 UniRef100
entry - Xenopus tropicalis
Length = 871
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 11 LDWDSELPEDLKTEWQNYLTNFEHMQAIQLPR-WLGIANNV--KIELHGYCDAS 61
+DWD LP DL+ +W+ + + + ++ +Q+PR +L + ++ + E+H +CDAS
Sbjct: 133 VDWDVTLPADLQPKWEKWKLSLKALKQLQIPRNYLSCSLSLTKQREIHIFCDAS 186
>UniRef50_A0ND99 Cluster: ENSANGP00000031718; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031718 - Anopheles gambiae
str. PEST
Length = 557
Score = 39.9 bits (89), Expect = 0.009
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 1 MFMQKLWLA------GLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIEL 54
+ +QK+W WD LPE ++ EW+ ++ ++ I++PR L + + +
Sbjct: 56 LLLQKIWAMKNNSGKNWSWDELLPESMQIEWKGFVNQLNRLEQIRIPRRL--LMDGEWQY 113
Query: 55 HGYCDAS 61
H +CDAS
Sbjct: 114 HIFCDAS 120
>UniRef50_UPI0000F1D67F Cluster: PREDICTED: hypothetical protein; n=9;
Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
rerio
Length = 1381
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKI---ELHGYCD 59
+Q+L ++WD LP+DL W+ + + + ++ +PR ++ KI ELH + D
Sbjct: 999 LQELCQRNMEWDDSLPDDLIPRWEEWKNSLQDLKDFTVPRCYYPSSFSKIVLTELHHFSD 1058
Query: 60 AS 61
AS
Sbjct: 1059 AS 1060
>UniRef50_UPI0000F2005F Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 403
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MFMQKLWLAGLDWDS-ELPEDLKTEWQNYLTNFEHMQAIQLPR----WLGIANNVKIELH 55
+ +Q+LW+ DWD +LP +L+ +W + +++ + LPR + ++V+ E+H
Sbjct: 27 VIVQQLWVKHRDWDDPQLPGELQQKWMKWEEELKYLPEVTLPRCYYPYYMDHSDVRREIH 86
Query: 56 GYCDAS 61
+ DAS
Sbjct: 87 IFSDAS 92
>UniRef50_UPI0000E49AB6 Cluster: PREDICTED: similar to polyprotein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to polyprotein - Strongylocentrotus purpuratus
Length = 1278
Score = 38.7 bits (86), Expect = 0.022
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIAN--NVK-IELHGYCD 59
+Q+L +DWD +LP++ ++ W+ + + ++ +I + R A+ VK +LH + D
Sbjct: 631 LQELCRKAVDWDDQLPDEQRSSWEKWRADLHNLDSISIQRCYKPAHFGEVKTTQLHHFSD 690
Query: 60 AS 61
AS
Sbjct: 691 AS 692
>UniRef50_UPI000069F1F1 Cluster: UPI000069F1F1 related cluster;
n=11; Xenopus tropicalis|Rep: UPI000069F1F1 UniRef100
entry - Xenopus tropicalis
Length = 835
Score = 38.7 bits (86), Expect = 0.022
Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 12 DWDSELPEDLKTEWQNYLTNFEHMQAIQLPRW---LGIANNVKIELHGYCDAS 61
DWD+ LP D +++W+++ + + ++ + +PR +A + + E+H + DAS
Sbjct: 133 DWDTPLPTDKQSKWESWKQSLKDLEELHIPRCYTSTSLAESQRREIHIFSDAS 185
>UniRef50_UPI00015B4695 Cluster: PREDICTED: similar to gag-pol
polyprotein precursor; hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to gag-pol
polyprotein precursor; hypothetical protein - Nasonia
vitripennis
Length = 493
Score = 37.9 bits (84), Expect = 0.038
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWL 44
+ +Q LW+ G+ WD + +LK +W + +++I++PR L
Sbjct: 449 IMLQSLWVQGVRWDDPVSAELKKDWLAFREQLVEIESIRVPRCL 492
>UniRef50_UPI0000F1FB88 Cluster: PREDICTED: similar to pol
polyprotein; n=9; Euteleostomi|Rep: PREDICTED: similar
to pol polyprotein - Danio rerio
Length = 1255
Score = 36.7 bits (81), Expect = 0.088
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPR 42
++ L L +DWDS LP+ ++ W + + + ++ +Q+PR
Sbjct: 534 LRDLTLGSIDWDSPLPQTMEETWVAWRNSLQELRHLQIPR 573
>UniRef50_A6C2S9 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 388
Score = 36.7 bits (81), Expect = 0.088
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 2 FMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAI----QLPRWLGIANNVKIELHGY 57
+ ++L AG SELPED++ EWQ L E Q Q+ W+ +K+ G+
Sbjct: 307 YNKQLVYAGYIRGSELPEDIRLEWQKRLPQLEQKQPFVKTSQVATWIKPRITLKVSSEGW 366
Query: 58 CDAS 61
D +
Sbjct: 367 TDTT 370
>UniRef50_Q6IFU1 Cluster: Pol polyprotein; n=6; Schistosoma|Rep: Pol
polyprotein - Schistosoma mansoni (Blood fluke)
Length = 1680
Score = 36.7 bits (81), Expect = 0.088
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIAN-----NVKIELH 55
+ +Q+L + + WD + E + W N++ + +++PR GI N N ++ELH
