Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002234-TA|BGIBMGA002234-PA|IPR007087|Zinc finger,
C2H2-type
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 87 6e-18
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 71 4e-13
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 64 4e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 63 6e-11
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 57 4e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 55 2e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 54 3e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 50 8e-07
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 46 1e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 45 2e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 3e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.004
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 31 0.41
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 31 0.41
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 31 0.41
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.41
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 29 0.95
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 29 0.95
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 29 1.7
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 28 2.2
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 28 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.9
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 3.8
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 27 3.8
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 27 3.8
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 27 5.1
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 5.1
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 6.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 8.9
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 26 8.9
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 26 8.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 86.6 bits (205), Expect = 6e-18
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCG--DCNKSFSQAANLTAHVRTHTGQKPFRCR--S 398
CGK Y+RPS L+ HLRTHS ERP+ C C+K+F + ++L H R HT KPF C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 399 CKKAFSDSSTLTKHLRIHSGEKPYQC 424
C F L +H+ +H KPY C
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYAC 115
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 365 PYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIHSGEKPY 422
PY +C K +S+ + L H+RTH+ ++PF C C KAF S L H R H+ KP+
Sbjct: 26 PYE--ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPF 83
Query: 423 QC 424
C
Sbjct: 84 SC 85
Score = 47.2 bits (107), Expect = 4e-06
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 351 STLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTG----QKPFRC--RSCKKAFS 404
S L+ H+R P C C + F AA+L HV H +K + C CKK+F+
Sbjct: 192 SQLQNHIR--EAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFT 248
Query: 405 DSSTLTKHLR-IHSGEKPYQCKLC 427
SS L KH+ IH G + C C
Sbjct: 249 RSSALKKHISVIHEGNMAFHCDSC 272
Score = 46.8 bits (106), Expect = 6e-06
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 340 CRICGKTYARPSTLKTHLRTHSG----ERPYRCG--DCNKSFSQAANLTAHVRT-HTGQK 392
C ICG+ + + L+ H+ H + Y C C KSF++++ L H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 393 PFRCRSCKKAFSDSSTLTKHLR---IHSGEKPY 422
F C SC F L +HL KPY
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY 298
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 70.5 bits (165), Expect = 4e-13
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 330 SEDDEQKPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRT 387
SE Q +C C K + R LK+H+ TH+ RP++C C KSF++ + H +
Sbjct: 562 SESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
Query: 388 HTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGE 419
HTG K F C +C + F+ L +H + G+
Sbjct: 622 HTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
Score = 68.1 bits (159), Expect = 2e-12
Identities = 68/252 (26%), Positives = 101/252 (40%), Gaps = 39/252 (15%)
Query: 193 NQNPSTPSVNVVYPQTQSMISPNSYPSATYSFTADFRPPNQSDPLITASSTFKPILQNPQ 252
N TP +NVV S S P+ P Q+D IT S + P+ P
Sbjct: 404 NNFSGTPQINVVPSSPSKSQSGPSLPA---------NPLLQTDISITYSQSASPVSGQPA 454
Query: 253 KTNHNYAIFQQKQNFANQKSLAMKRSPSKIYMQEGHKDQGAGGGFIMNHQTSMHPQDYDY 312
++Y + N A + SP+ Y H+ AG F + +
Sbjct: 455 MNENSY-------DLQNANLCAPEMSPT--YTAR-HRSNSAGSRFDAYEPIPQLYTHFSH 504
Query: 313 SA-CVSAGKVQVGALSGCSEDDEQKPN--------------LCRICGKTYARPSTLKTHL 357
S+ C+S Q L G E+D K N L + G S+ K
Sbjct: 505 SSECLSVN--QDTELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSSSSKAKS 562
Query: 358 RTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRI 415
+ S + Y C CNK F++A NL +H+ THT +PF+C CKK+F+ +H ++
Sbjct: 563 ESKS-QGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
