Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002234-TA|BGIBMGA002234-PA|IPR007087|Zinc finger,
C2H2-type
(430 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 62 6e-10
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 60 3e-09
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 56 7e-08
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 52 7e-07
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 52 7e-07
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 52 9e-07
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 50 4e-06
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 46 4e-05
03_06_0607 + 35037467-35038624 44 2e-04
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 40 0.004
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 39 0.009
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 39 0.009
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 39 0.009
09_02_0366 + 7941550-7942161,7942230-7942775 38 0.012
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 38 0.012
01_06_1412 - 37140654-37141088,37141549-37142214 38 0.015
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 38 0.020
02_04_0316 - 21978330-21979397 38 0.020
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 37 0.027
12_01_0454 + 3580332-3581714 37 0.036
05_05_0022 + 21592403-21593083,21593720-21594208 37 0.036
01_01_0990 + 7847066-7847478,7847713-7848679 37 0.036
08_02_1602 - 28148255-28149413,28151927-28152087 36 0.047
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 36 0.063
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 36 0.063
06_03_0743 + 24069752-24070483,24071890-24072345 35 0.11
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 35 0.11
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 35 0.11
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 35 0.14
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 34 0.19
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 34 0.25
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 33 0.33
01_06_1495 + 37769982-37771496 33 0.33
01_05_0421 + 21990034-21990392,21991691-21992681 33 0.33
01_05_0380 - 21633505-21634563,21634626-21634677,21636263-216363... 33 0.33
03_04_0188 - 18241815-18242477 33 0.44
09_04_0564 + 18565583-18566449,18569662-18570123 33 0.58
08_02_1172 + 24898290-24899141,24900864-24901328 33 0.58
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 33 0.58
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 32 0.77
11_04_0142 + 14027726-14029081 31 1.8
09_02_0226 - 6007656-6008063,6012166-6012678 31 1.8
07_01_0679 - 5114271-5114402,5115015-5115086,5115168-5115236,511... 31 1.8
01_06_1284 + 35994595-35995074 31 1.8
12_02_0916 - 24271151-24271894 31 2.4
02_05_0202 + 26708049-26709074 31 2.4
04_04_1053 - 30431236-30431428,30431794-30431856,30433497-304336... 30 3.1
03_05_0255 + 22435027-22435072,22436022-22437085 30 3.1
09_04_0324 - 16686872-16687074,16687479-16687521,16687735-166880... 30 4.1
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 30 4.1
03_04_0187 - 18236041-18236643 30 4.1
01_06_1614 - 38648495-38649706 30 4.1
09_01_0106 + 1673737-1674522,1674625-1675089 29 5.4
07_03_1094 + 23919878-23920520,23921297-23921363,23921364-239214... 29 5.4
04_04_0734 + 27648661-27649596 29 5.4
07_03_1104 + 24001594-24002139 29 7.2
06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537... 29 7.2
06_01_0367 - 2636487-2636498,2636655-2636724,2636831-2636937,263... 29 7.2
06_01_0309 - 2233573-2234556,2234670-2234721,2235406-2236391,223... 29 7.2
03_04_0134 - 17593449-17594702 29 7.2
11_08_0006 - 27548581-27549177 29 9.5
11_01_0311 + 2322511-2323527 29 9.5
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 62.5 bits (145), Expect = 6e-10
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGD--CNKSFSQAANLTAHVRTHTGQKPFRCR--S 398
CGKT+ + L+ H H+ ER Y C + C K F ++ L H HTGQK F C
Sbjct: 94 CGKTFVDVAALRKHAHVHN-ERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPG 152
Query: 399 CKKAFSDSSTLTKHLRIHSGEKPYQC 424
C KAFS L HL+ H+ E + C
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVC 178
Score = 54.4 bits (125), Expect = 2e-07
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 321 VQVGALSGCSEDDEQKPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFS 376
V V AL + ++ +C+ CGK + S LK H H+G++ + C C K+FS
Sbjct: 99 VDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFS 158
Query: 377 QAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIH 416
NL +H++TH + C +C K F+ S L H++ H
Sbjct: 159 LDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
Score = 45.2 bits (102), Expect = 1e-04
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 344 GKTYARPSTLKTHLRTHSGERPYRCG--DCNKSFSQAANLTAHVRTHTGQKPFRCRS--C 399
GK P +K T E + C +C K+F A L H H ++ + C+ C
Sbjct: 68 GKAVPEPEAVKPEPTT---EILFLCSYENCGKTFVDVAALRKHAHVHN-ERQYICQEPGC 123
Query: 400 KKAFSDSSTLTKHLRIHSGEKPYQC 424
K F DSS L +H IH+G+K + C
Sbjct: 124 GKKFVDSSKLKRHHLIHTGQKDFIC 148
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 60.5 bits (140), Expect = 3e-09
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQKPFRC--RS 398
CGKT+ L+ H H GER Y C C+K F ++ L H HTG+K F C
Sbjct: 50 CGKTFVDAGALRKHAHVH-GERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEG 108
