Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002238-TA|BGIBMGA002238-PA|IPR007087|Zinc finger,
C2H2-type
(301 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 99 3e-23
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 86 3e-19
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 86 3e-19
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 85 8e-19
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 75 9e-16
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 60 1e-11
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 53 2e-09
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 47 2e-07
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 42 7e-06
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 39 4e-05
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 8.5
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 99.1 bits (236), Expect = 3e-23
Identities = 51/136 (37%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 138 APSDIAQALGIPPTDPLLLESLAQGYAMELEYARILQQENEAKL-MNARKQRPKKYKCPH 196
APS A A G+PP P + + E ++ RK+ P
Sbjct: 262 APSPTAGAGGLPPQVPSPRSQRRYTGRATCDCPNCQEAERLGPAGVHLRKKNIHSCHIPG 321
Query: 197 CNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCG 256
C + LK H+R HTGERP+ C+ CGK FTR++EL RH R H+G + F C C
Sbjct: 322 CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPICN 381
Query: 257 KKFGRRDHLKKHTRTH 272
K+F R DHL KH +TH
Sbjct: 382 KRFMRSDHLAKHVKTH 397
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 194 CPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPC- 252
CP+C G H+R + + C CGK + + L H R H+G RPF C
Sbjct: 293 CPNCQEA-ERLGPAGVHLR---KKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCN 348
Query: 253 -ATCGKKFGRRDHLKKHTRTHFVQAERMMPV 282
CGK+F R D L++H RTH + P+
Sbjct: 349 WLFCGKRFTRSDELQRHLRTHTGEKRFACPI 379
Score = 46.0 bits (104), Expect = 3e-07
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 187 QRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSG 246
+RP C F+ + +L+ H+R HTGE+ + C C K F R++ L +H + H+G
Sbjct: 342 ERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPI--CNKRFMRSDHLAKHVKTHNG 399
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 86.2 bits (204), Expect = 3e-19
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K ++CP C+ FS + + H+R H+GERPY+C + C K+F+ + LT+H RIHSG +P
Sbjct: 48 KPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC--RLCKKAFSDSSTLTKHLRIHSGEKP 105
Query: 250 FPCATCGKKFGRRDHLKKHTRTHFVQAERMMP 281
+ C C +F + +L +H R H A MMP
Sbjct: 106 YECKLCLLRFSQSGNLNRHMRVH--GAASMMP 135
Score = 81.8 bits (193), Expect = 6e-18
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K Y+C CN FS L H+R H+GE+P++C C + F+++ +T H R HSG RP
Sbjct: 20 KPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV--CDRRFSQSSSVTTHMRTHSGERP 77
Query: 250 FPCATCGKKFGRRDHLKKHTRTH 272
+ C C K F L KH R H
Sbjct: 78 YRCRLCKKAFSDSSTLTKHLRIH 100
Score = 74.1 bits (174), Expect = 1e-15
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 201 FSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFG 260
++ LK H+R H+GE+PY+C + C KSF++ LT H R HSG +PF C C ++F
Sbjct: 3 YARPSTLKTHLRTHSGEKPYRCID--CNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFS 60
Query: 261 RRDHLKKHTRTH 272
+ + H RTH
Sbjct: 61 QSSSVTTHMRTH 72
Score = 47.2 bits (107), Expect = 1e-07
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 229 KSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTHFVQAERMMPV 282
KS+ R L H R HSG +P+ C C K F + +L H RTH + PV
Sbjct: 1 KSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV 54
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 86.2 bits (204), Expect = 3e-19
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K ++CP C+ FS + + H+R H+GERPY+C + C K+F+ + LT+H RIHSG +P
Sbjct: 304 KPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC--RLCKKAFSDSSTLTKHLRIHSGEKP 361
Query: 250 FPCATCGKKFGRRDHLKKHTRTHFVQAERMMP 281
+ C C +F + +L +H R H A MMP
Sbjct: 362 YECKLCLLRFSQSGNLNRHMRVH--GAASMMP 391
Score = 80.2 bits (189), Expect = 2e-17
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 174 QQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTR 233
