Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002236-TA|BGIBMGA002236-PA|undefined
(581 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002764-1|AAH02764.2| 528|Homo sapiens Wolf-Hirschhorn syndrom... 219 3e-56
AL132868-2|CAM15219.1| 539|Homo sapiens Wolf-Hirschhorn syndrom... 219 3e-56
AK222853-1|BAD96573.1| 528|Homo sapiens Wolf-Hirschhorn syndrom... 219 3e-56
AF101434-1|AAC72982.1| 525|Homo sapiens Wolf-Hirschhorn syndrom... 215 5e-55
AB044549-1|BAB18651.1| 549|Homo sapiens Wolf-Hirshhorn syndrome... 193 2e-48
AF131751-1|AAD20034.1| 265|Homo sapiens human Wolf-Hirschhorn s... 128 4e-29
D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein. 33 2.8
BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein. 33 2.8
BC117681-1|AAI17682.1| 1855|Homo sapiens GBF1 protein protein. 33 2.8
BC014171-1|AAH14171.2| 548|Homo sapiens GBF1 protein protein. 33 2.8
BC007941-1|AAH07941.2| 297|Homo sapiens GBF1 protein protein. 33 2.8
AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldi... 33 2.8
AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldi... 33 2.8
AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldi... 33 2.8
AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family memb... 33 2.8
Z85999-4|CAI43172.1| 454|Homo sapiens golgi associated PDZ and ... 31 8.5
BC009553-1|AAH09553.1| 454|Homo sapiens golgi associated PDZ an... 31 8.5
AY033606-1|AAK57733.1| 454|Homo sapiens fused in glioblastoma p... 31 8.5
AL589939-1|CAH70198.1| 454|Homo sapiens golgi associated PDZ an... 31 8.5
AF450008-1|AAL47160.1| 454|Homo sapiens CFTR-associated ligand ... 31 8.5
>BC002764-1|AAH02764.2| 528|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein.
Length = 528
Score = 219 bits (534), Expect = 3e-56
Identities = 121/279 (43%), Positives = 162/279 (58%), Gaps = 18/279 (6%)
Query: 1 MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF 60
MA++R+SD LWLHNKLG +++ W SI S L A V+ NI+ CF L VKLKLLL
Sbjct: 1 MASMRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLCFHGLSSAVKLKLLLGT 60
Query: 61 FHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF 120
H+PRR V +A++DSD WV M+A++LK++P G+LN E+ +E P
Sbjct: 61 LHLPRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKSFPDTGSLNLEL---EEQNPNV 117
Query: 121 SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE 180
D++GELR + + +LPLEC YLNKNAL ++ G T P+KHF LKRKPKSA+LR+E
Sbjct: 118 QDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLTPPVKHFQLKRKPKSATLRAE 177
Query: 181 LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPS---LXXXXXXXXXXXTGW 237
LL K+TE K++ + RG+ RKM TTPLKG+P TG
Sbjct: 178 LLQKSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIPKQAPFRSPTAPSVFSPTGN 237
Query: 238 RSQRP----------GIKLLDIA--DQPATHAQIKKRRK 264
R+ P G+KLLDI+ D + K+RRK
Sbjct: 238 RTPIPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK 276
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 427 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 486
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 487 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 524
>AL132868-2|CAM15219.1| 539|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein.
Length = 539
Score = 219 bits (534), Expect = 3e-56
Identities = 121/279 (43%), Positives = 162/279 (58%), Gaps = 18/279 (6%)
Query: 1 MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF 60
MA++R+SD LWLHNKLG +++ W SI S L A V+ NI+ CF L VKLKLLL
Sbjct: 12 MASMRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLCFHGLSSAVKLKLLLGT 71
Query: 61 FHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF 120
H+PRR V +A++DSD WV M+A++LK++P G+LN E+ +E P
Sbjct: 72 LHLPRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKSFPDTGSLNLEL---EEQNPNV 128
Query: 121 SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE 180
D++GELR + + +LPLEC YLNKNAL ++ G T P+KHF LKRKPKSA+LR+E
Sbjct: 129 QDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLTPPVKHFQLKRKPKSATLRAE 188
Query: 181 LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPS---LXXXXXXXXXXXTGW 237
LL K+TE K++ + RG+ RKM TTPLKG+P TG
Sbjct: 189 LLQKSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIPKQAPFRSPTAPSVFSPTGN 248
Query: 238 RSQRP----------GIKLLDIA--DQPATHAQIKKRRK 264
R+ P G+KLLDI+ D + K+RRK
Sbjct: 249 RTPIPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK 287
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 438 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 497
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 498 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 535
>AK222853-1|BAD96573.1| 528|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein variant protein.