Query: 416 HSGEKPYQCKLC 427
H+G K + C C
Sbjct: 622 HTGIKAFACVTC 633
Score = 46.8 bits (106), Expect = 6e-06
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFR 395
+P C IC K++AR + H + H+G + + C CN+ F++ L H ++ GQ R
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLR 657
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 64.1 bits (149), Expect = 4e-11
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 364 RPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR--SCKKAFSDSSTLTKHLRIHS 417
RPY+C C K+F + + T H+RTHTG+KP C C K FS S LT+H RIH+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 333 DEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTG 390
D +P C +C K + R H+RTH+GE+P+ C C K FS++ LT H R HT
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Query: 391 QKPFRCRSCKKAFSDSS 407
R + A ++S+
Sbjct: 81 ANSRRNAAAAAAANNSA 97
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 392 KPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+P++C C KAF T+H+R H+GEKP+ C
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC 56
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 63.3 bits (147), Expect = 6e-11
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 334 EQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQ 391
+Q +CRI P T+ + + Y C CNK ++ N+ +H++TH
Sbjct: 417 KQSTRICRI------PPETMASLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSD 470
Query: 392 KPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLR 430
+P+RC CK F L +HLRIH +PY C+ CL R
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 57.2 bits (132), Expect = 4e-09
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 349 RPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRT-HTGQKPFRCRSCKKAFSDSS 407
+PS KT + G + + C +C+K F ++ +L H+R+ HT +KPF C C K FS
Sbjct: 406 QPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRD 464
Query: 408 TLTKHLRIHSGEKP 421
L +H R+H P
Sbjct: 465 NLRQHERLHVNASP 478
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRT-HSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
K +C C K + R L+ H+R+ H+ E+P+ C C K FS+ NL H R H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 30.3 bits (65), Expect = 0.54
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 335 QKPNLCRICGKTYARPSTLKTHLRTHSGERP 365
+KP +C ICGK ++R L+ H R H P
Sbjct: 449 EKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 366 YRCGDCNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIH 416
YRC +C + FS+ ++L H +HTG++PF C C KAF+ S + +H RIH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 50.4 bits (115), Expect = 5e-07
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTH 388
C C + ++RPS+LK H +H+GERP+ C C K+F+ +N+ H R H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.5 bits (78), Expect = 0.014
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 394 FRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+RC C + FS S+L H H+GE+P+ C
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVC 498
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 54.4 bits (125), Expect = 3e-08
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 364 RPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR--SCKKAFSDSSTLTKHLRIH 416
+ Y C C + F + + H+R+HTG+KPF C SCKK F+ L +H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 47.6 bits (108), Expect = 3e-06
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCG--DCNKSFSQAANLTAHVRTH 388
C C + + R H+R+H+GE+P+ C C K F++ L HVRTH
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 39.5 bits (88), Expect = 9e-04
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 392 KPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
K + C CK+ F +H+R H+GEKP++C
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFEC 34
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 353 LKTHLRTHS-GERPYRCG--DCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTL 409
LK R H G+ + C DC KSF++ +L H RTH K F C C +AF+ S L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 410 TKHLR 414
+H++
Sbjct: 72 NRHVQ 76
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQK 392
C K++ R L+ H RTH + + C CN++F+++ L HV+ QK
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 373 KSFSQAANLTAHVRTHT-GQKPFRCR--SCKKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+SF++ L R H G F C C K+F+ L +H R H K + C C
Sbjct: 5 ESFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFC 61
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 360 HSGER--PYRC--GDC-NKSFSQAAN--LTAHVRTHTGQKPFRCR--SCKKAFSDSSTLT 410
H G R Y C DC K Q + L AH+R+HTG+KPF C C ++F+ S L
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 411 KHLR-IHSGE 419
KH+R +H +
Sbjct: 125 KHMRTVHEAD 134
Score = 40.3 bits (90), Expect = 5e-04
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 353 LKTHLRTHSGERPYRCG--DCNKSFSQAANLTAHVRT 387
L HLR+H+GE+P+ C +C++SF+++ L H+RT