Query: 399 CKK--AFSDSSTLTKHLRIHSGEKPYQCK 425
C K AFS L H++ HS + + CK
Sbjct: 109 CGKVLAFSLDFNLKAHMKTHSVDNYHVCK 137
Score = 48.0 bits (109), Expect = 1e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 321 VQVGALSGCSEDDEQKPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRC--GDCNK--S 374
V GAL + ++ +C C K + S LK H H+GE+ + C C K +
Sbjct: 55 VDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLA 114
Query: 375 FSQAANLTAHVRTHTGQKPFRCR--SCKKAFSDSSTLTKHLR 414
FS NL AH++TH+ C+ C + F+ S L H++
Sbjct: 115 FSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIK 156
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 55.6 bits (128), Expect = 7e-08
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQKPFRCR 397
C+ CG ++ +P+ LK H+++HS ER + C DC S+ + +L H+ H G K F C
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQG-KLFTCS 120
Query: 398 --SCKKAFSDSSTLTKHLR-IHSGE 419
C + FS + + +H++ IH E
Sbjct: 121 MDGCGRKFSIKANMQRHVKEIHEDE 145
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 360 HSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIHS 417
H G+ + C +C SF + A+L H+++H+ ++ F C C ++ L +H+ H
Sbjct: 56 HEGD--HTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQ 113
Query: 418 GEKPYQCKL 426
G K + C +
Sbjct: 114 G-KLFTCSM 121
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHT---GQKPFRC--R 397
C KT+ L+ H + + +C C + + N+ H+R H + +C
Sbjct: 193 CMKTFTNVECLRAH--NQACHQYVQCDICGEKHLKK-NIKRHLRAHEEVPSTERIKCSFE 249
Query: 398 SCKKAFSDSSTLTKHLRI-HSGEKPYQCK 425
C+ +FS+ S LTKH++ H KP+ C+
Sbjct: 250 GCECSFSNKSNLTKHIKASHDQVKPFACR 278
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 52.4 bits (120), Expect = 7e-07
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 371 CNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIHSGEKPYQCK 425
C K F L H + H ++P +C + CKKAF T+H+R+H+G +PY+C+
Sbjct: 1260 CKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQ 1316
Score = 50.8 bits (116), Expect = 2e-06
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 336 KPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQ 391
K ++C + C K + L H + H ERP +C C K+F T H+R HTG
Sbjct: 1251 KRDICPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGV 1310
Query: 392 KPFRCR--SCKKAFSDSSTLTKHLRI--HSGEK 420
+P+ C+ C + F S ++H R HS +K
Sbjct: 1311 RPYECQEPGCGQTFRFVSDFSRHKRKTGHSSDK 1343
Score = 37.1 bits (82), Expect = 0.027
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 334 EQKPNLC--RICGKTYARPSTLKTHLRTHSGERPYRCGD--CNKSFSQAANLTAHVR 386
+++P C + C K + P H+R H+G RPY C + C ++F ++ + H R
Sbjct: 1279 DERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRHKR 1335
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 371 CNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
C+ SFS +L H R K CKK F L +H ++H E+P +C
Sbjct: 1237 CDMSFSTQQDLLLHKRDICPVK-----GCKKKFFCHKYLLQHRKVHIDERPLKC 1285
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 52.4 bits (120), Expect = 7e-07
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR--SCK 400
C T+ + L+ H R + C K FS L H H ++PF+C C
Sbjct: 801 CDMTFETKAELRAHQRNICTDE-----SCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCP 855
Query: 401 KAFSDSSTLTKHLRIHSGEKPYQC 424
F T+H+R+H+GE+PY+C
Sbjct: 856 MTFKWLWAQTEHIRVHTGERPYKC 879
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 336 KPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVRTHTGQ 391
K N C + CG+ + L+ H H+ + PY+C C+ +F + + H + H G+
Sbjct: 561 KKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGK 620
Query: 392 KPFRCRS--CKKAFSDSSTLTKHLR 414
+P++C + C K + S T+H R
Sbjct: 621 RPYKCTTPGCSKIYKFVSDFTRHKR 645
Score = 42.3 bits (95), Expect = 7e-04
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 371 CNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
C + F L H H P++C C AF S +H ++H+G++PY+C
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKC 625
Score = 32.3 bits (70), Expect = 0.77
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 371 CNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
C +F A L+ H + K SC + F L +H IH+ + PY+C
Sbjct: 547 CRMTFKNRAELSVHKKNTCTVK-----SCGRHFRSHKYLRRHQSIHNDDMPYKC 595
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 50.0 bits (114), Expect = 4e-06
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 371 CNKSFSQAANLTAHVRTHTGQKPFRC--RSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
C K F L H + HT +P C + C AF T+HLR+H+G++PY C
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVC 1171
Score = 38.3 bits (85), Expect = 0.012
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 7/156 (4%)
Query: 250 NPQKTNHNYAIFQQKQNFANQKSLAMKRSPSKIYMQEGHKDQGAGGGFIMNHQTSMHPQD 309
N +H A+ +++ A K P K ++ +G F S+H D
Sbjct: 1050 NANSASHLRAMPPKQKAEAEAKKQIRTPKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSD 1109
Query: 310 Y-DYSACVSAGKVQVGALSGCSEDDEQKPNLC--RICGKTYARPSTLKTHLRTHSGERPY 366
C L + +P C + C + P HLR H+G+RPY
Sbjct: 1110 ICPVKGCGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPY 1169
Query: 367 RCGD--CNKSFSQAANLTAHVRT--HTGQKPFRCRS 398
C + C ++F ++ + H R H+ +K + +S
Sbjct: 1170 VCHEPGCAQTFRFVSDFSRHKRKTGHSVKKKKKAKS 1205
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 46.4 bits (105), Expect = 4e-05
