Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002239-TA|BGIBMGA002239-PA|IPR004837|Sodium/calcium
exchanger membrane region, IPR004481|K+-dependent Na+/Ca+ exchanger
related-protein
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1175 + 26702744-26704507 75 2e-13
11_01_0292 - 2200714-2201478,2202691-2203395 71 2e-12
03_05_0545 + 25419031-25420758 69 1e-11
03_01_0564 - 4176177-4178096 67 3e-11
10_08_0133 + 15100049-15101836,15103344-15103382 62 2e-09
11_06_0626 - 25620409-25620706,25620814-25620943,25621034-256212... 53 6e-07
02_05_0116 - 25976234-25976394,25976485-25976701,25977345-259774... 37 0.055
05_07_0337 - 29368823-29368863,29369011-29369104,29369231-293693... 32 1.2
08_02_0706 + 20205305-20205331,20205475-20205592,20206235-202064... 31 2.1
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 2.1
04_04_1408 + 33349232-33349450,33349715-33349782,33349853-333498... 31 3.6
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 30 4.8
04_04_0387 + 24869594-24871480 30 4.8
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 30 6.4
07_01_0359 - 2633735-2634115,2634345-2634600,2634708-2635552,263... 30 6.4
04_04_0090 - 22747049-22747282,22747438-22747847,22748562-227487... 30 6.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.4
04_04_1294 - 32424762-32426309 29 8.4
>12_02_1175 + 26702744-26704507
Length = 587
Score = 74.9 bits (176), Expect = 2e-13
Identities = 107/475 (22%), Positives = 180/475 (37%), Gaps = 36/475 (7%)
Query: 158 HGGLILHILVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATFMAAGSSAPELAT 217
+ L L +LV + L YF +SL+ + LRL P +AG T ++ G+ AP++ +
Sbjct: 111 YAALALWLLVLFYL---LGDTASAYFCASLEGLSAVLRLPPAIAGVTLLSLGNGAPDVLS 167
Query: 218 VVIGVFCA-----------QD--DIGVSGVIGSAVFNIMFVISVCALCAGTVSH-----L 259
V+ +D D+G+SGV+G A+F V V A+ AG +
Sbjct: 168 SVVAFAAGARGGDGGGGGGEDAGDVGLSGVLGGALFVSTVVAGVVAIVAGRRGGGEPVII 227
Query: 260 NWWPLCRDCFFYALSILVMLCTIANEYVS-WPEALFMLIMYGVYCVALRFNTALEQWAMT 318
RD F +++ +L + V+ W A F L +Y Y + + + +
Sbjct: 228 ERRGFVRDVCFLLVALCYLLAVLLTGAVTVWSAASF-LSLYAGYVLLVWTSHCCANASDE 286
Query: 319 LPLP-FKLPTREEQAAL-VTYSRNAAAGPTPAAEGQYSQVDGRTNDTPVQETSYNPTGAY 376
L + K PT + A L V +A+ P P + RT + + ++P
Sbjct: 287 LEVDDTKQPTSDLAAPLLVVDDDDASPPPLPVSSSSKPTSAPRTFARRLVDLLHSPLYLP 346
Query: 377 DNAAYNADPTPVWDPNRAWDXXXXXXXXXXXXXXXXXETAVDPLVKPIGANKFQLACWYI 436
W A TA L + A
Sbjct: 347 RRLTIPDIAAHRWSKPTAV-ATALLSPLLLAATTAPTTTATTLLAATLAGALLAAAA--- 402
Query: 437 AFPVHWSCRHTMPDCRGPWYPVTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTF 496
A + R PW F++S+LW + +V ++ IG G+ V+G T
Sbjct: 403 AATTDAASPPKSRSARLPWLAGGFLMSVLWSYVLARELVALLVSIGVAAGVEAGVLGATV 462
Query: 497 VAAGVSVPDALSSLAV-IKEGYG----DMAVSNAVGSNVFDILVCLGLPWFLQTAVIHPG 551
+A G S+ D ++ +A+ + G G AV+ + F+ +V LGL + HP
