Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002238-TA|BGIBMGA002238-PA|IPR007087|Zinc finger,
C2H2-type
(301 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 73 1e-14
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.030
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 29 0.16
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 29 0.16
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.28
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 24 6.0
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 72.5 bits (170), Expect = 1e-14
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 185 RKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIH 244
R + +KC C+ +LK HIR HTGE+P++C +C + +LTRH RIH
Sbjct: 205 RHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCP--HCTYASPDKFKLTRHMRIH 262
Query: 245 SGVRPFPCATCGKKFGRRDHLKKHTRTHFV 274
+G +P+ C C +F + + LK H H V
Sbjct: 263 TGEKPYSCDVCFARFTQSNSLKAHKMIHQV 292
Score = 71.3 bits (167), Expect = 3e-14
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 166 ELEYARILQQENEAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEK 225
E +YA + + + + ++P ++CPHC + +L H+RIHTGE+PY CD
Sbjct: 216 ECDYASVELSKLKRHIRTHTGEKP--FQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDV- 272
Query: 226 NCGKSFTRNEELTRHKRIHS-GVRP-FPCATCGKKFGRRDHLKKHTR 270
C FT++ L HK IH G +P F C C GR+ L+ H +
Sbjct: 273 -CFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQ 318
Score = 67.7 bits (158), Expect = 4e-13
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRI-HSGVR 248
+ +KC C GF L+ H+ HTG +P++C K+C FT + EL RH R H+ R
Sbjct: 153 RPHKCVVCERGFKTLASLQNHVNTHTGTKPHRC--KHCDNCFTTSGELIRHIRYRHTHER 210
Query: 249 PFPCATCGKKFGRRDHLKKHTRTH 272
P C C LK+H RTH
Sbjct: 211 PHKCTECDYASVELSKLKRHIRTH 234
Score = 56.0 bits (129), Expect = 1e-09
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 182 MNARKQRPKK-YKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRH 240
M+A+ +K Y+C +C + L+ H+ +HT ++PYKCD+ C ++F + + L RH
Sbjct: 344 MHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQ--CAQTFRQKQLLKRH 401
Query: 241 KRIHSG---VRPFP------CATCGKKFGRRDHLKKHTRTH 272
+ V P P C TC + F + +L +H H
Sbjct: 402 MNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMH 442
Score = 53.6 bits (123), Expect = 7e-09
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 172 ILQQENE-AKLMNARKQRPKK-----YKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEK 225
I+Q+E E AK R +R ++ Y C +CN + L H++ H+ +RP+KC
Sbjct: 101 IVQEEQEPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKC--V 158
Query: 226 NCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTR 270
C + F L H H+G +P C C F L +H R
Sbjct: 159 VCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIR 203
Score = 52.0 bits (119), Expect = 2e-08
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRP 249
K KC C+ F + K H + H GE+ Y+C+ C + L H +H+ +P
Sbjct: 325 KPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCE--YCPYASISMRHLESHLLLHTDQKP 382
Query: 250 FPCATCGKKFGRRDHLKKH 268
+ C C + F ++ LK+H
Sbjct: 383 YKCDQCAQTFRQKQLLKRH 401
Score = 50.0 bits (114), Expect = 8e-08
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 190 KKYKCPHCNVGFSNNGQLKGHIRIH-TGERP-YKCDEKNCGKSFTRNEELTRH-KRIHSG 246
K Y C C F+ + LK H IH G +P ++C K C + R +L H + +H+
Sbjct: 266 KPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC--KLCPTTCGRKTDLRIHVQNLHTA 323
Query: 247 VRPFPCATCGKKFGRRDHLKKHTRTH 272
+P C C F R K H +TH
Sbjct: 324 DKPIKCKRCDSTFPDRYSYKMHAKTH 349
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 163 YAMELEYARILQQEN-EAKLMNARKQRPKKYKCPHCNVGFSNNGQLKGHIR-IHTGERPY 220
Y+ ++ +AR Q + +A M + ++C C L+ H++ +HT ++P
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPI 327
Query: 221 KCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
KC K C +F H + H G + + C C HL+ H H
Sbjct: 328 KC--KRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLH 377
Score = 33.9 bits (74), Expect = 0.006
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 237 LTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTRTH 272
L+RH + HS RP C C + F L+ H TH
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTH 177
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.030
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 240 HKRIHSGVRPFPCATCGKKFGRRDHLKKHTR 270
H IH + C CG+KF RRD++K H +
Sbjct: 914 HANIHRP-QSHECPVCGQKFTRRDNMKAHCK 943
Score = 30.3 bits (65), Expect = 0.070
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 189 PKKYKCPHCNVGFSNNGQLKGHIRIHTGERPYKCDEKNCGKSFTRNEELTRHKRI 243
P Y C C+ SN H IH RP + CG+ FTR + + H ++
Sbjct: 896 PTLYSCVSCHKTVSNRWH---HANIH---RPQSHECPVCGQKFTRRDNMKAHCKV 944
Score = 28.7 bits (61), Expect = 0.21
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 183 NARKQRPKKYKCPHCNVGFSNNGQLKGHIRI 213
+A RP+ ++CP C F+ +K H ++
Sbjct: 914 HANIHRPQSHECPVCGQKFTRRDNMKAHCKV 944
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 29.1 bits (62), Expect = 0.16
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 189 PKKYKCPHCNVGFSNNGQLKGHIRIHTGER 218
P++ CP+C +S L+ H+RI +R
Sbjct: 548 PQRSLCPYCPASYSRIDTLRSHLRIKHADR 577
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 29.1 bits (62), Expect = 0.16
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 189 PKKYKCPHCNVGFSNNGQLKGHIRIHTGER 218
P++ CP+C +S L+ H+RI +R
Sbjct: 524 PQRSLCPYCPASYSRIDTLRSHLRIKHADR 553
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 28.3 bits (60), Expect = 0.28
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 212 RIHTGERPYKCDEKNCGKSFTRNEELTRHKRIHSGVRPFPCATCGKKFGRRDHLKKHTR 270
R+ G ++C K CGK T + H +H R F C C + R D+L+ H +
Sbjct: 492 RLSGGCNLHRC--KLCGKVVTH---IRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCK 544
Score = 23.4 bits (48), Expect = 8.0
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 189 PKKYKCPHCNVGFSNNGQLKGHIR 212
P +++CP C ++ + L+ H +
Sbjct: 521 PGRFECPLCRATYTRSDNLRTHCK 544
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.8 bits (49), Expect = 6.0
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 50 IYKRDINQDATVSTTTADEDVNKPVDAESPVTSLSLCCDRLLQDPQKIEVRKKESPHS 107
+ K D++ AT STT+ + T+ + + + + Q +E++ +P S
Sbjct: 133 VAKHDLSMGATTSTTSTTATTTTTTTTTTTTTTTTTTPNPVGESDQILEIQASTTPVS 190
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.318 0.133 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,309
Number of Sequences: 2123
Number of extensions: 12381
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 17
length of query: 301
length of database: 516,269
effective HSP length: 64
effective length of query: 237
effective length of database: 380,397
effective search space: 90154089
effective search space used: 90154089
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)
- SilkBase 1999-2023 -