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 298 IMNHQTSMHPQDYDYSACVSAGKVQVGALSGCSEDDEQKPN---LCRICGKTYARPSTLK 354
+ H+ S DY C G ++ C + + + +C +CG T K
Sbjct: 370 LQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCHRHVVCDVCG-TKQLKKNFK 428
Query: 355 THLRTHSGE---RPYRCG--DCNKSFSQAANLTAHVR-THTGQKPFRC--RSCKKAFSDS 406
H R H G RC DC SFS+ +NL HV+ H ++PF C C K+FS
Sbjct: 429 RHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYK 488
Query: 407 STLTKH 412
H
Sbjct: 489 HVRDNH 494
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 335 QKPNLCRI--CGKTYARPSTLKTHLRTHSGERPYRC--GDCNKSFSQAANLTAHVR-TH- 388
Q+P C + C +Y+R L HL TH G + + C CN+ F+ N+ HV+ H
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRHVQEMHK 342
Query: 389 -----TGQKPFRC--RSCKKAFSDSSTLTKHLRIH 416
+K F C +C K F +S L KH H
Sbjct: 343 DGSPCESKKEFICPEENCGKTFKYASKLQKHEESH 377
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 343 CGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQ---KPFRC--R 397
C K + LK H + S R C C N H R H G + RC +
Sbjct: 392 CMKAFTNLECLKAHNK--SCHRHVVCDVCGTK-QLKKNFKRHQRMHEGSCVTERVRCHLK 448
Query: 398 SCKKAFSDSSTLTKHLR-IHSGEKPYQC 424
CK +FS S L KH++ +H ++P+ C
Sbjct: 449 DCKLSFSKKSNLDKHVKAVHEQKRPFVC 476
>03_06_0607 + 35037467-35038624
Length = 385
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 350 PSTLKTHLRTHSGERPYRCGDCN-KSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSST 408
P+ +K H R ++ + C CN K FS A+L H + H G+ + C SC +FS
Sbjct: 241 PTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEK-HCGRDRWVC-SCGTSFSRKDK 298
Query: 409 LTKHLRIHSGEKP 421
L H+ I G P
Sbjct: 299 LFAHVAIFDGHSP 311
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 340 CRICG-KTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
CR C K ++ + L+TH + H G + C C SFS+ L AHV G P
Sbjct: 259 CRRCNVKRFSVVADLRTHEK-HCGRDRWVCS-CGTSFSRKDKLFAHVAIFDGHSP 311
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 338 NLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR 397
+ C +CGK + R + L+ H+R H GE K + A ++ + C
Sbjct: 164 HFCGVCGKGFKRDANLRMHMRGH-GEEYKSAAALAKPGGSPSRSPAAADAAARRRFYSCP 222
Query: 398 --SCK-----KAFSDSSTLT---KHLRIHSGEKPYQCKLC 427
CK K+F T T H R +K + C+ C
Sbjct: 223 YVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRC 262
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAH 384
C+ CGK YA + LK H +T G R YRC DC F++ + H
Sbjct: 139 CQRCGKRYAVQADLKAHTKT-CGTREYRC-DCGTLFTRRDSFVTH 181
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ + C C K ++ A+L AH +T G + +RC C F+ + H
Sbjct: 124 IKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKT-CGTREYRC-DCGTLFTRRDSFVTH 181
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ +RC C K ++ ++ AHV+ + G + +RC C FS +L H
Sbjct: 111 IKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK-NCGTREYRC-DCGILFSRKDSLLTH 168
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAH 384
C CGK YA S K H++ + G R YRC DC FS+ +L H
Sbjct: 126 CERCGKRYAVHSDWKAHVK-NCGTREYRC-DCGILFSRKDSLLTH 168
Score = 33.9 bits (74), Expect = 0.25
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC-- 396
+C +C K + R L+ H R H+ R S A R + +P C
Sbjct: 40 VCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAPRKRVYVCPEP-TCVH 98
Query: 397 RSCKKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+A D + + KH GEK ++C+ C
Sbjct: 99 HDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 370 DCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLL 429
D ++ + H G+K +RC C K ++ S H++ + G + Y+C +L
Sbjct: 100 DPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK-NCGTREYRCDCGIL 158
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 353 LKTHLRT-HSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
+K H R HSG R + C C+K+++ ++ AH++T G + C C + FS + +
Sbjct: 130 IKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKT-CGTRGHSC-DCGRVFSRVESFIE 187
Query: 412 H 412
H
Sbjct: 188 H 188
Score = 35.9 bits (79), Expect = 0.063
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRT 387
C C K YA S K HL+T G R + C DC + FS+ + H T
Sbjct: 146 CARCSKAYAVHSDYKAHLKT-CGTRGHSC-DCGRVFSRVESFIEHQDT 191
Score = 29.9 bits (64), Expect = 4.1
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 339 LCRICGKTYARPSTLKTHLRTH----------SGE----RPYRC-------GDCNKSFSQ 377
+C IC + + R L+ H R H +GE R + C D + +
Sbjct: 67 VCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGD 126
Query: 378 AANLTAHV-RTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H R H+G + + C C KA++ S HL+ G + + C
Sbjct: 127 LVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKT-CGTRGHSC 173
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 353 LKTHLRT-HSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
+K H R HSG R + C C+K+++ ++ AH++T G + C C + FS + +
Sbjct: 129 IKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKT-CGTRGHTC-DCGRVFSRVESFIE 186
Query: 412 H 412
H
Sbjct: 187 H 187
Score = 35.5 bits (78), Expect = 0.083
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAH 384
C C K YA S K HL+T G R + C DC + FS+ + H
Sbjct: 145 CSRCSKAYAVHSDYKAHLKT-CGTRGHTC-DCGRVFSRVESFIEH 187
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 339 LCRICGKTYARPSTLKTHLRTH----------SGE----RPYRC-------GDCNKSFSQ 377
+C IC + + R L+ H R H +GE R + C D + +
Sbjct: 66 VCEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGD 125