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 409 LTKHLRIHSGEKPYQCKL 426
L HLR H+GEKP+ C +
Sbjct: 93 LVAHLRSHTGEKPFICSV 110
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 362 GERPYRCG--DCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHL 413
G+ Y+C C KSF++ + H R+HT K F C C +F+ S L +H+
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 36.7 bits (81), Expect = 0.006
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHV 385
C K++ R + H R+H+ + + C C+ SF+++ L HV
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 390 GQKPFRC--RSCKKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
G ++C + C K+F+ +H R H+ K + C C
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHC 52
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 364 RPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC-------RSCKKAFSDSSTLTKH-LRI 415
+ Y C C ++F++ +L H+R+HT +KPF C C + FS L +H +I
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 416 HSGEKP 421
H +P
Sbjct: 128 HRNPQP 133
Score = 44.0 bits (99), Expect = 4e-05
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGD-------CNKSFSQAANLTAH-VRT 387
K +C C + +AR LK H+R+H+ E+P+ C + C + FS+ L H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 388 HTGQKPFRCRSCKKAFSDSS 407
H +P R R A + S
Sbjct: 128 HRNPQPRRRRRSTTALPNPS 147
Score = 37.9 bits (84), Expect = 0.003
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 392 KPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
K + C +C +AF+ L +H+R H+ EKP+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 363 ERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHL-RIHS 417
+R + C C K F++ NLT H H+ +P C C+ L +H+ R H+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 34.3 bits (75), Expect = 0.033
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 391 QKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLR 430
++ F C C K F+ LT+H HS +P C C ++
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIK 67
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/60 (25%), Positives = 21/60 (35%)
Query: 333 DEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQK 392
D ++ C C K + R L H HS P C C + L H++ K
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 30.7 bits (66), Expect = 0.41
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 3 CYMPNNPQYEAGECCGGGLCYDPLQPCH----CQQPREDQCC 40
CY ++A EC G +CY+ Q H C +P++++ C
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTC 60
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 1 MECYMPNNPQYEAGECCGGGLCYDPLQPCH----CQQPREDQCCQQENE 45
M CY + ++A +C G CY + H CQQ + Q C + N+
Sbjct: 116 MNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFECQQASDGQLCYKCNQ 164
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 195 NPSTPSVNVVYPQ--TQSMISPNSYPSATYSFTADFRPPNQSDPLITASSTFKPILQNPQ 252
+P S+++V P + S N+ S + F +DFR +++ L S T PI++N +
Sbjct: 336 SPRRKSISIVKPHGISSPKHSTNNLSSKSGKFHSDFRVVSENVLLQARSETNSPIIENKE 395
Query: 253 KTN 255
N
Sbjct: 396 ANN 398
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 30.7 bits (66), Expect = 0.41
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 160 GGAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVNVVYPQTQ-------SMI 212
GG PL+PT S++ + P +++ NPS + + P+ S+
Sbjct: 116 GGQPLYPTNFFTTSVSASSDSFPNSPTVPS-KFSLNPSVATSTNISPRRHAKSHSVASVS 174
Query: 213 SPNSYPSATYSFTADFRPPNQSDPLITASSTFKPILQ 249
SPNS+ + ++ A P N + PL A +T +L+
Sbjct: 175 SPNSHNAVPFTPHAFVPPVNNASPL-PALNTLPQLLR 210
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 30.7 bits (66), Expect = 0.41
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 334 EQKPNLCRICGKTYARPSTLKTHLRTHS 361
E KP C +C K Y + LK H RTHS
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 29.9 bits (64), Expect = 0.72
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
Query: 336 KPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
KP C + C K Y + LK H + H G C+ + H KP
Sbjct: 348 KPYKCPVPNCDKAYKNQNGLKYH-KLH--------GHCSPITTPTPAPIPHQGFVVENKP 398
Query: 394 FRCRSCKKAFSDSSTLTKHLRIHS 417
+RC C K + + + L H R HS
Sbjct: 399 YRCEVCSKRYKNLNGLKYH-RTHS 421
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 29.5 bits (63), Expect = 0.95
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 3/131 (2%)
Query: 143 PQVMVNSNGGYPYYEHYGGAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVN 202
P+ + S YP +H PL S N S N ++ V NQ P
Sbjct: 584 PENVNASEESYPNVKHISKLPLINDSSDNESGNQENDDAVANESTKVVVDNQQPQPKIST 643
Query: 203 VVYPQTQSMISPNSYPS-ATYSFTADFRPPNQSDPLITASSTFKPILQNPQKTNHNYAIF 261
V SM N+ S + S D +P ++ P ++ KPI+ T +
Sbjct: 644 VSDTAVPSMSFANNISSRSVISAATDSKPSTRTSPPFVNNT--KPIVAKSPVTVTASSET 701
Query: 262 QQKQNFANQKS 272
+K N+K+
Sbjct: 702 NKKSQKINKKA 712
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 29.5 bits (63), Expect = 0.95
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 197 STPSVNVVYPQTQSM--ISPNSYPSA--TYSFTADFRPP-NQSDPLITASS------TFK 245