Sbjct: 950 LLLQELCKSQIGWDQPINEPYTSIWLNWVNFMRQISHVKIPR--GIKNKLDEPNARVELH 1007
Query: 56 GYCDAS 61
+ DAS
Sbjct: 1008 LFSDAS 1013
>UniRef50_UPI0000F1F528 Cluster: PREDICTED: similar to pol
polyprotein, partial; n=1; Danio rerio|Rep: PREDICTED:
similar to pol polyprotein, partial - Danio rerio
Length = 958
Score = 36.3 bits (80), Expect = 0.12
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRW---LGIANNVKIELHGYCD 59
+Q++ G WD L LK W+ + + +++ + +PR VK E+H + D
Sbjct: 661 LQEMCRQGTGWDDTLYPALKPRWERWQNDLVNLENVNIPRCYVPADFGKVVKTEMHHFSD 720
Query: 60 AS-CXXXXXXXXXXXXTDNEIKSKY 83
AS C D+EI +
Sbjct: 721 ASTCGYGQCSYLRMINEDDEIHCSF 745
>UniRef50_UPI0000F1E377 Cluster: PREDICTED: similar to pol
polyprotein; n=1; Danio rerio|Rep: PREDICTED: similar to
pol polyprotein - Danio rerio
Length = 2201
Score = 35.9 bits (79), Expect = 0.15
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 12 DWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKI---ELHGYCDAS 61
DWD+ L +L++ W+++LT+ + + +++ R A+ ++ ELH + DAS
Sbjct: 1418 DWDTPLSNELQSRWESWLTDLKDLAHVKIDRCYLPADFQEVQRYELHHFSDAS 1470
>UniRef50_UPI0000E485BD Cluster: PREDICTED: similar to polyprotein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to polyprotein, partial -
Strongylocentrotus purpuratus
Length = 630
Score = 35.5 bits (78), Expect = 0.20
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNV 50
M + +LW GL WD L E +TEW + ++L R L I + +
Sbjct: 313 MGLHRLWQLGLGWDDPLAEKEQTEWTKLFEEMTLLNNVKLERCLLIHHKI 362
>UniRef50_UPI00015B630B Cluster: PREDICTED: similar to gag-pol
polyprotein precursor; hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to gag-pol
polyprotein precursor; hypothetical protein - Nasonia
vitripennis
Length = 400
Score = 35.1 bits (77), Expect = 0.27
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 40 LPRWLGIANNVKI-ELHGYCDAS 61
+PRWLG++N+ K ELHG+ DAS
Sbjct: 200 VPRWLGLSNDTKFAELHGFSDAS 222
>UniRef50_UPI0000E479D9 Cluster: PREDICTED: similar to polyprotein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to polyprotein - Strongylocentrotus purpuratus
Length = 1523
Score = 34.7 bits (76), Expect = 0.36
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWL 44
MQKLW G +WD L + EW+ + + + L R L
Sbjct: 991 MQKLWQRGYNWDDHLSPEEDAEWRLLFEEMKGLNGVSLERCL 1032
>UniRef50_Q5LJZ3 Cluster: CG41141-PA; n=1; Drosophila
melanogaster|Rep: CG41141-PA - Drosophila melanogaster
(Fruit fly)
Length = 1135
Score = 34.7 bits (76), Expect = 0.36
Identities = 13/58 (22%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 KLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVK-IELHGYCDAS 61
++W + WD LP++L ++ + ++++ + PR+ A V+ +++H + D+S
Sbjct: 726 RIWRRRVKWDEPLPDELAAAFECWRQEIKYIEEFRCPRYYFGAGRVRTLQMHVFVDSS 783
>UniRef50_O02006 Cluster: Retrotransposon ninja DNA; n=8; Drosophila
simulans|Rep: Retrotransposon ninja DNA - Drosophila
simulans (Fruit fly)
Length = 1360
Score = 34.7 bits (76), Expect = 0.36
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPR-WLGIANNVKIELHGYCD 59
+ ++++W + WD LPE+L + + + + + PR + G +ELH + D
Sbjct: 1228 LLLREIWRQKIQWDEPLPEELSKAFAIWRKEMDAVGQFRCPRHYFGRGAVRAVELHVFVD 1287
Query: 60 AS 61
AS
Sbjct: 1288 AS 1289
>UniRef50_UPI0000F1F990 Cluster: PREDICTED: similar to pol
polyprotein; n=4; Danio rerio|Rep: PREDICTED: similar to
pol polyprotein - Danio rerio
Length = 1822
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWL---GIANNVKIELHGY 57
+ +Q+L WD +P++L W ++ E + ++ R + + ELH +
Sbjct: 1071 IMLQELCRRNYGWDETVPQELLHRWTRWIEELEMLSNFEINRCIKPKDFGTAIHAELHHF 1130
Query: 58 CDAS 61
DAS
Sbjct: 1131 SDAS 1134
>UniRef50_UPI0000F1E68C Cluster: PREDICTED: similar to LOC562179
protein; n=56; Danio rerio|Rep: PREDICTED: similar to
LOC562179 protein - Danio rerio
Length = 834
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 MFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWL---GIANNVKIELHGY 57
+ +Q+L W LP +L+ +W +L F + ++ R L G+ ++LH +