Query: 378 AANLTAHV-RTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H R H+G + + C C KA++ S HL+ G + + C
Sbjct: 126 LVGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKT-CGTRGHTC 172
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 38.3 bits (85), Expect = 0.012
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH R G RPY C C K F+ + H + + G+ F C C F +L
Sbjct: 265 TLQTHYRRKHGARPYACRRCGKRFAVRGDWRTHEK-NCGKLWF-C-VCGSDFKHKRSLKD 321
Query: 412 HLRIHSG 418
H+R G
Sbjct: 322 HVRSFGG 328
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTG 390
+P CR CGK +A +TH + + + C C F +L HVR+ G
Sbjct: 277 RPYACRRCGKRFAVRGDWRTHEKNCG--KLWFC-VCGSDFKHKRSLKDHVRSFGG 328
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 38.3 bits (85), Expect = 0.012
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH +T G + +RC C FS + H
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT-CGSREYRC-DCGTLFSRRDSFITH 168
Score = 33.1 bits (72), Expect = 0.44
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 339 LCRICGKTYARPSTLKTHLRTH---------SGE----RPYRCG-------DCNKSFSQA 378
+C IC K + R L+ H R H SG+ R Y C D +++
Sbjct: 49 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALGDL 108
Query: 379 ANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K ++C C K ++ S H + G + Y+C
Sbjct: 109 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT-CGSREYRC 153
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 37.9 bits (84), Expect = 0.015
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + G +P+RC C K F+ + H + + G++ F C +C F +L
Sbjct: 276 TLQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSLND 332
Query: 412 HLR 414
H+R
Sbjct: 333 HVR 335
Score = 36.3 bits (80), Expect = 0.047
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCG-DCNKSFSQAANLTAHVR-THTGQKPFRC 396
+C +C KT+ R + ++ H+ H R YR G + K A L G K
Sbjct: 207 ICHVCNKTFNRYNNMQMHMWGHG--REYRKGPESLKGTQTLAMLKLPCYCCAAGCKNNVA 264
Query: 397 RSCKKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+ D TL H + G KP++C+ C
Sbjct: 265 HPRARPLKDFRTLQTHYKRKHGAKPFRCRRC 295
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRT 387
KP CR C K +A +TH + G+R + C C F +L HVR+
Sbjct: 288 KPFRCRRCAKPFAVKGDWRTH-EKNCGKR-WFCA-CGSDFKHKRSLNDHVRS 336
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ +RC C+K ++ ++ AH +T G + +RC C FS + H
Sbjct: 111 IKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKT-CGTREYRC-DCGTLFSRRDSFITH 168
Score = 36.7 bits (81), Expect = 0.036
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 329 CSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAH 384
C + E+K C C K YA S K H +T G R YRC DC FS+ + H
Sbjct: 116 CRKHGEKKWR-CDKCSKRYAVQSDWKAHSKT-CGTREYRC-DCGTLFSRRDSFITH 168
Score = 32.3 bits (70), Expect = 0.77
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 21/106 (19%)
Query: 339 LCRICGKTYARPSTLKTHLRTH-------------SGERPYRC-------GDCNKSFSQA 378
+C +C K + R L+ H R H + R Y C D +++
Sbjct: 49 VCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALGDL 108
Query: 379 ANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K +RC C K ++ S H + G + Y+C
Sbjct: 109 TGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKT-CGTREYRC 153
>02_04_0316 - 21978330-21979397
Length = 355
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 354 KTHLRTHSGERPYRCGDCN--KSFSQAANLTAHVRTHTGQKP-FRCRSCKKAFSDSSTLT 410
+ H R + Y C C K F+ A+L +H+R H G++ +RC SC FS L
Sbjct: 218 RNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLR-HCGEEAQWRC-SCGTTFSRKDKLF 275
Query: 411 KHLRIHSGEKP 421
HL + G P
Sbjct: 276 GHLALFEGHTP 286
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 340 CRICG--KTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
C CG K +A + L++HLR E +RC C +FS+ L H+ G P
Sbjct: 232 CERCGGKKRFAVLADLRSHLRHCGEEAQWRC-SCGTTFSRKDKLFGHLALFEGHTP 286
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 307 PQDYDYSACVSAGKVQVGALSGCSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGER 364
PQ+ A G V L SE + + C ICGK + R + L+ H+R H G+R
Sbjct: 114 PQEPPQEAAKGDGDYDVVELDA-SELLAEHVHFCDICGKGFRRDANLRMHMRAH-GDR 169
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 37.1 bits (82), Expect = 0.027
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH + G K +RC C FS + H
Sbjct: 129 IKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI-CGTKEYRC-DCGTIFSRKDSFITH 186
Score = 34.3 bits (75), Expect = 0.19
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 21/106 (19%)
Query: 339 LCRICGKTYARPSTLKTHLRTHS-------------GERPYRCG-------DCNKSFSQA 378
+C +C K + R L+ H R H+ ++ Y C D ++
Sbjct: 67 ICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCPEITCPHHDATRALGDL 126
Query: 379 ANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K ++C C K ++ S H +I G K Y+C
Sbjct: 127 TGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI-CGTKEYRC 171
>12_01_0454 + 3580332-3581714
Length = 460
Score = 36.7 bits (81), Expect = 0.036
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 335 QKPNLCRICG-KTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
+K ++C CG K ++ + LKTH + H G + C C SFS+ L AHV G P
Sbjct: 311 EKRHVCGRCGAKRFSVMADLKTHEK-HCGRDRWLCS-CGTSFSRKDKLFAHVALFQGHAP 368
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 331 EDDEQKPN--LCRICGKTYARPSTLKTHLRTHSGE 363
ED+ P+ C ICGK + R + L+ H+R H E