Sbjct: 463 LAWGNSLGDLVADVALATRRGDGGAGAQTAVAGCYAAPAFNTVVGLGLSLTVAAGARHPE 522
Query: 552 SHVNVYSKGLIYXXXXXXXXXXXXXXAT-HANGWKLDRKYGAVLMVWYVLFITLA 605
++ V +Y A A G +LD G L+V Y +F+ ++
Sbjct: 523 AYA-VEGGAAVYVAVGFLAAALVWAVAVLPARGMRLDAVLGVGLLVIYFVFLCVS 576
Score = 30.3 bits (65), Expect = 4.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 452 RGPWYPVTFIISMLWISFY------SYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPD 505
R PW + L + FY S + + + L +P + G+T ++ G PD
Sbjct: 105 RAPWLGYAALALWLLVLFYLLGDTASAYFCASLEGLSAVLRLPPAIAGVTLLSLGNGAPD 164
Query: 506 ALSSLAVIKEG 516
LSS+ G
Sbjct: 165 VLSSVVAFAAG 175
>11_01_0292 - 2200714-2201478,2202691-2203395
Length = 489
Score = 71.3 bits (167), Expect = 2e-12
Identities = 37/148 (25%), Positives = 76/148 (51%)
Query: 458 VTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSSLAVIKEGY 517
++F++S+ WIS + ++ + IG + P ++G+T +A G SV D ++ +A+ K G
Sbjct: 334 ISFVMSVFWISTMAGELLNCLAAIGVIMDFPPAILGMTVLAWGNSVGDLVADVALAKSGQ 393
Query: 518 GDMAVSNAVGSNVFDILVCLGLPWFLQTAVIHPGSHVNVYSKGLIYXXXXXXXXXXXXXX 577
+A++ +F++LV LG +QTA ++P ++V + G++
Sbjct: 394 PTIAIAGCFAGPMFNMLVGLGTALVIQTARVYPKAYVLEFHVGIVVAFVFLLLSLMGTLL 453
Query: 578 ATHANGWKLDRKYGAVLMVWYVLFITLA 605
+++ R +G LM Y+LF ++
Sbjct: 454 MVTWTRFRVPRFWGYCLMGLYILFTVVS 481
Score = 49.6 bits (113), Expect = 7e-06
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 166 LVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATFMAAGSSAPE--LATVVIGVF 223
L+ + F LA +F ++ R+ LRL+P +A T +A G+ AP+ + +G
Sbjct: 44 LLLLLHFRVLAAAAGTHFSPAVSRLAARLRLSPSMAAVTLLALGNGAPDAFASAAALGGA 103
Query: 224 CAQDDIGVSGVIGSAVFNIMFVISVCALCAGTVSHLNWWPLCRDCFFYALSIL-VMLCTI 282
G++ ++ + F FV+ AL A + + RD FFY L+ + +
Sbjct: 104 GGMRRAGLAAILSAGAFVSAFVVGAVALIAAPFA-VPPASFARDVFFYLLAASGLFYIYL 162
Query: 283 ANEYVSWPEALFMLIMYGVYCVAL 306
+ E W +A+ +++ Y V+ V L
Sbjct: 163 SAEIYLW-QAIGLVLFY-VFFVGL 184
>03_05_0545 + 25419031-25420758
Length = 575
Score = 68.9 bits (161), Expect = 1e-11
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 452 RGPWYPVTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSSLA 511
R PW F++S+LW + +V ++ IGY +G+ +V+G+T +A G S+ D +S++A
Sbjct: 404 RVPWLAAGFLMSVLWAYTLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVA 463
Query: 512 VIKE---GYGDMAVSNAVGSNVFDILVCLGLPWFLQTAVIHPGSHVNVYSKGLIYXXXXX 568
+ G AVS +F+ +V LGL L +P + + G +Y
Sbjct: 464 MALHGGAGGAQTAVSGCYAGPLFNTVVGLGLSLTLAAGSQYPAPFA-IPAGGAVYEAVGF 522
Query: 569 XXXXXX-XXXATHANGWKLDRKYGAVLMVWYVLFITLASLYELNIF 613
A G +LDR YG L+ Y+ F+T+ L ++
Sbjct: 523 LGAGLAWALLVVPARGMRLDRVYGMGLIAIYLAFVTIRVFDSLGLW 568
Score = 57.6 bits (133), Expect = 3e-08
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 89 SLKGLXXXXXXXXXXXXXAGYEDS--KETQDLREKERAAWVIPTVHPFRENCTPPAIEQF 146
