GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002233-TA|BGIBMGA002233-PA|undefined
         (179 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   9.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   9.5  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 9   YHFELEFYVVLRVSGKKLVP 28
           YHF +E+Y VL  + +   P
Sbjct: 166 YHFTVEYYTVLGAACQVCTP 185


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 9   YHFELEFYVVLRVSGKKLVP 28
           YHF +E+Y VL  + +   P
Sbjct: 166 YHFTVEYYTVLGAACQVCTP 185


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,209
Number of Sequences: 2123
Number of extensions: 4345
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 179
length of database: 516,269
effective HSP length: 60
effective length of query: 119
effective length of database: 388,889
effective search space: 46277791
effective search space used: 46277791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)