Sbjct: 215 EDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDE 249
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 368 CGDCNKSFSQAANLTAHVRTH 388
CG C K F + ANL H+R H
Sbjct: 226 CGICGKGFKRDANLRMHMRGH 246
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 36.7 bits (81), Expect = 0.036
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + G +P+ C C K F+ + H + + G++ F C +C F +L
Sbjct: 284 TLQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSLND 340
Query: 412 HLRIHSG 418
H+R G
Sbjct: 341 HVRSFGG 347
Score = 36.3 bits (80), Expect = 0.047
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRS 398
+C +C K + R + ++ H+ H R YR G + +QA A ++ CR+
Sbjct: 212 VCHVCNKAFNRYNNMQMHMWGHG--REYRKGPESLKGTQATATLAMLKLPCYCCAAGCRN 269
Query: 399 C-----KKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+ D TL H + G KP+ C+ C
Sbjct: 270 NVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRC 303
Score = 32.3 bits (70), Expect = 0.77
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTG 390
KP CR C K +A +TH + G+R + C C F +L HVR+ G
Sbjct: 296 KPFACRRCAKPFAVKGDWRTH-EKNCGKR-WFCA-CGSDFKHKRSLNDHVRSFGG 347
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 36.7 bits (81), Expect = 0.036
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH +T G + +RC C FS + H
Sbjct: 88 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC-DCGTLFSRRDSFITH 145
Score = 35.9 bits (79), Expect = 0.063
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 339 LCRICGKTYARPSTLKTHLRTH---------SGERP----YRCGD--C-----NKSFSQA 378
+C ICGK + R L+ H R H SG+ P Y C + C +++
Sbjct: 26 VCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALGDL 85
Query: 379 ANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K ++C C K ++ S H + G + Y+C
Sbjct: 86 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC 130
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 36.3 bits (80), Expect = 0.047
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 336 KPNLCRICG-KTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP 393
K +C CG K ++ S L+TH + H G+ + C C SFS+ L HV G +P
Sbjct: 348 KMYVCNRCGRKHFSVLSDLRTHEK-HCGDHRWLCS-CGTSFSRKDKLIGHVSLFAGHQP 404
Score = 35.9 bits (79), Expect = 0.063
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 354 KTHLRTHSGERPYRCGDCN-KSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
K H + + Y C C K FS ++L H + H G + C SC +FS L H
Sbjct: 338 KNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHEK-HCGDHRWLC-SCGTSFSRKDKLIGH 395
Query: 413 LRIHSGEKP 421
+ + +G +P
Sbjct: 396 VSLFAGHQP 404
Score = 32.3 bits (70), Expect = 0.77
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGE 363
C++CGK + R + L+ H+R H E
Sbjct: 260 CQVCGKGFKRDANLRMHMRAHGDE 283
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 35.9 bits (79), Expect = 0.063
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 361 SGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+ +R Y C +C+K+FS L HV H QK ++A + ++ + +H
Sbjct: 458 ASKRKYECSECHKTFSTHQALGGHVAAHKRQKKSCAEQQQEAVAAAAQVARH 509
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 35.9 bits (79), Expect = 0.063
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 329 CSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAH 384
C + E+K C CGK YA S K H + G R Y+C DC FS+ + H
Sbjct: 156 CRKHGEKKWK-CDRCGKRYAVHSDWKAHSKV-CGTREYKC-DCGTVFSRRDSFVTH 208
Score = 33.5 bits (73), Expect = 0.33
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC-- 396
+C ICGK + R L+ H R H+ P++ + R + + C
Sbjct: 82 VCEICGKGFQRDQNLQLHRRGHN--LPWKLRQRGGAGGGGGGEPPRKRVYVCPEA-SCVH 138
Query: 397 RSCKKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
S +A D + + KH GEK ++C C
Sbjct: 139 HSPSRALGDLTGIKKHFCRKHGEKKWKCDRC 169
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C K ++ ++ AH + G + ++C C FS + H
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKV-CGTREYKC-DCGTVFSRRDSFVTH 208
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + G +P+ C C K+F+ + H + + G K + C +C F +L
Sbjct: 298 TLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYC-ACGSDFKHKRSLKD 354
Query: 412 HLR 414
H+R
Sbjct: 355 HIR 357
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVR 386
KP +CR CGK +A +TH + G+ Y C C F +L H+R
Sbjct: 310 KPFMCRKCGKAFAVRGDWRTH-EKNCGKLWY-CA-CGSDFKHKRSLKDHIR 357
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSC 399
C +C KT+ R + ++ H+ H + YR G + +Q TA +R CR+
Sbjct: 230 CPVCYKTFNRYNNMQMHMWGHGSQ--YRKGPESLRGTQP---TAMLRLPCYCCAAGCRNN 284
Query: 400 -----KKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+ D TL H + G KP+ C+ C
Sbjct: 285 IDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKC 317
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 353 LKTHLRT-HSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
+K H R H G R + C C K ++ ++ AH++T G + C C + F S +T+
Sbjct: 117 IKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHLKT-CGTRGHSC-DCGRVF--SRKITR 172
Query: 412 HLRIHS 417
L ++S
Sbjct: 173 SLNLYS 178
Score = 33.1 bits (72), Expect = 0.44
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQ 377
+C C K YA S K HL+T G R + C DC + FS+
Sbjct: 132 VCARCAKGYAVQSDYKAHLKT-CGTRGHSC-DCGRVFSR 168
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH + G + +RC C FS + H
Sbjct: 138 IKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV-CGTREYRC-DCGTLFSRRDSFITH 195