++ + L+ Q+P C C ++ LK H+R H+GE+PY+C + C KSF++
Sbjct: 234 RRRHSINLLEEDNQKPNV--CRICGKSYARPSTLKTHLRTHSGEKPYRCID--CNKSFSQ 289
Query: 234 NEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
LT H R HSG +PF C C ++F + + H RTH
Sbjct: 290 AANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTH 328
Score = 54.0 bits (124), Expect = 1e-09
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 217 ERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTHFVQA 276
++P C + CGKS+ R L H R HSG +P+ C C K F + +L H RTH +
Sbjct: 247 QKPNVC--RICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEK 304
Query: 277 ERMMPV 282
PV
Sbjct: 305 PFRCPV 310
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 84.6 bits (200), Expect = 8e-19
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K ++C C+ F+ + LK H+R+HTGERPY+C+ +C + F + L RH R+H+G RP
Sbjct: 161 KPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE--HCDRQFVQVANLRRHLRVHTGERP 218
Query: 250 FPCATCGKKFGRRDHLKKHTRTH 272
+ C C KF + LK H H
Sbjct: 219 YGCEHCSMKFSDSNQLKAHVLIH 241
Score = 81.0 bits (191), Expect = 1e-17
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 188 RPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGV 247
R + + C CN F L+ H R HTGE+P++C E C K FTR+ L H R+H+G
Sbjct: 131 RDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQE--CHKRFTRDHHLKTHMRLHTGE 188
Query: 248 RPFPCATCGKKFGRRDHLKKHTRTH 272
RP+ C C ++F + +L++H R H
Sbjct: 189 RPYRCEHCDRQFVQVANLRRHLRVH 213
Score = 79.4 bits (187), Expect = 3e-17
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
+ Y+C HC+ F L+ H+R+HTGERPY C+ +C F+ + +L H IH+ +P
Sbjct: 189 RPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCE--HCSMKFSDSNQLKAHVLIHTNEKP 246
Query: 250 FPCATCGKKFGRRDHLKKHTRTHFVQAER 278
F C C +F RR HL H +AER
Sbjct: 247 FECDKCRGRFRRRHHLVHHKCGGEEEAER 275
Score = 58.8 bits (136), Expect = 5e-11
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 170 ARILQQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGK 229
+R L N N + PK+ S + ++ + +RP+ C+ C +
Sbjct: 85 SRKLNNNNVVSSTNQEIRGPKRKTWKVEEDSPSPTSSVSPEVKDSSRDRPFTCEV--CNR 142
Query: 230 SFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
SF L H+R H+G +PF C C K+F R HLK H R H
Sbjct: 143 SFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLH 185
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 74.5 bits (175), Expect = 9e-16
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K ++C C+ F+ + LK H+R+HTGERPY+C+ +C + F + L RH R+H+G RP
Sbjct: 8 KPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE--HCDRQFVQVANLRRHLRVHTGERP 65
Query: 250 FPCATCGKK 258
+ C C K
Sbjct: 66 YGCEHCSMK 74
Score = 67.3 bits (157), Expect = 1e-13
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 212 RIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRT 271
R HTGE+P++C E C K FTR+ L H R+H+G RP+ C C ++F + +L++H R
Sbjct: 2 RTHTGEKPFECQE--CHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRV 59
Query: 272 H 272
H
Sbjct: 60 H 60
Score = 41.9 bits (94), Expect = 6e-06
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 241 KRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
+R H+G +PF C C K+F R HLK H R H
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMRLH 32
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 60.5 bits (140), Expect = 1e-11
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 193 KCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPF-- 250
+C C+ S L+ H R HTGERP+KC K CG++FT L H +H P
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERPFKC--KICGRAFTTKGNLKTHMGVHRAKPPMRV 193
Query: 251 --PCATCGKKFGRRDHLKKHTRTHFVQAERMMPVFVPLAAM---PHVAAYPYLY 299
C C KKF L++H R H + + P + A + P +P ++
Sbjct: 194 LHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSIH 247
Score = 41.1 bits (92), Expect = 1e-05
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 171 RILQQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEK--NCG 228
R+L ++ ++ + +KC C F+ G LK H+ +H + P + + C
Sbjct: 142 RVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCH 201
Query: 229 KSFTRNEELTRHKRIHSG 246
K FT L +H R+H+G
Sbjct: 202 KKFTNALVLQQHIRLHTG 219
Score = 33.5 bits (73), Expect = 0.002