+L+G AG E +E Q + E + T HP C P +
Sbjct: 46 ALRGSASRSRSGSSSSSSAGEEQGSCQELQSIEGGEARCLYLRT-HP---PCAPAGYVDY 101
Query: 147 PKPLM-GQKARKHGGLILHILVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATF 205
+ G G +L F L EYF +SL+ + ELRL P +AG T
Sbjct: 102 LRLFYCGFAHAPAAGYAAAVLWLAVLFYLLGDTASEYFCASLEGLSAELRLPPAIAGVTL 161
Query: 206 MAAGSSAPELATVVIGVFCAQD--DIGVSGVIGSAVFNIMFVISVCALCA-------GTV 256
++ G+ AP++ V+ F A D +G++ +G A+F V V AL A G V
Sbjct: 162 LSLGNGAPDVFASVVS-FAAGDGGGVGLNSALGGALFVSTVVAGVVALAAASRAGRGGVV 220
Query: 257 SHLNWWPLCRDCFFYALSILVMLCTIANEYVS-WPEALFM 295
L + RD F L++ +L + V+ W A F+
Sbjct: 221 VELRGF--VRDICFLLLALCSLLAILVTGTVTVWVSASFV 258
Score = 29.5 bits (63), Expect = 8.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 485 LGIPDTVMGLTFVAAGVSVPDALSSLAVIKEG-YGDMAVSNAVGSNVFDILVCLGL 539
L +P + G+T ++ G PD +S+ G G + +++A+G +F V G+
Sbjct: 150 LRLPPAIAGVTLLSLGNGAPDVFASVVSFAAGDGGGVGLNSALGGALFVSTVVAGV 205
>03_01_0564 - 4176177-4178096
Length = 639
Score = 67.3 bits (157), Expect = 3e-11
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 153 QKARKHGGLILHI-LVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATFMAAGSS 211
++ R G +L + L A+F +G +YF SL+++ LRL P VAG T + G+
Sbjct: 124 ERFRVLGYAVLGVCLAALFYMLGNTAA--DYFCCSLEKMSALLRLPPTVAGVTLLPFGNG 181
Query: 212 APEL-ATVVIGVFCAQDDIGVSGVIGSAVFNIMFVISVCALCAGTVS-HLNWWPLCRDCF 269
AP++ A++ + D+G++ V+G AVF V+ +LC + ++ RD
Sbjct: 182 APDVFASIAAFMGTGAGDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQIDRRCFVRDVG 241
Query: 270 FYALSILVM-LCTIANEYVSWPEALFMLIMYGVYCVALRFNTALEQWAMTLPLPFKLP 326
F+ ++++ + + I + W +F+ I Y VY + N L + A L P
Sbjct: 242 FFLMTLVALSIILIVGKVTVWGAIMFVSI-YVVYAFVVAANEVLRKHARRLKFDVVTP 298
Score = 59.3 bits (137), Expect = 9e-09
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 454 PWYPVTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSSLAVI 513
PW F++S++W + +V ++ G LGI +++GLT +A G S+ D +S++A+
Sbjct: 472 PWVLGGFVMSIIWFYIIANELVALLVAFGVILGINPSILGLTVLAWGNSMGDLMSNVALA 531
Query: 514 KEGYGD---MAVSNAVGSNVFDILVCLGLPWFLQTAVIHPGSHVNVYSKGLIYXXXXXXX 570
G GD +A+S +F+ L LG+ L P S+V LIY
Sbjct: 532 MNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLLGAWSTAPNSYVLPQDSSLIYTMSFLVG 590
Query: 571 XXXXXXXATHANGWKLDRKYGAVLMVWYVLFI 602
G + ++ G L+ Y +F+
Sbjct: 591 GLIWALVMLPRGGMQPNKILGVGLIALYSVFL 622
Score = 37.1 bits (82), Expect = 0.042
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 485 LGIPDTVMGLTFVAAGVSVPDALSSLAV-IKEGYGDMAVSNAVGSNVFDILVCLG 538
L +P TV G+T + G PD +S+A + G GD+ +++ +G VF V +G
Sbjct: 164 LRLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVGLNSVLGGAVFVTCVVVG 218
>10_08_0133 + 15100049-15101836,15103344-15103382
Length = 608
Score = 61.7 bits (143), Expect = 2e-09
