GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002233-TA|BGIBMGA002233-PA|undefined
         (179 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        26   0.15 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   2.5  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 32  PAIQEPNGLVRSDGKRPDGMSIIPWKMRRSLVRDATCVDTMAPT 75
           P +  P    R +  + +  SI  W++R  LV++  C  + AP+
Sbjct: 110 PRVATPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRSTAPS 153


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 9   YHFELEFYVVLRVSGKKLVP 28
           YHF LE Y VL  + +   P
Sbjct: 123 YHFTLELYTVLGAACQVCTP 142


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 9   YHFELEFYVVLRVSGKKLVP 28
           YHF LE Y VL  + +   P
Sbjct: 123 YHFTLELYTVLGAACQVCTP 142


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,589
Number of Sequences: 317
Number of extensions: 916
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 179
length of database: 114,650
effective HSP length: 53
effective length of query: 126
effective length of database: 97,849
effective search space: 12328974
effective search space used: 12328974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)