GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002239-TA|BGIBMGA002239-PA|IPR004837|Sodium/calcium
exchanger membrane region, IPR004481|K+-dependent Na+/Ca+ exchanger
related-protein
         (625 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   2.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   3.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   4.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   6.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   6.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   6.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 118  LREKERAAWVIPTVHPFRENCTPPAIEQFPKP 149
            LR   R   +IP  +P RE+CT P     P P
Sbjct: 984  LRSLNRGLGLIPD-NPSREDCTKPPEPVTPAP 1014


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 460 FIISMLWISFYSYFMV 475
           F + +LWISF+  FM+
Sbjct: 139 FFVILLWISFFLNFML 154


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 29  TTVSEPSAPSKADTTPDESVVKTTPPVEYT 58
           +TVS  ++   + +T D+     TPP  YT
Sbjct: 123 STVSSSTSSIPSPSTTDDLSTNPTPPPHYT 152


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 14/60 (23%), Positives = 25/60 (41%)

Query: 237 SAVFNIMFVISVCALCAGTVSHLNWWPLCRDCFFYALSILVMLCTIANEYVSWPEALFML 296
           S V  + F + + +    T + +  W + +  FF    +L+       E+ S P  LF L
Sbjct: 188 SNVETVKFNLFLLSQAVETFNDIFGWTILQTVFFTVPRVLMYFDIFITEHESKPNWLFFL 247


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 46   ESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETATEGGKKS 89
            + + KT  P  + S+   ++  S  S+G+   +G    EGG +S
Sbjct: 1149 DHIEKTIDPSGHISR---RRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 46   ESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETATEGGKKS 89
            + + KT  P  + S+   ++  S  S+G+   +G    EGG +S
Sbjct: 1149 DHIEKTIDPSGHISR---RRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 46   ESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETATEGGKKS 89
            + + KT  P  + S+   ++  S  S+G+   +G    EGG +S
Sbjct: 1149 DHIEKTIDPSGHISR---RRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 46   ESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETATEGGKKS 89
            + + KT  P  + S+   ++  S  S+G+   +G    EGG +S
Sbjct: 1149 DHIEKTIDPSGHISR---RRSMSASSRGDHHHLGAVTEEGGDES 1189


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 18  AYSVIQAVFSATTVSEPSAPSKADTTPDESVVKTTP-PVEYTSKAGQKKEDSTDSQGNSE 76
           +YSV +   S T   E + P    +      V+TTP P ++  +        T +   +E
Sbjct: 396 SYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTE 455

Query: 77  EVGETATEGGKKSLKG 92
                A    +  + G
Sbjct: 456 APPAPAVSNPQNEVDG 471


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.136    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,439
Number of Sequences: 317
Number of extensions: 5978
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 9
length of query: 625
length of database: 114,650
effective HSP length: 61
effective length of query: 564
effective length of database: 95,313
effective search space: 53756532
effective search space used: 53756532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)