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 455 WYPVTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSSLAVIK 514
W F++S+ W + ++ ++ + +G+ +GLT +A G S+ D +++LAV
Sbjct: 435 WLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWGNSLGDLVANLAVAS 494
Query: 515 EGYG----DMAVSNAVGSNVFDILVCLGLPWFLQTAVIHPGSHVNVYSKGLIYXXXXXXX 570
G G +AV+ G VFD+LV LG+ L + HP G
Sbjct: 495 RGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRPVAMPAEAGPFQTLGFAAA 554
Query: 571 XXXXXXXATHANGWKLDRKYGAVLMVWYVLFITL 604
G ++DR G L+ Y+ F+ +
Sbjct: 555 GICWAVVVMSRRGMRVDRTLGFGLLAIYLCFLCI 588
Score = 54.4 bits (125), Expect = 3e-07
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 150 LMGQKARKHGGLILHILVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATFMAAG 209
+ G++ R G ++ +A+ ++ L YF SSL+ + LRL+P +AG T ++ G
Sbjct: 109 VFGEERRVLGYAVMAAWLAVLFYL-LGDTAAVYFCSSLEGLSRLLRLSPAIAGVTLLSLG 167
Query: 210 SSAPELATVVIGVFCAQDD-----IGVSGVIGSAVFNIMFVISVCALCAGTVS-HLNWWP 263
+ AP+ + + + +G++GV+GSA+ V+ V + G ++
Sbjct: 168 NGAPDALSTIASFASGGGEGETTAVGLNGVLGSAMLVSSAVLGVIGVRLGARGVAVDRVD 227
Query: 264 LCRDCFFYALSILVMLCTIANEYVSWPEALFMLIMYGVYCVALRF 308
RD F ++ + +A V+ AL +Y VY VA+ F
Sbjct: 228 FYRDASFLLAALAAVAVVLAAGEVTIWGALAFTSLYVVYVVAVAF 272
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 485 LGIPDTVMGLTFVAAGVSVPDALSSLAVIKEGYGDMAVSNAVGSN 529
L + + G+T ++ G PDALS++A G G+ + AVG N
Sbjct: 152 LRLSPAIAGVTLLSLGNGAPDALSTIASFASGGGE-GETTAVGLN 195
>11_06_0626 -
25620409-25620706,25620814-25620943,25621034-25621250,
25621894-25622015,25622119-25622267,25622642-25622759,
25622840-25623185
Length = 459
Score = 53.2 bits (122), Expect = 6e-07
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 458 VTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSS-LAVIKEG 516
+ FI S+++IS +Y + + I G+ V+ T +AAG S PD ++S +A ++
Sbjct: 290 IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQI 349
Query: 517 YGDMAVSNAVGSNVFDILVCLGLPWFLQT 545
D A++N SN +I V +G+PW + T
Sbjct: 350 TADSAITNITCSNSVNIYVGIGVPWLVDT 378
>02_05_0116 -
25976234-25976394,25976485-25976701,25977345-25977466,
25977570-25977718,25978095-25978212,25978293-25978638
Length = 370
Score = 36.7 bits (81), Expect = 0.055
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 458 VTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSS-LAVIKEG 516
+ FI S+++IS +Y + + I G+ V+ T +AAG S PD ++S +A ++
Sbjct: 290 IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQI 349
Query: 517 YGDMAVSN 524
D A++N
Sbjct: 350 TADSAIAN 357
>05_07_0337 -
29368823-29368863,29369011-29369104,29369231-29369347,
29369751-29369804,29369910-29370026,29370170-29370310,
29370402-29370820,29370906-29370934,29371287-29371354,
29371833-29371907
Length = 384
Score = 32.3 bits (70), Expect = 1.2
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 7/143 (4%)