Length = 528
Score = 219 bits (534), Expect = 3e-56
Identities = 121/279 (43%), Positives = 162/279 (58%), Gaps = 18/279 (6%)
Query: 1 MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF 60
MA++R+SD LWLHNKLG +++ W SI S L A V+ NI+ CF L VKLKLLL
Sbjct: 1 MASMRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLCFHGLSSAVKLKLLLGT 60
Query: 61 FHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF 120
H+PRR V +A++DSD WV M+A++LK++P G+LN E+ +E P
Sbjct: 61 LHLPRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKSFPDTGSLNLEL---EEQNPNV 117
Query: 121 SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE 180
D++GELR + + +LPLEC YLNKNAL ++ G T P+KHF LKRKPKSA+LR+E
Sbjct: 118 QDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPLTPPVKHFQLKRKPKSATLRAE 177
Query: 181 LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPS---LXXXXXXXXXXXTGW 237
LL K+TE K++ + RG+ RKM TTPLKG+P TG
Sbjct: 178 LLQKSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIPKQAPFRSPTAPSVFSPTGN 237
Query: 238 RSQRP----------GIKLLDIA--DQPATHAQIKKRRK 264
R+ P G+KLLDI+ D + K+RRK
Sbjct: 238 RTPIPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK 276
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 427 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 486
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 487 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 524
>AF101434-1|AAC72982.1| 525|Homo sapiens Wolf-Hirschhorn syndrome
candidate 2 protein protein.
Length = 525
Score = 215 bits (524), Expect = 5e-55
Identities = 119/276 (43%), Positives = 159/276 (57%), Gaps = 18/276 (6%)
Query: 4 VRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHI 63
+R+SD LWLHNKLG +++ W SI S L A V+ NI+ CF L VKLKLLL H+
Sbjct: 1 MRESDTGLWLHNKLGATDELWAPPSIASLLTAAVIDNIRLCFHGLSSAVKLKLLLGTLHL 60
Query: 64 PRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIFSDM 123
PRR V +A++DSD WV M+A++LK++P G+LN E+ +E P D+
Sbjct: 61 PRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKSFPDTGSLNLEL---EEQNPNVQDI 117
Query: 124 IGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSELLA 183
+GELR + + +LPLEC YLNKNAL ++ G T P+KHF LKRKPKSA+LR+ELL
Sbjct: 118 LGELREKVGECEASAMLPLECQYLNKNALTTLAGPLTPPVKHFQLKRKPKSATLRAELLQ 177
Query: 184 KATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPS---LXXXXXXXXXXXTGWRSQ 240
K+TE K++ + RG+ RKM TTPLKG+P TG R+
Sbjct: 178 KSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKGIPKQAPFRSPTAPSVFSPTGNRTP 237
Query: 241 RP----------GIKLLDIA--DQPATHAQIKKRRK 264
P G+KLLDI+ D + K+RRK
Sbjct: 238 IPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK 273
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 424 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 483
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 484 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 521
>AB044549-1|BAB18651.1| 549|Homo sapiens Wolf-Hirshhorn syndrome
candidate 2 protein protein.
Length = 549
Score = 193 bits (470), Expect = 2e-48
Identities = 120/300 (40%), Positives = 162/300 (54%), Gaps = 39/300 (13%)
Query: 1 MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIK-----------------D 43
MA++R+SD LWLHNKLG +++ SI S L A ++ NI+ D
Sbjct: 1 MASMRESDTGLWLHNKLGATDELXAPPSIASLLTAAIIDNIRLCFHGLSSASLLTAAVID 60
Query: 44 ----CFPELQPQVKLKLLLSFFHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKT 99
CF L VKLKLLL H+PRR V +A++DSD WV M+A++LK+
Sbjct: 61 NIRLCFHGLSSAVKLKLLLGTLHLPRRTVDEMKGALMEIIQLASLDSDPWVLMVADILKS 120
Query: 100 YPSAGTLNTEIAEFDETRPIFSDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQ 159
+P G+LN E+ +E P D++GELR + + +LPLEC YLNKNAL ++ G
Sbjct: 121 FPDTGSLNLEL---EEQNPNVQDILGELREKVGECEASAMLPLECQYLNKNALTTLAGPL 177
Query: 160 TNPIKHFTLKRKPKSASLRSELLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKG 219
T P+KHF LKRKPKSA+LR+ELL K+TE K++ + RG+ RKM TTPLKG
Sbjct: 178 TPPVKHFQLKRKPKSATLRAELLQKSTETAQQLKRSAGVPFHAKGRGLLRKMDTTTPLKG 237
Query: 220 LPS---LXXXXXXXXXXXTGWRSQRP----------GIKLLDIA--DQPATHAQIKKRRK 264
+P TG R+ P G+KLLDI+ D + K+RRK
Sbjct: 238 IPKQAPFRSPTAPSVFSPTGNRTPIPPSRTLLRKERGVKLLDISELDMVGAGREAKRRRK 297
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 448 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 507
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 508 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 545
>AF131751-1|AAD20034.1| 265|Homo sapiens human Wolf-Hirschhorn
syndrome candidate 2 protein protein.