S PS+++ YP T+S ++P+ SA T SF + P N P+ T + T
Sbjct: 6 SAPSISLGYPPTESSAHLAPSFSDSATSTLSFKSLLEDPVNPIRPVYTPTRTEITPVTLS 65
Query: 246 PILQNPQKTNHNY--AIFQQKQNFANQKSLAMKRSPSKIYMQEGHKDQGAGGGFIMNHQT 303
PI P + Y I Q+ ++ QK +++R K EG + + G ++ +
Sbjct: 66 PIPITPVREFQPYLHEISQEYARYSKQKRASLRRYLEKHGKLEGSMKESSINGSLLRRSS 125
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 194 QNPSTPSVNVVYPQTQSMISPNSYPSATYSFTADFRPPNQSDPLI 238
Q P PS ++ QS+ P+S+ + Y+F A P Q +PLI
Sbjct: 201 QPPLPPSRSISISNPQSLSFPSSFDQSNYNFQAASTP--QFNPLI 243
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 196 PSTPSVNVVYPQTQSMISPNSYPSATYSFTADFRPPNQSDPLITASSTFKPILQNP 251
P TPS + YP + S ISP S P + YS + +Q P T ++T P QNP
Sbjct: 373 PLTPSTSRDYPFSASTISP-STPFSAYSSSHGI---HQRIPASTPTNT-NPADQNP 423
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 2.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 31 CQQPREDQCCQQENEGCC 48
C ++ CC QE +GCC
Sbjct: 247 CCSSKKPSCCSQEKKGCC 264
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 3 CYMPNNPQYEAGECCGGGL--CYDPLQPCHCQQPREDQCCQQENEGCC 48
C ++ E CC C +P C Q ++ CC E CC
Sbjct: 226 CSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKG-CCSTEKTSCC 272
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.9
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 163 PLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVNVVYPQTQSMISPNSYPSATY 222
P P S N S + M + L SQV P+TPS P S S + S +
Sbjct: 244 PTLPPQSTNTSQ-LPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTRSTGTSSSMAH 302
Query: 223 SFTADFRPPNQSD 235
S+ + P + SD
Sbjct: 303 SYDSPPSPSSPSD 315
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 232 NQSDPLITASSTFKPILQNPQKTNHNYAIFQQK--QNFANQKSLAMKRS 278
N D + +S K I PQ+ NH Y I K N N ++ A +R+
Sbjct: 210 NNEDRVEAVTSENKSIDSAPQEKNHEYEIVSPKSLSNKINNQAAAQRRT 258
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 27.5 bits (58), Expect = 3.8
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 147 VNSNGGYPYYEHYGGA----PLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVN 202
VN + + +Y++ A P P M VN S + C D L + ++ PS+
Sbjct: 73 VNDSETFNFYKNALSAMITEPAMPAMRVNASPVLDQKVCNSDSLSELNDFTKSLIQPSML 132
Query: 203 VVYPQTQSMISPNSYPSATYSFTADFRPPNQSDPLITASSTFKPI-LQNPQKTNHNYAIF 261
+ P+ + +S + S F P+ S + S F + L +P+K+ + I
Sbjct: 133 MCEPKEKP--DASSINTNRSSSDNGFLTPSSSPRSPSCSRVFNAVQLCSPKKSKDD--IT 188
Query: 262 QQKQNFANQKSLAMKRSPSKI 282
K+ + + + + SPSKI
Sbjct: 189 TPKKRLM-EDTYSPRESPSKI 208
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 27.5 bits (58), Expect = 3.8
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 185 QLCSQVQWNQNPSTPSVNVVYPQTQSMISPNSYP--SATYSFTADFRPPNQSDPLITASS 242
Q+ S +QN + PS ++ P S + P SA + F PN S P+ +S
Sbjct: 288 QVASGFSQSQNVNDPS-SIFGPTVASGFGIQNQPQQSAFQNLNTQFSLPNNSQPVFGHTS 346
Query: 243 TFKPILQNPQKTNHNYAIFQQKQ 265
+P+ N QQ Q
Sbjct: 347 LTQPVNPNGFTVQPPATFMQQPQ 369
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 129 HAVVHGDCASEAVHPQVMVNSNGGYPYYEHYGGAPLFPTMSVN 171
+ V G C V PQ + NS G Y GA FPT +N
Sbjct: 251 NTTVGGVCTGLGVPPQRIANSIGVVKAYTTRVGAGPFPTEQLN 293
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 384 HVRTHTGQKPFRCR--SCKKAFSDSSTLTKHLRIHS 417
H+R H C +CKK FS+ + KHL+ HS
Sbjct: 1052 HLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQ-HS 1086
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 385 VRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
VR GQ RC+ C+ + S L H
Sbjct: 223 VRARAGQLELRCKKCRFVLASSDYLVSH 250
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 372 NKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSG 418
N + Q L+ H+ + T Q K F + S +T H +HSG
Sbjct: 855 NSTLVQLKQLSKHLLSETKQDE-SFSELAKIFQEGSNITSHELLHSG 900
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 26.2 bits (55), Expect = 8.9
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 153 YPYYEHYGGAPLFPTMSVNVSMNMTMHG-----CPPDQLCSQVQWNQNPSTPSVNV 203
+PY E FP +N S +T+H PP V NP +PS+ +
Sbjct: 395 FPYVEPNVDRSKFPKSPLNSSQEVTIHSSQDRQSPPSSPLKDVPSQINPFSPSLRL 450
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 26.2 bits (55), Expect = 8.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 368 CGDCNKSFSQAANLTAHVRTHTGQKPFR 395
C CN +F+ + L H T Q PF+
Sbjct: 177 CSKCNTTFNHSTALMMHEATCLNQVPFK 204
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,038,405
Number of Sequences: 5004
Number of extensions: 86453
Number of successful extensions: 291
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 207
Number of HSP's gapped (non-prelim): 69
length of query: 430
length of database: 2,362,478
effective HSP length: 75
effective length of query: 355
effective length of database: 1,987,178
effective search space: 705448190
effective search space used: 705448190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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