Query: 165 ILVAMFTFIGLAIVCDEYFVSSLDRICEELRLAPDVAGATFMAAGSSAPELATVVIGVFC 224
I +A+ T L + Y VS+++ E L+ + +A E A VI
Sbjct: 223 IWLALMTL--LTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALK 280
Query: 225 AQDDIGVSGVIGSAVFNIMFVISVCALCAGTVS---HLNWWPLCRDCFFYALSILVMLCT 281
+ DI + +GSA MFV+ V + A T+ L++ L F L+ILV T
Sbjct: 281 NKMDITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLF--LAILVTAFT 338
Query: 282 IANEYVSWPEALFMLIMYGVYCV 304
+ + + L +++ Y V V
Sbjct: 339 LQEGESHYLKGLILVLCYAVISV 361
>08_02_0706 +
20205305-20205331,20205475-20205592,20206235-20206416,
20206505-20206612,20206717-20206781,20207152-20207257,
20207592-20207675,20208540-20208668,20208974-20209041,
20209674-20209846,20210371-20210444,20210515-20210628,
20210834-20210920,20211028-20211119,20211205-20211307
Length = 509
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 527 GSNVFDILVCLG-LPWFLQTAVIHPGSHVNVYSKGLI 562
GS +FD+LVC G L F+ TA+ + G V + + +I
Sbjct: 71 GSEIFDVLVCGGTLGIFVATALSYKGLRVGIIERNII 107
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 24 AVFSATTVSEPSAPSKADTTPDESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETAT 83
AV S S+ S++D+ D+ KT P + + A +K+E+S+DS + E +
Sbjct: 239 AVAKKKEESSESSDSESDSDSDDEAAKTIIPAK--AAAVKKEEESSDSSDSDSESESDSD 296
Query: 84 EGGKKSL 90
E K ++
Sbjct: 297 EPAKPTI 303
Score = 29.9 bits (64), Expect = 6.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 35 SAPSKADTTPDESVVKTTPPVEYTSKAG-QKK---EDSTDSQGNSEEVGETATE 84
S+ S +D DE KT PV+ S A QKK DS+DS +SE + T+
Sbjct: 183 SSDSSSDEESDEDDKKTAAPVKKPSVAAIQKKTQESDSSDSDSDSESDEDVPTK 236
>04_04_1408 +
33349232-33349450,33349715-33349782,33349853-33349881,
33349973-33350169,33350247-33350459,33350621-33350755,
33351122-33351238,33351332-33351385,33351574-33351690,
33352199-33352292,33352575-33352585
Length = 417
Score = 30.7 bits (66), Expect = 3.6
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 178 VCDEYFVSSLDRICEELRLAPDVAGATFMAAGSSAPELATVVIGVFCAQDDIGVSGVIGS 237
+ EY V++++ + L L + +A E A+ ++ + DI + IGS
Sbjct: 277 ILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGS 336
Query: 238 AVFNIMFVISVCALCA---GTVSHLNWWPLCRDCFFYALSILVMLCTIANEYVSWPEALF 294
+ MFVI C + G LN+ F +++LV+ + + ++ + L
Sbjct: 337 STQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLF--ITVLVVAFMLQDGVANYLKGLM 394
Query: 295 MLIMY 299
+++ Y
Sbjct: 395 LILCY 399
>11_06_0634 -
25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 27 SATTVSEPSAPSKADTTPDESVVKTTPPVEYTSKAGQKKEDS--TDSQGNSEEVGETATE 84
+A+ S PS S + P + P S G+ +EDS T S G+ E+ +
Sbjct: 11 AASKRSSPSPSSSSAPPPKRPKAEAAPASPTASVPGRIEEDSAATKSAGSGEDAAAKRDQ 70
Query: 85 GGKKS 89
GG K+
Sbjct: 71 GGDKA 75
>04_04_0387 + 24869594-24871480
Length = 628