Sbjct: 286 ILLQELCRIRCGWGDLLPSNLQRQWSLWLKEFGKIADFKMDRCLKPAGMDELTNVQLHHF 345
Query: 58 CDAS 61
DA+
Sbjct: 346 ADAN 349
>UniRef50_A6QX46 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 513
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 7 WLAGLDWDSELPEDLKTEW 25
WLAG+DW SE P L +W
Sbjct: 19 WLAGVDWTSEDPTHLSKQW 37
>UniRef50_A1S5L8 Cluster: Putative uncharacterized protein; n=1;
Shewanella amazonensis SB2B|Rep: Putative
uncharacterized protein - Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B)
Length = 126
Score = 31.1 bits (67), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEW 25
+Q +WLAGL W ELP+ + + W
Sbjct: 80 VQAVWLAGLAWLEELPQIMGSRW 102
>UniRef50_A0LYV6 Cluster: Putative uncharacterized protein; n=1;
Gramella forsetii KT0803|Rep: Putative uncharacterized
protein - Gramella forsetii (strain KT0803)
Length = 291
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 24 EWQNYLTNFEHMQAIQLPRWLGIANNVKIEL 54
EWQ T F++ ++LP++L I NN+ E+
Sbjct: 215 EWQKKHTRFDYHNRLRLPQYLEIFNNLGFEI 245
>UniRef50_UPI0000DB7311 Cluster: PREDICTED: similar to
5-azacytidine-induced protein 1 (Pre-acrosome
localization protein 1); n=1; Apis mellifera|Rep:
PREDICTED: similar to 5-azacytidine-induced protein 1
(Pre-acrosome localization protein 1) - Apis mellifera
Length = 631
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 17 LPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVKIE 53
L E LKTEWQ LT ++ Q +++ + I N +K E
Sbjct: 405 LQESLKTEWQTCLTEYKRQQNLRIEQ---IENKIKEE 438
>UniRef50_A6G8Q1 Cluster: UvrD/REP helicase; n=1; Plesiocystis
pacifica SIR-1|Rep: UvrD/REP helicase - Plesiocystis
pacifica SIR-1
Length = 1100
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 4 QKLWLAGLDWDSELPEDLKTEWQNYLTNFEH 34
++LW +DW S+LP W+NY EH
Sbjct: 944 RRLWYV-VDWKSDLPPRDSPGWRNYQAQLEH 973
>UniRef50_Q5C1N9 Cluster: SJCHGC07867 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07867 protein - Schistosoma
japonicum (Blood fluke)
Length = 191
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 16 ELPEDLKTEWQNYLTNFEHMQAIQLPRWL--GIANNVKIELHGYCDAS 61
E+PED +T W +L + + ++ I PR + ++ +EL + DAS
Sbjct: 2 EIPEDERTRWFEFLNDMQQVENISFPRCMLAPDMDHSLLELRIFSDAS 49
>UniRef50_UPI000069EB55 Cluster: UPI000069EB55 related cluster; n=8;
Xenopus tropicalis|Rep: UPI000069EB55 UniRef100 entry -
Xenopus tropicalis
Length = 801
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 3 MQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPR 42
+++L + DWDS LP + W + + + +IQ+PR
Sbjct: 121 LRELTVESCDWDSPLPAAKEQVWIEWRDSLGALSSIQIPR 160
>UniRef50_Q4KXA7 Cluster: Cytoplasmic dynein heavy chain 2.2; n=6;
Eukaryota|Rep: Cytoplasmic dynein heavy chain 2.2 -
Leishmania mexicana
Length = 4470
Score = 30.3 bits (65), Expect = 7.7
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 8 LAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGIANNVK 51
L GL W +E P+DL +TN + + +QLP+W ++ +K
Sbjct: 3745 LHGL-WPAEYPQDLWGALVGTITNVKAGKDLQLPKWAPPSSRIK 3787
>UniRef50_Q22360 Cluster: Putative uncharacterized protein him-17;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein him-17 - Caenorhabditis elegans
Length = 954
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 5 KLWLAGLDWDSELPEDLKTEWQNYLT 30
K WL +DW E E +KT WQ T
Sbjct: 465 KKWLEIMDWPPEFEESMKTLWQKRKT 490
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.135 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,171,059
Number of Sequences: 1657284
Number of extensions: 2715419
Number of successful extensions: 6119
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6077
Number of HSP's gapped (non-prelim): 53
length of query: 83
length of database: 575,637,011
effective HSP length: 62
effective length of query: 21
effective length of database: 472,885,403
effective search space: 9930593463
effective search space used: 9930593463
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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