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRS 398
+C ICGK + R L+ H R H+ P++ N + +V G
Sbjct: 75 VCEICGKGFQRDQNLQLHRRGHN--LPWKLKQRNP--KEVVRKKVYVCPEAGCVH---HD 127
Query: 399 CKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLR 430
+A D + + KH GEK ++C C R
Sbjct: 128 PARALGDLTGIKKHFSRKHGEKKWKCDKCSKR 159
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 34.7 bits (76), Expect = 0.14
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 395 RCRSCKKAFSDSSTLTKHLRIHSGEK 420
+C+ C K FS S +L +H+ +H GEK
Sbjct: 179 QCQMCSKVFSTSGSLREHMMMHGGEK 204
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 295 GGFIMNHQTSMHPQDYDYSACVSAGKVQVGALSGCSEDDEQKP--NLCRICGKTYARPST 352
GG + H+ S+ Q S+ + + + LS C ++ P C++C K ++ +
Sbjct: 134 GGHMSCHR-SVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLLLPPETQCQMCSKVFSTSGS 192
Query: 353 LKTHLRTHSGER 364
L+ H+ H GE+
Sbjct: 193 LREHMMMHGGEK 204
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 363 ERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR 397
+ +RC C KSF L H+R H +K R R
Sbjct: 380 DNSHRCNTCGKSFGSGQALGGHMRRHYVRKCNRQR 414
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH + G + +RC C FS + H
Sbjct: 107 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRC-DCGTLFSRRDSFITH 164
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRC-- 396
+C +C K + R L+ H R H+ P++ N + +Q R + +P C
Sbjct: 44 VCEVCNKGFQREQNLQLHRRGHN--LPWKLKQKNPAQAQRR------RVYLCPEP-TCVH 94
Query: 397 RSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLR 430
+A D + + KH GEK ++C C R
Sbjct: 95 HDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKR 128
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 33.9 bits (74), Expect = 0.25
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 14/106 (13%)
Query: 322 QVGALSGCSEDDEQ-KPNL-CRICGKTYARPSTLKTH-LRTHSGE-----RPYRCGDCNK 373
Q G++ ED P L C+IC + ++ L H H E R Y C C
Sbjct: 445 QDGSVMVLREDGTHPSPGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMD 504
Query: 374 SFSQAANLTAHVRTHTGQK------PFRCRSCKKAFSDSSTLTKHL 413
SF+ L HV+ G + RC SC F ++ L +H+
Sbjct: 505 SFTNRRVLERHVQEKHGAQYLQYSTLLRCISCNSNFLNTDLLWQHI 550
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 33.5 bits (73), Expect = 0.33
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH R G R + C C K F+ + H + + G + +RC +C F +L
Sbjct: 234 TLQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEK-NCG-RLWRC-ACGAHFRHKRSLND 290
Query: 412 HLR 414
H R
Sbjct: 291 HAR 293
Score = 32.7 bits (71), Expect = 0.58
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSC 399
C +C KT+ R + L+ H+ H + YR G + + A TA +R CR+
Sbjct: 165 CPVCRKTFNRYNNLQMHMWGHGSQ--YRRG--GTAALRGAQPTAMLRLPCYCCAAGCRNH 220
Query: 400 -----KKAFSDSSTLTKHLRIHSGEKPYQCKLCLLR 430
+ D TL H R G + + C+ C R
Sbjct: 221 IDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKR 256
>01_06_1495 + 37769982-37771496
Length = 504
Score = 33.5 bits (73), Expect = 0.33
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 338 NLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCR 397
+ C ICGK + R + L+ H+R H E Y+ S+ ++L + T C+
Sbjct: 264 HFCLICGKGFKRDANLRMHMRGHGDE--YKTAAALAKPSKDSSLESAPVTRYSCPYVGCK 321
Query: 398 SCK--KAFSDSSTL---TKHLRIHSGEKPYQCKLC 427
K K F T+ H + +K Y C C
Sbjct: 322 RNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRC 356
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 33.5 bits (73), Expect = 0.33
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 22/107 (20%)
Query: 339 LCRICGKTYARPSTLKTHLRTHS--------------GERPYRCG-------DCNKSFSQ 377
+C ICGK + R L+ H R H+ ++ Y C D +++
Sbjct: 7 VCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDPSRALGD 66
Query: 378 AANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K ++C C K ++ S H +I G + Y+C
Sbjct: 67 LTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI-CGTREYKC 112
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKH 412
+K H GE+ ++C C+K ++ ++ AH + G + ++C C FS + H
Sbjct: 70 IKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI-CGTREYKC-DCGTIFSRRDSFITH 127
>01_05_0380 -
21633505-21634563,21634626-21634677,21636263-21636310,
21636349-21637289,21638737-21638982
Length = 781
Score = 33.5 bits (73), Expect = 0.33
Identities = 22/73 (30%), Positives = 32/73 (43%)
Query: 154 PYYEHYGGAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVNVVYPQTQSMIS 213
P+ + GAP PTM +N ++ P L S V+ ++PS P Q M
Sbjct: 625 PHQPQHMGAPGTPTMPMNYFPPFSVPVMNPVALASAVEQGRHPSMPQPYGNLEQHSRMSC 684
Query: 214 PNSYPSATYSFTA 226
S+PS + F A
Sbjct: 685 NMSHPSGIWRFHA 697
>03_04_0188 - 18241815-18242477
Length = 220
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTA-------HVRTHTGQK 392
C +CGK +A L H +H +P GD + + A L + + G
Sbjct: 75 CTVCGKAFASYQALGGHKSSH--RKPPSPGDHYGAAAAAQQLASAGDSKEDSASSAAGST 132
Query: 393 -PFRCRSCKKAFSDSSTLTKHLRIH 416
P RC C+++F+ L H R H
Sbjct: 133 GPHRCTICRRSFATGQALGGHKRCH 157
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + G +P+ C C K+F+ + H + + G K + C C F +L
Sbjct: 343 TLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LCGSEFKHKRSLKD 399
Query: 412 HLR 414
H R
Sbjct: 400 HAR 402
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 373 KSFSQAANLTAHVRTHTGQKPFRCRSCKKAFS 404
K L H + G KPF CR C KAF+