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 20 SVIQAVFSATTVSEPSAPSKADTTPDESVVKTTPPVEY--TSKAGQKKEDSTDSQGNSEE 77
+ I A S+ +A A +TP +T PP E+ ++AG+ K+ S G E
Sbjct: 57 TTIHASSSSAAAGAAAASFPASSTPPPRPPRTDPPEEHPTVARAGRSKKHRKPSGGRIEG 116
Query: 78 VGETATEGGKKS 89
G+ E ++
Sbjct: 117 GGDVRREAKSRA 128
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 333 ALVTYSRNAAAGPTPAAEGQYSQVDGRTNDTPVQETSYNPTGAYDNAAYNADPTPVWDPN 392
A TY ++A AGP A +G G P + +Y A +NA Y P DPN
Sbjct: 558 APATYGQSAPAGPGYAQQGAQ---QGGYAQYPQSQPAYGDQAAQNNANYGYQGAPA-DPN 613
>07_01_0359 -
2633735-2634115,2634345-2634600,2634708-2635552,
2635681-2635956,2636778-2636941,2637924-2638197
Length = 731
Score = 29.9 bits (64), Expect = 6.4
Identities = 8/17 (47%), Positives = 15/17 (88%)
Query: 460 FIISMLWISFYSYFMVW 476
F++S+ W+SF +YF++W
Sbjct: 155 FLLSVYWVSFVTYFVLW 171
>04_04_0090 -
22747049-22747282,22747438-22747847,22748562-22748757,
22749511-22749583,22749673-22749753,22749855-22749940,
22750050-22750126,22750313-22750409,22751025-22752020,
22752882-22752926
Length = 764
Score = 29.9 bits (64), Expect = 6.4
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 3 RPRRHRWLTISVFFIAYSVIQAVFSATTVS---EPSAPSKA--DTTPDESVVKTTPPVEY 57
+P +H L I A S+++ +F S E P K + T D VK +
Sbjct: 246 KPFKHEKLVIDSMESALSIVRILFRDAFNSGLFEHEKPPKPIFENTLDRQEVKHKRKQDK 305
Query: 58 TSKAGQKKEDSTDSQGNSEEVGETATEGG--KKSLKG 92
K G+K + G +GE +GG ++ LKG
Sbjct: 306 RKKKGKKGGGGSGGGGGGGSIGEEVPKGGGVRERLKG 342
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 8.4
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 10 LTISVFFIAY-SVIQAVFSATTVSEPSAPSKADTTPDESVVKTTPPVEYTSKAG-QKKED 67
+ I FF+AY + Q +FS V P AP + D+ V+ TP K G +KKE
Sbjct: 320 ILIRRFFLAYLTYAQTIFSTPPVQPPMAPEDEELLRDDEVL--TP----VKKDGIRKKER 373
Query: 68 STD 70
TD
Sbjct: 374 PTD 376
>04_04_1294 - 32424762-32426309
Length = 515
Score = 29.5 bits (63), Expect = 8.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 335 VTYSRNAAAGPTPAAEGQYSQV----DGRTNDTPVQETSYNPTGAYDNAAYNADPTPVWD 390
V +R A PT +G+ V DGRT +TP + NP+G +AA A +
Sbjct: 281 VESARRALEEPTRNFDGKMLNVQKAIDGRTKNTPGMNANSNPSGTAASAAAAAAAAQMTA 340
Query: 391 PNRA 394
P A
Sbjct: 341 PATA 344
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.136 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,950,339
Number of Sequences: 37544
Number of extensions: 729088
Number of successful extensions: 2097
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2058
Number of HSP's gapped (non-prelim): 41
length of query: 625
length of database: 14,793,348
effective HSP length: 86
effective length of query: 539
effective length of database: 11,564,564
effective search space: 6233299996
effective search space used: 6233299996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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