GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002235-TA|BGIBMGA002235-PA|IPR011496|Hyaluronidase
eukaryotic/prokaryotic
         (857 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   3.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   3.6  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 363 LSPTRAVPEPGIEPLDVDPPSNTGTDPDVVMTDGLSENGSMQVEASNSPLSSD 415
           LS  R V E G+E   + PPS        ++TD LSE  + ++ A+ + L  D
Sbjct: 310 LSTNRKVYEFGLEHEGLKPPSQIILSTIFLVTDVLSEFYNRRIAANANGLFYD 362


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 363 LSPTRAVPEPGIEPLDVDPPSNTGTDPDVVMTDGLSENGSMQVEASNSPLSSD 415
           LS  R V E G+E   + PPS        ++TD LSE  + ++ A+ + L  D
Sbjct: 310 LSTNRKVYEFGLEHEGLKPPSQIILSTIFLVTDVLSEFYNRRIAANANGLFYD 362


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,169
Number of Sequences: 2123
Number of extensions: 28901
Number of successful extensions: 55
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 2
length of query: 857
length of database: 516,269
effective HSP length: 70
effective length of query: 787
effective length of database: 367,659
effective search space: 289347633
effective search space used: 289347633
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)