Sbjct: 336 KPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFA 367
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVR 386
KP LCR CGK +A +TH + G+ Y C C F +L H R
Sbjct: 355 KPFLCRKCGKAFAVKGDWRTH-EKNCGKLWY-C-LCGSEFKHKRSLKDHAR 402
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + G +P+ C C K+F+ + H + + G K + C C F +L
Sbjct: 338 TLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LCGSEFKHKRSLKD 394
Query: 412 HLR 414
H R
Sbjct: 395 HAR 397
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVR 386
KP LCR CGK +A +TH + G+ Y C C F +L H R
Sbjct: 350 KPFLCRKCGKAFAVKGDWRTH-EKNCGKLWY-C-LCGSEFKHKRSLKDHAR 397
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 353 LKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFS 404
+K H GE+ ++C C+K ++ ++ AH + G + +RC C FS
Sbjct: 159 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRC-DCGTLFS 208
Score = 32.3 bits (70), Expect = 0.77
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 22/107 (20%)
Query: 339 LCRICGKTYARPSTLKTHLRTHS--------------GERPYRC-------GDCNKSFSQ 377
+C +C K + R L+ H R H+ R Y C D +++
Sbjct: 96 VCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRRVYLCPEPTCVHHDPSRALGD 155
Query: 378 AANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIHSGEKPYQC 424
+ H G+K ++C C K ++ S H +I G + Y+C
Sbjct: 156 LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI-CGTREYRC 201
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 32.3 bits (70), Expect = 0.77
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGE 363
C++CGK + R + L+ H+R H E
Sbjct: 324 CQVCGKGFKRDANLRMHMRAHGDE 347
>11_04_0142 + 14027726-14029081
Length = 451
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 369 GDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTKHLRIH 416
G + + AA A + ++ F CR C+K F + H+R+H
Sbjct: 92 GSAIVAIASAAAAAAAAASTMAREVFACRICRKEFDTRKAVDGHMRVH 139
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 336 KPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVR 386
KP CR CGK A +TH + G R + C C F +L H+R
Sbjct: 237 KPFACRKCGKPLAVRGDWRTH-EKNCGRR-WHCA-CGSDFKHKRSLKDHIR 284
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 352 TLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSCKKAFSDSSTLTK 411
TL+TH + +P+ C C K + + H + + G++ + C +C F +L
Sbjct: 225 TLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEK-NCGRR-WHC-ACGSDFKHKRSLKD 281
Query: 412 HLR 414
H+R
Sbjct: 282 HIR 284
Score = 29.5 bits (63), Expect = 5.4
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSC 399
C +C KT++R + L+ H+ H + YR G + +Q A A +R CR+
Sbjct: 157 CPVCCKTFSRYNNLQMHMWGHGSQ--YRRGPESLRGTQPA---AMLRLPCFCCAAGCRNN 211
Query: 400 -----KKAFSDSSTLTKHLRIHSGEKPYQCKLC 427
+ D TL H + KP+ C+ C
Sbjct: 212 VDHPRARPLKDFRTLQTHYKRKHCAKPFACRKC 244
>07_01_0679 -
5114271-5114402,5115015-5115086,5115168-5115236,
5115356-5115421,5115619-5115822,5116715-5116942
Length = 256
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 280 SKIYMQEGHKDQGAGGGFIMNHQTSMHPQDYDYSACVSAGKVQVGALSGCSEDDEQKPNL 339
S + +G +G GG ++ P+D D S VS G G + D +
Sbjct: 24 SSVVTDQGSGSRGGGGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKR 83
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLT-AHVRTHTGQ 391
+ K+ + +L+T T SG + D N + + HVR GQ
Sbjct: 84 LKPM-KSSDKNDSLRTEAGTDSGNSS-KAADKNATPPEPPKQDYIHVRARRGQ 134
>01_06_1284 + 35994595-35995074
Length = 159
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 325 ALSGCSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGE 363
A + +E D + + C +CG ++ L H+R H GE
Sbjct: 71 AAAAAAERDRARVHECAVCGVEFSMGQALGGHMRRHRGE 109
>12_02_0916 - 24271151-24271894
Length = 247
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNK--------SFSQAANLTAHVRTHTGQ 391
C +CGK +A L H +H P D ++ + + ++ + V G
Sbjct: 93 CSVCGKAFASYQALGGHKASHRKPPPPAMVDDDEVVVETKPAAIATPSSSASGVSGGGGG 152
Query: 392 KPFRCRSCKKAFSDSSTLTKHLRIH 416
+ C C KAF L H R H
Sbjct: 153 RAHECNVCGKAFPTGQALGGHKRCH 177
>02_05_0202 + 26708049-26709074
Length = 341
Score = 30.7 bits (66), Expect = 2.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 338 NLCRICGKTYARPSTLKTHLRTHS 361
N C++C + +A P L H+R+HS
Sbjct: 4 NACKLCYRRFASPRALAGHMRSHS 27
>04_04_1053 -
30431236-30431428,30431794-30431856,30433497-30433615,
30433696-30433797,30434588-30434677,30434851-30435141,
30435218-30435373,30435466-30435699
Length = 415
Score = 30.3 bits (65), Expect = 3.1
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 MSVNVS-MNMTMHGCPPDQLCSQVQWNQNPS-TPSVNVVYPQTQSMISPNSYPSATYSFT 225
MS +VS + + + PP L + +W + + PS +V + S +P SY SA
Sbjct: 1 MSSSVSSVRLPLRAAPP--LYGRREWRADGARAPSPALVAVKPLSCRAPASYRSALLLH- 57
Query: 226 ADFRPPNQSDPLITASSTFKPILQNPQK 253
R + P + A++T KP+L++P+K
Sbjct: 58 ---RRRRYALPPVAATATSKPVLKDPKK 82
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 340 CRICGKTYARPSTLKTHLRTHS 361
CR+CGK A S L H+++HS
Sbjct: 279 CRLCGKVLASGSALGGHMKSHS 300
>09_04_0324 -
16686872-16687074,16687479-16687521,16687735-16688068,
16688190-16688854
Length = 414
Score = 29.9 bits (64), Expect = 4.1
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 210 SMISPNSYPSATYSFTADFRPPNQSDPLITASSTFKPILQNPQ-KTNHNYAIFQQKQNFA 268
S I P Y T+S ADF P ++P +T F ++ N + +Y++ +
Sbjct: 150 SRIGPCLYVIDTFSAAADFLPDRNTNPGLT---NFALVVHNHEGVVARSYSVMELVLEAD 206
Query: 269 NQKSLAMKRSPSKIYMQEGHKDQGAGGGFIMNHQTSMHPQDYD--YSACVSAGKVQVGAL 326
