GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002236-TA|BGIBMGA002236-PA|undefined
         (581 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p pro...   360   3e-99
AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA...   360   3e-99

>BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p
           protein.
          Length = 1248

 Score =  360 bits (886), Expect = 3e-99
 Identities = 175/286 (61%), Positives = 214/286 (74%), Gaps = 13/286 (4%)

Query: 1   MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF 60
           MANVRDSD SLWLHNKLGTSNDSW +GSICSQLN EVL+NIK+CFP+LQ QVKLKLLLSF
Sbjct: 1   MANVRDSDTSLWLHNKLGTSNDSWINGSICSQLNKEVLRNIKECFPDLQTQVKLKLLLSF 60

Query: 61  FHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF 120
            HIPRR V            VA +DS+LWV+MLAE +KT+P+  +LNTEI+++++TRPIF
Sbjct: 61  LHIPRRLVEEWKAELEEVIEVAGLDSELWVSMLAETMKTFPATSSLNTEISDYEDTRPIF 120

Query: 121 SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE 180
            DM+ +LR+ + KHSDLG+LPLEC YLNKNAL+SVVGQQ  P+KHFTLKRKPKSA LR+E
Sbjct: 121 IDMVNDLRKLVTKHSDLGMLPLECQYLNKNALISVVGQQPAPVKHFTLKRKPKSAQLRTE 180

Query: 181 LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPSLXXXXXXXXXXXTGWRSQ 240
           LL K+ + Q++ KKA APT+P+RSRGMPRKMTDTTPLKG+PS             G  +Q
Sbjct: 181 LLHKSADAQSSLKKASAPTIPLRSRGMPRKMTDTTPLKGIPSRMPTTGFRSATVPGNAAQ 240

Query: 241 RP------------GIKLLDIADQPATHAQIKKR-RKLEMEEGAKK 273
           RP            GIKL++  +QP  +A  KKR R+ ++EE  KK
Sbjct: 241 RPNLSRTPAGRKDGGIKLIEFTEQPLGYAAAKKRKREQQLEEQQKK 286



 Score =  105 bits (251), Expect = 2e-22
 Identities = 49/94 (52%), Positives = 64/94 (68%)

Query: 454  RRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENIE 513
            RRGLSL+ E + +A +MFR ANRV+RP+KALILGFMAG R+NP PN  N++ IKL E  E
Sbjct: 1147 RRGLSLSNEHVHKAHEMFRKANRVSRPDKALILGFMAGLRENPRPNNENVLVIKLGETEE 1206

Query: 514  NVLQSDDTYLTMLSEMHFQMNYNNGQWTRLKKYR 547
             V Q +      L E H +++YN G+W   + YR
Sbjct: 1207 KVQQDNGHTALCLVESHIRLDYNTGEWKTFQNYR 1240


>AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA
           protein.
          Length = 1251

 Score =  360 bits (886), Expect = 3e-99
 Identities = 175/286 (61%), Positives = 214/286 (74%), Gaps = 13/286 (4%)

Query: 1   MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSF 60
           MANVRDSD SLWLHNKLGTSNDSW +GSICSQLN EVL+NIK+CFP+LQ QVKLKLLLSF
Sbjct: 1   MANVRDSDTSLWLHNKLGTSNDSWINGSICSQLNKEVLRNIKECFPDLQTQVKLKLLLSF 60

Query: 61  FHIPRRNVXXXXXXXXXXXXVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIF 120
            HIPRR V            VA +DS+LWV+MLAE +KT+P+  +LNTEI+++++TRPIF
Sbjct: 61  LHIPRRLVEEWKAELEEVIEVAGLDSELWVSMLAETMKTFPATSSLNTEISDYEDTRPIF 120

Query: 121 SDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSE 180
            DM+ +LR+ + KHSDLG+LPLEC YLNKNAL+SVVGQQ  P+KHFTLKRKPKSA LR+E
Sbjct: 121 IDMVNDLRKLVTKHSDLGMLPLECQYLNKNALISVVGQQPAPVKHFTLKRKPKSAQLRTE 180

Query: 181 LLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPSLXXXXXXXXXXXTGWRSQ 240
           LL K+ + Q++ KKA APT+P+RSRGMPRKMTDTTPLKG+PS             G  +Q
Sbjct: 181 LLHKSADAQSSLKKASAPTIPLRSRGMPRKMTDTTPLKGIPSRMPTTGFRSATVPGNAAQ 240

Query: 241 RP------------GIKLLDIADQPATHAQIKKR-RKLEMEEGAKK 273
           RP            GIKL++  +QP  +A  KKR R+ ++EE  KK
Sbjct: 241 RPNLSRTPAGRKDGGIKLIEFTEQPLGYAAAKKRKREQQLEEQQKK 286



 Score =  105 bits (251), Expect = 2e-22
 Identities = 49/94 (52%), Positives = 64/94 (68%)

Query: 454  RRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENIE 513
            RRGLSL+ E + +A +MFR ANRV+RP+KALILGFMAG R+NP PN  N++ IKL E  E
Sbjct: 1150 RRGLSLSNEHVHKAHEMFRKANRVSRPDKALILGFMAGLRENPRPNNENVLVIKLGETEE 1209

Query: 514  NVLQSDDTYLTMLSEMHFQMNYNNGQWTRLKKYR 547
             V Q +      L E H +++YN G+W   + YR
Sbjct: 1210 KVQQDNGHTALCLVESHIRLDYNTGEWKTFQNYR 1243


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,892,330
Number of Sequences: 52641
Number of extensions: 842905
Number of successful extensions: 2278
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2270
Number of HSP's gapped (non-prelim): 6
length of query: 581
length of database: 24,830,863
effective HSP length: 89
effective length of query: 492
effective length of database: 20,145,814
effective search space: 9911740488
effective search space used: 9911740488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)