Length = 265
Score = 128 bits (310), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Query: 453 PRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENI 512
P++ LSLTREQM AQ+MF+ AN+VTRPEKALILGFMAGSR+NPC G+++ IKLSE+
Sbjct: 164 PKKNLSLTREQMFAAQEMFKTANKVTRPEKALILGFMAGSRENPCQEQGDVIQIKLSEHT 223
Query: 513 ENVLQSD-DTYLTMLSEMHFQMNYNNGQWTRLKKYRPI 549
E++ ++D TML + F+MNY GQWTR KKY+P+
Sbjct: 224 EDLPKADGQGSTTMLVDTVFEMNYATGQWTRFKKYKPM 261
>D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein.
Length = 1880
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1819 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1856
>BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein.
Length = 1855
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1794 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1831
>BC117681-1|AAI17682.1| 1855|Homo sapiens GBF1 protein protein.
Length = 1855
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1794 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1831
>BC014171-1|AAH14171.2| 548|Homo sapiens GBF1 protein protein.
Length = 548
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 487 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 524
>BC007941-1|AAH07941.2| 297|Homo sapiens GBF1 protein protein.
Length = 297
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 236 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 273
>AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1798 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1835
>AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1798 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1835
>AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1798 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1835
>AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family member
protein.
Length = 1859
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 340 DGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAV 379
DGPPPLA P L+ P L + G P+ +P +LN + +
Sbjct: 1798 DGPPPLAQPPLILQPLASPLQV--GVPPMTLPIILNPALI 1835
>Z85999-4|CAI43172.1| 454|Homo sapiens golgi associated PDZ and
coiled-coil motif containing protein.
Length = 454
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 9 ISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNV 68
I L LH K G S DS G+I ++L E+ N K+ E Q + ++KLL RR++
Sbjct: 129 IQLQLHAKTGQSADS---GTIKAKLERELEANKKEKMKEAQLEAEVKLLRKENEALRRHI 185
>BC009553-1|AAH09553.1| 454|Homo sapiens golgi associated PDZ and
coiled-coil motif containing protein.
Length = 454
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 9 ISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNV 68
I L LH K G S DS G+I ++L E+ N K+ E Q + ++KLL RR++
Sbjct: 129 IQLQLHAKTGQSADS---GTIKAKLERELEANKKEKMKEAQLEAEVKLLRKENEALRRHI 185
>AY033606-1|AAK57733.1| 454|Homo sapiens fused in glioblastoma
protein.
Length = 454
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 9 ISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNV 68
I L LH K G S DS G+I ++L E+ N K+ E Q + ++KLL RR++
Sbjct: 129 IQLQLHAKTGQSADS---GTIKAKLERELEANKKEKMKEAQLEAEVKLLRKENEALRRHI 185
>AL589939-1|CAH70198.1| 454|Homo sapiens golgi associated PDZ and
coiled-coil motif containing protein.
Length = 454
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 9 ISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNV 68
I L LH K G S DS G+I ++L E+ N K+ E Q + ++KLL RR++
Sbjct: 129 IQLQLHAKTGQSADS---GTIKAKLERELEANKKEKMKEAQLEAEVKLLRKENEALRRHI 185
>AF450008-1|AAL47160.1| 454|Homo sapiens CFTR-associated ligand
protein.
Length = 454
Score = 31.5 bits (68), Expect = 8.5
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 9 ISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNV 68
I L LH K G S DS G+I ++L E+ N K+ E Q + ++KLL RR++
Sbjct: 129 IQLQLHAKTGQSADS---GTIKAKLERELEANKKEKMKEAQLEAEVKLLRKENEALRRHI 185
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,612,416
Number of Sequences: 224733
Number of extensions: 2455149
Number of successful extensions: 6720
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6690
Number of HSP's gapped (non-prelim): 33
length of query: 581
length of database: 73,234,838
effective HSP length: 94
effective length of query: 487
effective length of database: 52,109,936
effective search space: 25377538832
effective search space used: 25377538832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 68 (31.5 bits)
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