+ K+ + S + EG ++ + +H ++ + S CVS GK+ A+
Sbjct: 207 SNKAQLWEFSSASGVCAEGEEELS-----MTLLPDGLHAEEVETLSSVCVSEGKITYVAV 261
Query: 327 SG 328
SG
Sbjct: 262 SG 263
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 339 LCRICGKTYARPSTLKTHLRTHSGERPYRC-GDCNKSFSQAANLTAHVRTHTGQKPFRCR 397
LC C + S+L +H + YR + F L VR+ + +C
Sbjct: 56 LCLFCSARFDSESSLFSHCASEHRFDFYRVVKETGMDFYGCIKLINFVRSKVAEN--KCW 113
Query: 398 SCKKAFSDSSTLTKHLRIHSGEKP 421
SC + FS +S L HL H+ E P
Sbjct: 114 SCGQVFSSNSELCGHL--HALEIP 135
>03_04_0187 - 18236041-18236643
Length = 200
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 340 CRICGKTYARPSTLKTHLRTH----SGERPYRCGDCNKSFSQAANLTAHVRTHT-GQKPF 394
C +CGK + L H +H + P D S ++ T T G
Sbjct: 50 CSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTTTTSGGGRH 109
Query: 395 RCRSCKKAFSDSSTLTKHLRIH 416
RC C + F+ L H R H
Sbjct: 110 RCSVCHRTFATGQALGGHKRCH 131
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 354 KTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKP---FRCRSCKKAFSDSSTLT 410
K RTH G + G N+ QAA A + +G +P C++C K FS L
Sbjct: 253 KGEYRTHQGLGGHVAGHINRE-KQAA---AAAQGGSGARPEGNHPCKTCGKEFSTGVALG 308
Query: 411 KHLRIHSGEK 420
H+R H K
Sbjct: 309 GHMRKHYDPK 318
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 316 VSAGKVQVGALSGCSEDDEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGD 370
VS K +L + + P CR CG ++ L H+++H+ + R GD
Sbjct: 287 VSVAKEATRSLVSSARQSRRGPYECRKCGTMFSSGQALGWHMKSHNSDE--RWGD 339
>07_03_1094 +
23919878-23920520,23921297-23921363,23921364-23921453,
23922220-23922284,23922372-23922470,23922851-23922992,
23923100-23923139
Length = 381
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/77 (22%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 340 CRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCRSC 399
C +CGK Y L H +H + + + H RC C
Sbjct: 89 CSVCGKVYGSYQALGGHKTSHRKPPSPAAEPAAGEEPSSGGVAGEAKVH------RCSIC 142
Query: 400 KKAFSDSSTLTKHLRIH 416
+ F L H R+H
Sbjct: 143 LRTFPSGQALGGHKRLH 159
>04_04_0734 + 27648661-27649596
Length = 311
Score = 29.5 bits (63), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 338 NLCRICGKTYARPSTLKTHLRTHS 361
N C++C + + P L H+R+HS
Sbjct: 4 NTCKLCYRRFGNPRALAGHMRSHS 27
>07_03_1104 + 24001594-24002139
Length = 181
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 313 SACVSAGKVQVGALSGCSEDDEQKPNLCRICGKTYARPSTLKTHLRTH 360
+A S+G+V A + D ++ ++C +C + +A L H R H
Sbjct: 69 AAPASSGRVAADADAASEADGRRRRHVCSLCRRGFATGQALGGHKRFH 116
>06_01_0730 +
5370575-5370761,5371395-5371438,5372057-5372204,
5372289-5372397,5373349-5373863,5374571-5374808,
5375296-5375560,5375740-5375844,5375950-5376015,
5376562-5377020,5377267-5377464,5378149-5378211
Length = 798
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 141 VHPQVMVNSNGGYPYY--EHYGGAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPST 198
VHPQVM + + GYP E +F N +++ + P + Q+Q P
Sbjct: 527 VHPQVMASPSQGYPSENPEADNAVQVFRIPESN-AISSQIVSSSPVAISQQLQHMSQPQQ 585
Query: 199 PSVNVVYPQTQSMISPNSYPSATYSFTADFRPP 231
+ +YP PN P + ++ + PP
Sbjct: 586 AA--QLYPPVHMQHYPNFMPYRHHIYSPVYVPP 616
>06_01_0367 -
2636487-2636498,2636655-2636724,2636831-2636937,
2637208-2637226,2637383-2637470,2638175-2638303,
2638428-2638506,2639658-2639720,2640437-2640535,
2641583-2641740,2642926-2643094,2643174-2643239
Length = 352
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 137 ASEAVHPQVMVNSNGGYPYYEHYGGA 162
AS A++ ++N +GG YY+ YG A
Sbjct: 2 ASAAIYSLFIINKSGGLIYYKDYGSA 27
>06_01_0309 -
2233573-2234556,2234670-2234721,2235406-2236391,
2237790-2238050
Length = 760
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 154 PYYEHYGGAPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVNVVYPQTQSMIS 213
P+ + GAP P+M +N ++ P V+ ++PS P + Q QS IS
Sbjct: 606 PHQPQHMGAPGPPSMPMNYFPPFSIPVMNPTAPAPVVEQGRHPSMPQPYGNFEQ-QSWIS 664
Query: 214 PN-SYPSATYSFTA 226
N S+PS + F A
Sbjct: 665 CNMSHPSGIWRFHA 678
>03_04_0134 - 17593449-17594702
Length = 417
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 340 CRICGKTYARPSTLKTHLRTHS 361
C++CGK +A +L H+R+HS
Sbjct: 19 CKVCGKGFACGRSLGGHMRSHS 40
>11_08_0006 - 27548581-27549177
Length = 198
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 212 ISPNSYPSATYSFTADFRPPNQSDPLIT---ASSTFKPILQNPQKTNHNYAI 260
ISP+ P+ +S PP S PL+T AS++ P Q T+H Y I
Sbjct: 10 ISPSFLPTLFFSPHYPLNPPTPSPPLLTSLIASNSLSPSTQ--LLTSHTYPI 59
>11_01_0311 + 2322511-2323527
Length = 338
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 166 PTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPSTPSVN 202
PT+SV VS T+ P L ++ W +P P+++
Sbjct: 57 PTLSVTVSYRATLLAAPAPPLQLRLTWGHSPLGPTLS 93
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.131 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,779,917
Number of Sequences: 37544
Number of extensions: 603132
Number of successful extensions: 1756
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1474
Number of HSP's gapped (non-prelim): 243
length of query: 430
length of database: 14,793,348
effective HSP length: 84
effective length of query: 346
effective length of database: 11,639,652
effective search space: 4027319592
effective search space used: 4027319592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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