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 192 YKCPHCNVGFSNNGQLKGHIRIHTGE 217
++CP C+ F+N L+ HIR+HTGE
Sbjct: 195 HQCPVCHKKFTNALVLQQHIRLHTGE 220
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 249 PFPCATCGKKFGRRDHLKKHTRTH 272
P C C + + L+ H RTH
Sbjct: 134 PNQCVICHRVLSCKSALQMHYRTH 157
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 53.2 bits (122), Expect = 2e-09
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 217 ERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKH 268
+R + C K C + FT++ L H+R H+ RP+ C CGK F R+DHL+ H
Sbjct: 77 KRQFIC--KYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 52.0 bits (119), Expect = 5e-09
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 184 ARKQRPKK-YKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRH 240
A K +PK+ + C +CN F+ + L H R HT ERPY CD CGK+F R + L H
Sbjct: 71 AGKLKPKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCD--ICGKAFRRQDHLRDH 126
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 248 RPFPCATCGKKFGRRDHLKKHTRTH 272
R F C C ++F + +L H RTH
Sbjct: 78 RQFICKYCNRQFTKSYNLLIHERTH 102
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 46.8 bits (106), Expect = 2e-07
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 173 LQQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFT 232
L+Q N +K+ + K+ CP C L+ H+R H G +P++C++ C +
Sbjct: 215 LEQWNHSKV---HIREDKRLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNK--CDYTCV 269
Query: 233 RNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
L H + HS V + C C LK H R +
Sbjct: 270 NKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRRY 309
Score = 25.8 bits (54), Expect = 0.39
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 172 ILQQE--NEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCD 223
++Q+E E N + + C +CN+ F + H+ H P+ C+
Sbjct: 449 VVQEEAKKEESDSNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYHGFHNPFTCN 502
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 41.5 bits (93), Expect = 7e-06
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 193 KCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSF 231
KC C FS L+GHIR HTGE+P+ C C ++F
Sbjct: 9 KCTICPKAFSRPWLLQGHIRTHTGEKPFSC--TYCNRAF 45
Score = 38.3 bits (85), Expect = 7e-05
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 211 IRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKF 259
IR HT P KC C K+F+R L H R H+G +PF C C + F
Sbjct: 1 IRTHT--LPCKCTI--CPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAF 45
Score = 25.8 bits (54), Expect = 0.39
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 243 IHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
I + P C C K F R L+ H RTH
Sbjct: 1 IRTHTLPCKCTICPKAFSRPWLLQGHIRTH 30
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 39.1 bits (87), Expect = 4e-05
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 207 LKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLK 266
L+ H+R H G +P++C++ C + L H + HS V + C C LK
Sbjct: 4 LEYHLRNHAGSKPFQCNK--CDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLK 61
Query: 267 KHTRTH 272
H R +
Sbjct: 62 IHLRRY 67
Score = 26.6 bits (56), Expect = 0.23
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKR 242
K ++C C+ N L H++ H+ Y C ++C + L H R
Sbjct: 15 KPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSC--RDCSYATKYCHSLKIHLR 65
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 172 ILQQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGH 210
+ Q + + N R + K K + G +NNG GH
Sbjct: 160 LTQTQVKIWFQNRRSKYKKMMKAAQVSGGNNNNGTPGGH 198
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.318 0.133 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,234
Number of Sequences: 317
Number of extensions: 2914
Number of successful extensions: 70
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of query: 301
length of database: 114,650
effective HSP length: 56
effective length of query: 245
effective length of database: 96,898
effective search space: 23740010
effective search space used: 23740010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
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